data_1HDX
#
_model_server_result.job_id            9p6EIp7tLucoNGtrujqe1A 
_model_server_result.datetime_utc      '2024-11-23 03:01:25' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1hdx 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":376}' 
#
_entry.id    1HDX 
#
_exptl.entry_id    1HDX 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              65.409 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ZINC ION' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         92.29 
_cell.angle_beta          103.37 
_cell.angle_gamma         68.97 
_cell.entry_id            1HDX 
_cell.length_a            54.58 
_cell.length_b            44.94 
_cell.length_c            94.3 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1HDX 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 G N N 
? 2 H N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 46 A CYS 46 1_555 D ZN ZN . A ZN 376 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.338 ? 
metalc ? metalc2 A NE2 HIS 67 A HIS 67 1_555 D ZN ZN . A ZN 376 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.223 ? 
metalc ? metalc3 A SG CYS 97 A CYS 97 1_555 C ZN ZN . A ZN 375 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.42 ? 
metalc ? metalc4 A SG CYS 100 A CYS 100 1_555 C ZN ZN . A ZN 375 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.358 ? 
metalc ? metalc5 A SG CYS 103 A CYS 103 1_555 C ZN ZN . A ZN 375 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.268 ? 
metalc ? metalc6 A SG CYS 111 A CYS 111 1_555 C ZN ZN . A ZN 375 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.19 ? 
metalc ? metalc7 A SG CYS 174 A CYS 174 1_555 D ZN ZN . A ZN 376 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.163 ? 
metalc ? metalc8 B SG CYS 46 B CYS 46 1_555 H ZN ZN . B ZN 376 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.434 ? 
metalc ? metalc9 B NE2 HIS 67 B HIS 67 1_555 H ZN ZN . B ZN 376 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.285 ? 
metalc ? metalc10 B SG CYS 97 B CYS 97 1_555 G ZN ZN . B ZN 375 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.345 ? 
metalc ? metalc11 B SG CYS 100 B CYS 100 1_555 G ZN ZN . B ZN 375 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.384 ? 
metalc ? metalc12 B SG CYS 103 B CYS 103 1_555 G ZN ZN . B ZN 375 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.21 ? 
metalc ? metalc13 B SG CYS 111 B CYS 111 1_555 G ZN ZN . B ZN 375 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.246 ? 
metalc ? metalc14 B SG CYS 174 B CYS 174 1_555 H ZN ZN . B ZN 376 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.149 ? 
#
_chem_comp.formula           'Zn 2' 
_chem_comp.formula_weight    65.409 
_chem_comp.id                ZN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ZINC ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     1HDX 
_atom_sites.fract_transf_matrix[1][1]    0.018322 
_atom_sites.fract_transf_matrix[1][2]    -0.007044 
_atom_sites.fract_transf_matrix[1][3]    0.004694 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.02384 
_atom_sites.fract_transf_matrix[2][3]    -0.001131 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010912 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 ZN A 1 375 375 ZN ZN . 
D 2 ZN A 1 376 376 ZN ZN . 
E 3 NAD A 1 377 377 NAD NAD . 
F 4 CXL A 1 378 378 CXL CXL . 
G 2 ZN B 1 375 375 ZN ZN . 
H 2 ZN B 1 376 376 ZN ZN . 
I 5 CL B 1 601 601 CL CL . 
J 3 NAD B 1 377 377 NAD NAD . 
K 4 CXL B 1 378 378 CXL CXL . 
L 6 HOH A 1 379 401 HOH HOH . 
L 6 HOH A 2 380 402 HOH HOH . 
L 6 HOH A 3 381 403 HOH HOH . 
L 6 HOH A 4 382 404 HOH HOH . 
L 6 HOH A 5 383 405 HOH HOH . 
L 6 HOH A 6 384 406 HOH HOH . 
L 6 HOH A 7 385 407 HOH HOH . 
L 6 HOH A 8 386 408 HOH HOH . 
L 6 HOH A 9 387 409 HOH HOH . 
L 6 HOH A 10 388 410 HOH HOH . 
L 6 HOH A 11 389 411 HOH HOH . 
L 6 HOH A 12 390 412 HOH HOH . 
L 6 HOH A 13 391 414 HOH HOH . 
L 6 HOH A 14 392 415 HOH HOH . 
L 6 HOH A 15 393 416 HOH HOH . 
L 6 HOH A 16 394 417 HOH HOH . 
L 6 HOH A 17 395 418 HOH HOH . 
L 6 HOH A 18 396 419 HOH HOH . 
L 6 HOH A 19 397 420 HOH HOH . 
L 6 HOH A 20 398 421 HOH HOH . 
L 6 HOH A 21 399 422 HOH HOH . 
L 6 HOH A 22 400 423 HOH HOH . 
L 6 HOH A 23 401 424 HOH HOH . 
L 6 HOH A 24 402 425 HOH HOH . 
L 6 HOH A 25 403 501 HOH HOH . 
L 6 HOH A 26 404 502 HOH HOH . 
L 6 HOH A 27 405 503 HOH HOH . 
L 6 HOH A 28 406 504 HOH HOH . 
L 6 HOH A 29 407 505 HOH HOH . 
L 6 HOH A 30 408 506 HOH HOH . 
L 6 HOH A 31 409 507 HOH HOH . 
L 6 HOH A 32 410 508 HOH HOH . 
L 6 HOH A 33 411 509 HOH HOH . 
L 6 HOH A 34 412 510 HOH HOH . 
L 6 HOH A 35 413 511 HOH HOH . 
L 6 HOH A 36 414 512 HOH HOH . 
L 6 HOH A 37 415 513 HOH HOH . 
L 6 HOH A 38 416 514 HOH HOH . 
L 6 HOH A 39 417 515 HOH HOH . 
L 6 HOH A 40 418 426 HOH HOH . 
L 6 HOH A 41 419 517 HOH HOH . 
L 6 HOH A 42 420 518 HOH HOH . 
L 6 HOH A 43 421 519 HOH HOH . 
L 6 HOH A 44 422 520 HOH HOH . 
L 6 HOH A 45 423 521 HOH HOH . 
L 6 HOH A 46 424 522 HOH HOH . 
L 6 HOH A 47 425 523 HOH HOH . 
L 6 HOH A 48 426 524 HOH HOH . 
L 6 HOH A 49 427 525 HOH HOH . 
L 6 HOH A 50 428 526 HOH HOH . 
L 6 HOH A 51 429 527 HOH HOH . 
L 6 HOH A 52 430 528 HOH HOH . 
L 6 HOH A 53 431 529 HOH HOH . 
L 6 HOH A 54 432 530 HOH HOH . 
L 6 HOH A 55 433 531 HOH HOH . 
L 6 HOH A 56 434 532 HOH HOH . 
L 6 HOH A 57 435 533 HOH HOH . 
L 6 HOH A 58 436 534 HOH HOH . 
L 6 HOH A 59 437 535 HOH HOH . 
L 6 HOH A 60 438 536 HOH HOH . 
L 6 HOH A 61 439 537 HOH HOH . 
L 6 HOH A 62 440 413 HOH HOH . 
L 6 HOH A 63 441 602 HOH HOH . 
M 6 HOH B 1 602 413 HOH HOH . 
M 6 HOH B 2 603 401 HOH HOH . 
M 6 HOH B 3 604 402 HOH HOH . 
M 6 HOH B 4 605 403 HOH HOH . 
M 6 HOH B 5 606 404 HOH HOH . 
M 6 HOH B 6 607 405 HOH HOH . 
M 6 HOH B 7 608 406 HOH HOH . 
M 6 HOH B 8 609 407 HOH HOH . 
M 6 HOH B 9 610 408 HOH HOH . 
M 6 HOH B 10 611 409 HOH HOH . 
M 6 HOH B 11 612 410 HOH HOH . 
M 6 HOH B 12 613 411 HOH HOH . 
M 6 HOH B 13 614 412 HOH HOH . 
M 6 HOH B 14 615 414 HOH HOH . 
M 6 HOH B 15 616 415 HOH HOH . 
M 6 HOH B 16 617 416 HOH HOH . 
M 6 HOH B 17 618 417 HOH HOH . 
M 6 HOH B 18 619 418 HOH HOH . 
M 6 HOH B 19 620 419 HOH HOH . 
M 6 HOH B 20 621 420 HOH HOH . 
M 6 HOH B 21 622 421 HOH HOH . 
M 6 HOH B 22 623 422 HOH HOH . 
M 6 HOH B 23 624 423 HOH HOH . 
M 6 HOH B 24 625 424 HOH HOH . 
M 6 HOH B 25 626 425 HOH HOH . 
M 6 HOH B 26 627 603 HOH HOH . 
M 6 HOH B 27 628 604 HOH HOH . 
M 6 HOH B 28 629 605 HOH HOH . 
M 6 HOH B 29 630 606 HOH HOH . 
M 6 HOH B 30 631 607 HOH HOH . 
M 6 HOH B 31 632 608 HOH HOH . 
M 6 HOH B 32 633 609 HOH HOH . 
M 6 HOH B 33 634 610 HOH HOH . 
M 6 HOH B 34 635 611 HOH HOH . 
M 6 HOH B 35 636 612 HOH HOH . 
M 6 HOH B 36 637 613 HOH HOH . 
M 6 HOH B 37 638 614 HOH HOH . 
M 6 HOH B 38 639 615 HOH HOH . 
M 6 HOH B 39 640 616 HOH HOH . 
M 6 HOH B 40 641 617 HOH HOH . 
M 6 HOH B 41 642 618 HOH HOH . 
M 6 HOH B 42 643 619 HOH HOH . 
M 6 HOH B 43 644 620 HOH HOH . 
M 6 HOH B 44 645 621 HOH HOH . 
M 6 HOH B 45 646 622 HOH HOH . 
M 6 HOH B 46 647 623 HOH HOH . 
M 6 HOH B 47 648 624 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           ZN 
_atom_site.label_atom_id         ZN 
_atom_site.label_comp_id         ZN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               0.11 
_atom_site.Cartn_y               10.432 
_atom_site.Cartn_z               -24.477 
_atom_site.occupancy             0.7 
_atom_site.B_iso_or_equiv        37.26 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          ZN 
_atom_site.auth_comp_id          ZN 
_atom_site.auth_seq_id           376 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           294 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           1 
#