data_1HEG # _model_server_result.job_id KuJYDm8ma3fXF3KkVPXeXw _model_server_result.datetime_utc '2024-11-26 05:56:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1heg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 1HEG # _exptl.entry_id 1HEG _exptl.method 'X-RAY DIFFRACTION' # _entity.details 'Synthetic peptide' _entity.formula_weight 577.713 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'methyl N-{(4S,5S)-5-[(L-alanyl-L-alanyl)amino]-4-hydroxy-6-phenylhexanoyl}-L-valyl-L-valinate' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1HEG _cell.length_a 64.14 _cell.length_b 64.14 _cell.length_c 84.24 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1HEG _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 9_555 -x,-x+y,-z+2/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 56.16 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C29 H47 N5 O7' _chem_comp.formula_weight 577.713 _chem_comp.id PSI _chem_comp.mon_nstd_flag . _chem_comp.name 'methyl N-{(4S,5S)-5-[(L-alanyl-L-alanyl)amino]-4-hydroxy-6-phenylhexanoyl}-L-valyl-L-valinate' _chem_comp.type peptide-like _chem_comp.pdbx_synonyms 'SKF 107457' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA PSI sing 277 n n N H PSI sing 278 n n N H2 PSI sing 279 n n CA C PSI sing 280 n n CA CB PSI sing 281 n n CA HA PSI sing 282 n n C O PSI doub 283 n n CB HB1 PSI sing 284 n n CB HB2 PSI sing 285 n n CB HB3 PSI sing 286 n n N1 CA1 PSI sing 287 n n N1 H1 PSI sing 288 n n CA1 C1 PSI sing 289 n n CA1 CB1 PSI sing 290 n n CA1 HA1 PSI sing 291 n n C1 O1 PSI doub 292 n n CB1 HB11 PSI sing 293 n n CB1 HB21 PSI sing 294 n n CB1 HB31 PSI sing 295 n n N2 CA2 PSI sing 296 n n N2 H3 PSI sing 297 n n CA2 C2 PSI sing 298 n n CA2 CB2 PSI sing 299 n n CA2 HA2 PSI sing 300 n n C2 OS PSI sing 301 n n C2 CM PSI sing 302 n n C2 HC PSI sing 303 n n OS HOS PSI sing 304 n n CB2 CG PSI sing 305 n n CB2 HB12 PSI sing 306 n n CB2 HB22 PSI sing 307 n n CG CD1 PSI doub 308 n y CG CD2 PSI sing 309 n y CD1 CE1 PSI sing 310 n y CD1 HD1 PSI sing 311 n n CD2 CE2 PSI doub 312 n y CD2 HD2 PSI sing 313 n n CE1 CZ PSI doub 314 n y CE1 HE1 PSI sing 315 n n CE2 CZ PSI sing 316 n y CE2 HE2 PSI sing 317 n n CZ HZ PSI sing 318 n n CM HM2 PSI sing 319 n n CM HM3 PSI sing 320 n n CA3 C3 PSI sing 321 n n CA3 HA3 PSI sing 322 n n C3 O2 PSI doub 323 n n N4 CA4 PSI sing 324 n n N4 H5 PSI sing 325 n n CA4 C4 PSI sing 326 n n CA4 CB3 PSI sing 327 n n CA4 HA4 PSI sing 328 n n C4 O3 PSI doub 329 n n CB3 CG1 PSI sing 330 n n CB3 CG2 PSI sing 331 n n CB3 HB PSI sing 332 n n CG1 HG11 PSI sing 333 n n CG1 HG12 PSI sing 334 n n CG1 HG13 PSI sing 335 n n CG2 HG21 PSI sing 336 n n CG2 HG22 PSI sing 337 n n CG2 HG23 PSI sing 338 n n N5 CA5 PSI sing 339 n n N5 H6 PSI sing 340 n n CA5 C5 PSI sing 341 n n CA5 CB4 PSI sing 342 n n CA5 HA5 PSI sing 343 n n C5 O4 PSI doub 344 n n CB4 CG11 PSI sing 345 n n CB4 CG21 PSI sing 346 n n CB4 HB4 PSI sing 347 n n CG11 HG14 PSI sing 348 n n CG11 HG15 PSI sing 349 n n CG11 HG16 PSI sing 350 n n CG21 HG24 PSI sing 351 n n CG21 HG25 PSI sing 352 n n C6 O5 PSI sing 353 n n C6 H22 PSI sing 354 n n C6 H31 PSI sing 355 n n C N1 PSI sing 356 n n C1 N2 PSI sing 357 n n CM CA3 PSI sing 358 n n C3 N4 PSI sing 359 n n C4 N5 PSI sing 360 n n C5 O5 PSI sing 361 n n CA3 HA31 PSI sing 362 n n HG26 CG21 PSI sing 363 n n H7 C6 PSI sing 364 n n # _atom_sites.entry_id 1HEG _atom_sites.fract_transf_matrix[1][1] 0.015591 _atom_sites.fract_transf_matrix[1][2] 0.009001 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018003 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011871 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PSI E 1 201 201 PSI ALA . C 3 HOH E 1 100 100 HOH HOH . C 3 HOH E 2 101 101 HOH HOH . C 3 HOH E 3 102 102 HOH HOH . C 3 HOH E 4 103 103 HOH HOH . C 3 HOH E 5 104 104 HOH HOH . C 3 HOH E 6 105 105 HOH HOH . C 3 HOH E 7 106 106 HOH HOH . C 3 HOH E 8 107 107 HOH HOH . C 3 HOH E 9 108 108 HOH HOH . C 3 HOH E 10 109 109 HOH HOH . C 3 HOH E 11 110 110 HOH HOH . C 3 HOH E 12 111 111 HOH HOH . C 3 HOH E 13 112 112 HOH HOH . C 3 HOH E 14 113 113 HOH HOH . C 3 HOH E 15 114 114 HOH HOH . C 3 HOH E 16 115 115 HOH HOH . C 3 HOH E 17 116 116 HOH HOH . C 3 HOH E 18 117 117 HOH HOH . C 3 HOH E 19 118 118 HOH HOH . C 3 HOH E 20 119 119 HOH HOH . C 3 HOH E 21 120 120 HOH HOH . C 3 HOH E 22 121 121 HOH HOH . C 3 HOH E 23 122 122 HOH HOH . C 3 HOH E 24 123 123 HOH HOH . C 3 HOH E 25 124 124 HOH HOH . C 3 HOH E 26 125 125 HOH HOH . C 3 HOH E 27 126 126 HOH HOH . C 3 HOH E 28 127 127 HOH HOH . C 3 HOH E 29 128 128 HOH HOH . C 3 HOH E 30 129 129 HOH HOH . C 3 HOH E 31 130 1 HOH HOH . C 3 HOH E 32 131 26 HOH HOH . C 3 HOH E 33 132 27 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N PSI . . . B 2 -13.823 14.474 35.207 0.5 17.17 ? N PSI 201 E 1 HETATM 2 C CA PSI . . . B 2 -12.564 14.209 34.566 0.5 19 ? CA PSI 201 E 1 HETATM 3 C C PSI . . . B 2 -12.322 15.096 33.343 0.5 18.82 ? C PSI 201 E 1 HETATM 4 O O PSI . . . B 2 -13.038 15.239 32.375 0.5 22.33 ? O PSI 201 E 1 HETATM 5 C CB PSI . . . B 2 -12.25 12.742 34.372 0.5 16.48 ? CB PSI 201 E 1 HETATM 6 N N1 PSI . . . B 2 -11.164 15.769 33.436 0.5 16.67 ? N1 PSI 201 E 1 HETATM 7 C CA1 PSI . . . B 2 -10.598 16.69 32.518 0.5 14.23 ? CA1 PSI 201 E 1 HETATM 8 C C1 PSI . . . B 2 -10.514 16.113 31.12 0.5 10 ? C1 PSI 201 E 1 HETATM 9 O O1 PSI . . . B 2 -9.853 15.141 30.78 0.5 6.78 ? O1 PSI 201 E 1 HETATM 10 C CB1 PSI . . . B 2 -9.262 17.187 33.108 0.5 15.14 ? CB1 PSI 201 E 1 HETATM 11 C C3 PSI . . . B 2 -8.183 17.817 26.36 0.5 10.6 ? C3 PSI 201 E 1 HETATM 12 O O2 PSI . . . B 2 -7.47 16.849 26.696 0.5 18.7 ? O2 PSI 201 E 1 HETATM 13 C CA3 PSI . . . B 2 -8.605 18.826 27.398 0.5 8.69 ? CA3 PSI 201 E 1 HETATM 14 C CM PSI . . . B 2 -9.405 18.196 28.546 0.5 6.25 ? CM PSI 201 E 1 HETATM 15 C C2 PSI . . . B 2 -10.818 17.753 28.01 0.5 8.61 ? C2 PSI 201 E 1 HETATM 16 O OS PSI . . . B 2 -11.697 18.822 28.249 0.5 4.53 ? OS PSI 201 E 1 HETATM 17 C CA2 PSI . . . B 2 -11.284 16.497 28.779 0.5 6.15 ? CA2 PSI 201 E 1 HETATM 18 N N2 PSI . . . B 2 -11.234 16.802 30.197 0.5 7.63 ? N2 PSI 201 E 1 HETATM 19 C CB2 PSI . . . B 2 -12.67 16.079 28.322 0.5 12.53 ? CB2 PSI 201 E 1 HETATM 20 C CG PSI . . . B 2 -13.432 14.971 29.048 0.5 11.04 ? CG PSI 201 E 1 HETATM 21 C CD1 PSI . . . B 2 -13.076 13.629 28.983 0.5 10.33 ? CD1 PSI 201 E 1 HETATM 22 C CD2 PSI . . . B 2 -14.56 15.373 29.807 0.5 12.71 ? CD2 PSI 201 E 1 HETATM 23 C CE1 PSI . . . B 2 -13.818 12.638 29.661 0.5 11.11 ? CE1 PSI 201 E 1 HETATM 24 C CE2 PSI . . . B 2 -15.3 14.38 30.483 0.5 14.32 ? CE2 PSI 201 E 1 HETATM 25 C CZ PSI . . . B 2 -14.917 13.043 30.412 0.5 10.61 ? CZ PSI 201 E 1 HETATM 26 N N4 PSI . . . B 2 -8.585 17.971 25.103 0.5 11.44 ? N4 PSI 201 E 1 HETATM 27 C CA4 PSI . . . B 2 -8.253 17.023 24.068 0.5 12.65 ? CA4 PSI 201 E 1 HETATM 28 C C4 PSI . . . B 2 -7.312 17.705 23.054 0.5 16.06 ? C4 PSI 201 E 1 HETATM 29 O O3 PSI . . . B 2 -7.544 18.799 22.596 0.5 12.36 ? O3 PSI 201 E 1 HETATM 30 C CB3 PSI . . . B 2 -9.457 16.377 23.387 0.5 12.94 ? CB3 PSI 201 E 1 HETATM 31 C CG1 PSI . . . B 2 -9.264 14.902 23.055 0.5 11.08 ? CG1 PSI 201 E 1 HETATM 32 C CG2 PSI . . . B 2 -10.739 16.533 24.224 0.5 13.21 ? CG2 PSI 201 E 1 HETATM 33 N N5 PSI . . . B 2 -6.277 16.91 22.755 0.5 16.75 ? N5 PSI 201 E 1 HETATM 34 C CA5 PSI . . . B 2 -5.196 17.143 21.863 0.5 16.61 ? CA5 PSI 201 E 1 HETATM 35 C C5 PSI . . . B 2 -4.253 18.199 22.473 0.5 19 ? C5 PSI 201 E 1 HETATM 36 O O4 PSI . . . B 2 -4.434 18.654 23.6 0.5 17.27 ? O4 PSI 201 E 1 HETATM 37 C CB4 PSI . . . B 2 -5.589 17.486 20.437 0.5 18.24 ? CB4 PSI 201 E 1 HETATM 38 C CG11 PSI . . . B 2 -7.059 17.853 20.2 0.5 19.12 ? CG11 PSI 201 E 1 HETATM 39 C CG21 PSI . . . B 2 -4.672 18.535 19.802 0.5 14.29 ? CG21 PSI 201 E 1 HETATM 40 C C6 PSI . . . B 2 -3.563 18.447 20.278 0.5 18.48 ? C6 PSI 201 E 1 HETATM 41 O O5 PSI . . . B 2 -3.172 18.6 21.652 0.5 18.59 ? O5 PSI 201 E 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 41 #