data_1HH4 # _model_server_result.job_id BcGrCfdyOEXMWRTW-04MgA _model_server_result.datetime_utc '2024-11-25 14:14:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1hh4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":1191}' # _entry.id 1HH4 # _exptl.entry_id 1HH4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1HH4 _cell.length_a 154.7 _cell.length_b 88.7 _cell.length_c 62.6 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1HH4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PQS dimeric 2 author_and_software_defined_assembly 1 PQS dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,F,I,K,M 1 1 B,D,G,H,J,L,N 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NZ LYS 16 A LYS 16 1_555 F MG MG . A MG 1191 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.972 ? metalc ? metalc2 A OG1 THR 17 A THR 17 1_555 F MG MG . A MG 1191 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.382 ? metalc ? metalc3 A O THR 35 A THR 35 1_555 F MG MG . A MG 1191 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.893 ? metalc ? metalc4 A OD2 ASP 57 A ASP 57 1_555 F MG MG . A MG 1191 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.737 ? metalc ? metalc5 A OD1 ASP 57 A ASP 57 1_555 F MG MG . A MG 1191 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.967 ? metalc ? metalc6 E O2B GDP . A GDP 1190 1_555 F MG MG . A MG 1191 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.793 ? metalc ? metalc7 F MG MG . A MG 1191 1_555 K O HOH . A HOH 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.585 ? metalc ? metalc8 B OG1 THR 17 B THR 17 1_555 H MG MG . B MG 1191 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.628 ? metalc ? metalc9 B OD1 ASP 57 B ASP 57 1_555 H MG MG . B MG 1191 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.779 ? metalc ? metalc10 B OD2 ASP 57 B ASP 57 1_555 H MG MG . B MG 1191 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.901 ? metalc ? metalc11 G O2B GDP . B GDP 1190 1_555 H MG MG . B MG 1191 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.767 ? metalc ? metalc12 H MG MG . B MG 1191 1_555 L O HOH . B HOH 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.482 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1HH4 _atom_sites.fract_transf_matrix[1][1] 0.006464 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011274 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015974 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 GDP A 1 1190 1190 GDP GDP . F 4 MG A 1 1191 1191 MG MG . G 3 GDP B 1 1190 1190 GDP GDP . H 4 MG B 1 1191 1191 MG MG . I 5 GER D 1 1502 1502 GER GER . J 5 GER E 1 1503 1503 GER GER . K 6 HOH A 1 2001 2001 HOH HOH . K 6 HOH A 2 2002 2002 HOH HOH . K 6 HOH A 3 2003 2003 HOH HOH . K 6 HOH A 4 2004 2004 HOH HOH . K 6 HOH A 5 2005 2005 HOH HOH . K 6 HOH A 6 2006 2006 HOH HOH . K 6 HOH A 7 2007 2007 HOH HOH . K 6 HOH A 8 2008 2008 HOH HOH . K 6 HOH A 9 2009 2009 HOH HOH . K 6 HOH A 10 2010 2010 HOH HOH . K 6 HOH A 11 2011 2011 HOH HOH . K 6 HOH A 12 2012 2012 HOH HOH . L 6 HOH B 1 2001 2001 HOH HOH . L 6 HOH B 2 2002 2002 HOH HOH . L 6 HOH B 3 2003 2003 HOH HOH . L 6 HOH B 4 2004 2004 HOH HOH . L 6 HOH B 5 2005 2005 HOH HOH . L 6 HOH B 6 2006 2006 HOH HOH . M 6 HOH D 1 2001 2001 HOH HOH . M 6 HOH D 2 2002 2002 HOH HOH . M 6 HOH D 3 2003 2003 HOH HOH . M 6 HOH D 4 2004 2004 HOH HOH . M 6 HOH D 5 2005 2005 HOH HOH . M 6 HOH D 6 2006 2006 HOH HOH . M 6 HOH D 7 2007 2007 HOH HOH . N 6 HOH E 1 2001 2001 HOH HOH . N 6 HOH E 2 2002 2002 HOH HOH . N 6 HOH E 3 2003 2003 HOH HOH . N 6 HOH E 4 2004 2004 HOH HOH . N 6 HOH E 5 2005 2005 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 4 _atom_site.Cartn_x 40.485 _atom_site.Cartn_y 21.084 _atom_site.Cartn_z 30.822 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 48.11 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 1191 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 317 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #