data_1HH4
#
_model_server_result.job_id            DCRiqmfQbKcJl1OuQeRpEg 
_model_server_result.datetime_utc      '2024-11-25 14:20:39' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1hh4 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":1502}' 
#
_entry.id    1HH4 
#
_exptl.entry_id    1HH4 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              274.484 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'GERAN-8-YL GERAN' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1HH4 
_cell.length_a            154.7 
_cell.length_b            88.7 
_cell.length_c            62.6 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1HH4 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PQS dimeric 2 author_and_software_defined_assembly 1 
PQS dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E,F,I,K,M 1 1 
B,D,G,H,J,L,N 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 I N N 
? 5 J N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NZ LYS 16 A LYS 16 1_555 F MG MG . A MG 1191 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.972 ? 
metalc ? metalc2 A OG1 THR 17 A THR 17 1_555 F MG MG . A MG 1191 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.382 ? 
metalc ? metalc3 A O THR 35 A THR 35 1_555 F MG MG . A MG 1191 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.893 ? 
metalc ? metalc4 A OD2 ASP 57 A ASP 57 1_555 F MG MG . A MG 1191 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.737 ? 
metalc ? metalc5 A OD1 ASP 57 A ASP 57 1_555 F MG MG . A MG 1191 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.967 ? 
metalc ? metalc6 E O2B GDP . A GDP 1190 1_555 F MG MG . A MG 1191 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.793 ? 
metalc ? metalc7 F MG MG . A MG 1191 1_555 K O HOH . A HOH 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.585 ? 
metalc ? metalc8 B OG1 THR 17 B THR 17 1_555 H MG MG . B MG 1191 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.628 ? 
metalc ? metalc9 B OD1 ASP 57 B ASP 57 1_555 H MG MG . B MG 1191 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.779 ? 
metalc ? metalc10 B OD2 ASP 57 B ASP 57 1_555 H MG MG . B MG 1191 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.901 ? 
metalc ? metalc11 G O2B GDP . B GDP 1190 1_555 H MG MG . B MG 1191 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.767 ? 
metalc ? metalc12 H MG MG . B MG 1191 1_555 L O HOH . B HOH 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.482 ? 
#
_chem_comp.formula           'C20 H34' 
_chem_comp.formula_weight    274.484 
_chem_comp.id                GER 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'GERAN-8-YL GERAN' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 GER sing 128 n n 
C1 H11 GER sing 129 n n 
C1 H12 GER sing 130 n n 
C1 H13 GER sing 131 n n 
C2 C3 GER doub 132 e n 
C2 H21 GER sing 133 n n 
C3 C4 GER sing 134 n n 
C3 C5 GER sing 135 n n 
C4 H41 GER sing 136 n n 
C4 H42 GER sing 137 n n 
C4 H43 GER sing 138 n n 
C5 C6 GER sing 139 n n 
C5 H51 GER sing 140 n n 
C5 H52 GER sing 141 n n 
C6 C7 GER sing 142 n n 
C6 H61 GER sing 143 n n 
C6 H62 GER sing 144 n n 
C7 C8 GER doub 145 e n 
C7 H71 GER sing 146 n n 
C8 C9 GER sing 147 n n 
C8 C10 GER sing 148 n n 
C9 H91 GER sing 149 n n 
C9 H92 GER sing 150 n n 
C9 H93 GER sing 151 n n 
C10 C11 GER sing 152 n n 
C10 H101 GER sing 153 n n 
C10 H102 GER sing 154 n n 
C11 C12 GER sing 155 n n 
C11 H111 GER sing 156 n n 
C11 H112 GER sing 157 n n 
C12 C13 GER doub 158 e n 
C12 H121 GER sing 159 n n 
C13 C14 GER sing 160 n n 
C13 C15 GER sing 161 n n 
C14 H141 GER sing 162 n n 
C14 H142 GER sing 163 n n 
C14 H143 GER sing 164 n n 
C15 C16 GER sing 165 n n 
C15 H151 GER sing 166 n n 
C15 H152 GER sing 167 n n 
C16 C17 GER sing 168 n n 
C16 H161 GER sing 169 n n 
C16 H162 GER sing 170 n n 
C17 C18 GER doub 171 n n 
C17 H171 GER sing 172 n n 
C18 C19 GER sing 173 n n 
C18 C20 GER sing 174 n n 
C19 H191 GER sing 175 n n 
C19 H192 GER sing 176 n n 
C19 H193 GER sing 177 n n 
C20 H201 GER sing 178 n n 
C20 H202 GER sing 179 n n 
C20 H203 GER sing 180 n n 
#
_atom_sites.entry_id                     1HH4 
_atom_sites.fract_transf_matrix[1][1]    0.006464 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011274 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.015974 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 GDP A 1 1190 1190 GDP GDP . 
F 4 MG A 1 1191 1191 MG MG . 
G 3 GDP B 1 1190 1190 GDP GDP . 
H 4 MG B 1 1191 1191 MG MG . 
I 5 GER D 1 1502 1502 GER GER . 
J 5 GER E 1 1503 1503 GER GER . 
K 6 HOH A 1 2001 2001 HOH HOH . 
K 6 HOH A 2 2002 2002 HOH HOH . 
K 6 HOH A 3 2003 2003 HOH HOH . 
K 6 HOH A 4 2004 2004 HOH HOH . 
K 6 HOH A 5 2005 2005 HOH HOH . 
K 6 HOH A 6 2006 2006 HOH HOH . 
K 6 HOH A 7 2007 2007 HOH HOH . 
K 6 HOH A 8 2008 2008 HOH HOH . 
K 6 HOH A 9 2009 2009 HOH HOH . 
K 6 HOH A 10 2010 2010 HOH HOH . 
K 6 HOH A 11 2011 2011 HOH HOH . 
K 6 HOH A 12 2012 2012 HOH HOH . 
L 6 HOH B 1 2001 2001 HOH HOH . 
L 6 HOH B 2 2002 2002 HOH HOH . 
L 6 HOH B 3 2003 2003 HOH HOH . 
L 6 HOH B 4 2004 2004 HOH HOH . 
L 6 HOH B 5 2005 2005 HOH HOH . 
L 6 HOH B 6 2006 2006 HOH HOH . 
M 6 HOH D 1 2001 2001 HOH HOH . 
M 6 HOH D 2 2002 2002 HOH HOH . 
M 6 HOH D 3 2003 2003 HOH HOH . 
M 6 HOH D 4 2004 2004 HOH HOH . 
M 6 HOH D 5 2005 2005 HOH HOH . 
M 6 HOH D 6 2006 2006 HOH HOH . 
M 6 HOH D 7 2007 2007 HOH HOH . 
N 6 HOH E 1 2001 2001 HOH HOH . 
N 6 HOH E 2 2002 2002 HOH HOH . 
N 6 HOH E 3 2003 2003 HOH HOH . 
N 6 HOH E 4 2004 2004 HOH HOH . 
N 6 HOH E 5 2005 2005 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GER . . . I 5 71.2 36.872 58.195 1 78.1 ? C1 GER 1502 D 1 
HETATM 2 C C2 GER . . . I 5 72.148 35.91 57.479 1 78.1 ? C2 GER 1502 D 1 
HETATM 3 C C3 GER . . . I 5 73.499 35.825 57.7 1 78.1 ? C3 GER 1502 D 1 
HETATM 4 C C4 GER . . . I 5 74.124 36.761 58.746 1 78.1 ? C4 GER 1502 D 1 
HETATM 5 C C5 GER . . . I 5 74.34 34.801 56.894 1 78.1 ? C5 GER 1502 D 1 
HETATM 6 C C6 GER . . . I 5 74.734 33.411 57.394 1 78.1 ? C6 GER 1502 D 1 
HETATM 7 C C7 GER . . . I 5 75.081 32.443 56.253 1 78.1 ? C7 GER 1502 D 1 
HETATM 8 C C8 GER . . . I 5 74.185 31.509 55.779 1 78.1 ? C8 GER 1502 D 1 
HETATM 9 C C9 GER . . . I 5 72.796 31.461 56.434 1 78.1 ? C9 GER 1502 D 1 
HETATM 10 C C10 GER . . . I 5 74.714 30.608 54.612 1 78.1 ? C10 GER 1502 D 1 
HETATM 11 C C11 GER . . . I 5 73.843 29.554 53.918 1 78.1 ? C11 GER 1502 D 1 
HETATM 12 C C12 GER . . . I 5 74.601 28.279 53.554 1 78.1 ? C12 GER 1502 D 1 
HETATM 13 C C13 GER . . . I 5 74.021 27.199 52.933 1 78.1 ? C13 GER 1502 D 1 
HETATM 14 C C14 GER . . . I 5 72.525 27.263 52.583 1 78.1 ? C14 GER 1502 D 1 
HETATM 15 C C15 GER . . . I 5 74.858 25.96 52.601 1 78.1 ? C15 GER 1502 D 1 
HETATM 16 C C16 GER . . . I 5 74.304 24.755 51.831 1 78.1 ? C16 GER 1502 D 1 
HETATM 17 C C17 GER . . . I 5 75.156 23.51 52.044 1 78.1 ? C17 GER 1502 D 1 
HETATM 18 C C18 GER . . . I 5 74.63 22.249 51.98 1 78.1 ? C18 GER 1502 D 1 
HETATM 19 C C19 GER . . . I 5 73.123 22.105 51.68 1 78.1 ? C19 GER 1502 D 1 
HETATM 20 C C20 GER . . . I 5 75.671 21.13 52.227 1 78.1 ? C20 GER 1502 D 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    15 
_model_server_stats.query_time_ms           322 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           20 
#