data_1HJ1 # _model_server_result.job_id WAxMnaEWrw0Oz2EKorwxIQ _model_server_result.datetime_utc '2024-11-06 23:42:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1hj1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1436}' # _entry.id 1HJ1 # _exptl.entry_id 1HJ1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 525.805 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-BUTYL-11-[(7R,8R,9S,13S,14S,17S)-3,17-DIHYDROXY-13-METHYL-7,8,9,11,12,13,14,15,16,17-DECAHYDRO-6H-CYCLOPENTA[A]PHENANTHREN-7-YL]-N-METHYLUNDECANAMIDE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1HJ1 _cell.length_a 60.38 _cell.length_b 82.67 _cell.length_c 106.34 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1HJ1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 24 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 21 21 21' # _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_555 x,-y,-z+1/2 1 0 0 0 -1 0 0 0 -1 0 0 53.17 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE2 GLU 20 A GLU 229 7_556 D NI NI . A NI 1438 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.667 ? metalc ? metalc2 A NE2 HIS 54 A HIS 263 1_555 D NI NI . A NI 1438 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.127 ? metalc ? metalc3 A O SER 79 A SER 288 1_555 C HG PMB . A PMB 1437 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.989 ? metalc ? metalc4 A SG CYS 80 A CYS 289 1_555 C HG PMB . A PMB 1437 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? metalc ? metalc5 A NE2 HIS 96 A HIS 305 7_556 E NI NI . A NI 1439 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.654 ? metalc ? metalc6 A NE2 HIS 96 A HIS 305 1_555 E NI NI . A NI 1439 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.134 ? metalc ? metalc7 A NH2 ARG 212 A ARG 421 1_555 C HG PMB . A PMB 1437 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.07 ? # _chem_comp.formula 'C34 H55 N O3' _chem_comp.formula_weight 525.805 _chem_comp.id AOE _chem_comp.mon_nstd_flag . _chem_comp.name N-BUTYL-11-[(7R,8R,9S,13S,14S,17S)-3,17-DIHYDROXY-13-METHYL-7,8,9,11,12,13,14,15,16,17-DECAHYDRO-6H-CYCLOPENTA[A]PHENANTHREN-7-YL]-N-METHYLUNDECANAMIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 AOE doub 13 n y C1 C10 AOE sing 14 n y C1 HC1 AOE sing 15 n n C2 C3 AOE sing 16 n y C2 HC2 AOE sing 17 n n C3 O3 AOE sing 18 n n C3 C4 AOE doub 19 n y O3 HO3 AOE sing 20 n n C4 C5 AOE sing 21 n y C4 HC4 AOE sing 22 n n C5 C6 AOE sing 23 n n C5 C10 AOE doub 24 n y C6 C7 AOE sing 25 n n C6 HC61 AOE sing 26 n n C6 HC62 AOE sing 27 n n C7 C8 AOE sing 28 n n C7 C19 AOE sing 29 n n C7 HC7 AOE sing 30 n n C8 C9 AOE sing 31 n n C8 C14 AOE sing 32 n n C8 HC8 AOE sing 33 n n C9 C10 AOE sing 34 n n C9 C11 AOE sing 35 n n C9 HC9 AOE sing 36 n n C11 C12 AOE sing 37 n n C11 H111 AOE sing 38 n n C11 H112 AOE sing 39 n n C12 C13 AOE sing 40 n n C12 H121 AOE sing 41 n n C12 H122 AOE sing 42 n n C13 C14 AOE sing 43 n n C13 C17 AOE sing 44 n n C13 C18 AOE sing 45 n n C14 C15 AOE sing 46 n n C14 HC41 AOE sing 47 n n C15 C16 AOE sing 48 n n C15 H151 AOE sing 49 n n C15 H152 AOE sing 50 n n C16 C17 AOE sing 51 n n C16 H161 AOE sing 52 n n C16 H162 AOE sing 53 n n C17 O17 AOE sing 54 n n C17 HC71 AOE sing 55 n n C18 H181 AOE sing 56 n n C18 H182 AOE sing 57 n n C18 H183 AOE sing 58 n n O17 HO71 AOE sing 59 n n C19 C20 AOE sing 60 n n C19 H191 AOE sing 61 n n C19 H192 AOE sing 62 n n C20 C21 AOE sing 63 n n C20 H201 AOE sing 64 n n C20 H202 AOE sing 65 n n C21 C22 AOE sing 66 n n C21 H211 AOE sing 67 n n C21 H212 AOE sing 68 n n C22 C23 AOE sing 69 n n C22 H221 AOE sing 70 n n C22 H222 AOE sing 71 n n C23 C24 AOE sing 72 n n C23 H231 AOE sing 73 n n C23 H232 AOE sing 74 n n C24 C25 AOE sing 75 n n C24 H241 AOE sing 76 n n C24 H242 AOE sing 77 n n C25 C26 AOE sing 78 n n C25 H251 AOE sing 79 n n C25 H252 AOE sing 80 n n C26 C27 AOE sing 81 n n C26 H261 AOE sing 82 n n C26 H262 AOE sing 83 n n C27 C28 AOE sing 84 n n C27 H271 AOE sing 85 n n C27 H272 AOE sing 86 n n C28 C29 AOE sing 87 n n C28 H281 AOE sing 88 n n C28 H282 AOE sing 89 n n C29 O29 AOE doub 90 n n C29 N29 AOE sing 91 n n N29 C30 AOE sing 92 n n N29 C31 AOE sing 93 n n C30 H301 AOE sing 94 n n C30 H302 AOE sing 95 n n C30 H303 AOE sing 96 n n C31 C32 AOE sing 97 n n C31 H311 AOE sing 98 n n C31 H312 AOE sing 99 n n C32 C33 AOE sing 100 n n C32 H321 AOE sing 101 n n C32 H322 AOE sing 102 n n C33 C34 AOE sing 103 n n C33 H331 AOE sing 104 n n C33 H332 AOE sing 105 n n C34 H341 AOE sing 106 n n C34 H342 AOE sing 107 n n C34 H343 AOE sing 108 n n # _atom_sites.entry_id 1HJ1 _atom_sites.fract_transf_matrix[1][1] 0.016562 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012096 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009404 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 AOE A 1 1436 1436 AOE AOE . C 3 PMB A 1 1437 1437 PMB PMB . D 4 NI A 1 1438 1438 NI NI . E 4 NI A 1 1439 1439 NI NI . F 5 HOH A 1 2001 2001 HOH HOH . F 5 HOH A 2 2002 2002 HOH HOH . F 5 HOH A 3 2003 2003 HOH HOH . F 5 HOH A 4 2004 2004 HOH HOH . F 5 HOH A 5 2005 2005 HOH HOH . F 5 HOH A 6 2006 2006 HOH HOH . F 5 HOH A 7 2007 2007 HOH HOH . F 5 HOH A 8 2008 2008 HOH HOH . F 5 HOH A 9 2009 2009 HOH HOH . F 5 HOH A 10 2010 2010 HOH HOH . F 5 HOH A 11 2011 2011 HOH HOH . F 5 HOH A 12 2012 2012 HOH HOH . F 5 HOH A 13 2013 2013 HOH HOH . F 5 HOH A 14 2014 2014 HOH HOH . F 5 HOH A 15 2015 2015 HOH HOH . F 5 HOH A 16 2016 2016 HOH HOH . F 5 HOH A 17 2017 2017 HOH HOH . F 5 HOH A 18 2018 2018 HOH HOH . F 5 HOH A 19 2019 2019 HOH HOH . F 5 HOH A 20 2020 2020 HOH HOH . F 5 HOH A 21 2021 2021 HOH HOH . F 5 HOH A 22 2022 2022 HOH HOH . F 5 HOH A 23 2023 2023 HOH HOH . F 5 HOH A 24 2024 2024 HOH HOH . F 5 HOH A 25 2025 2025 HOH HOH . F 5 HOH A 26 2026 2026 HOH HOH . F 5 HOH A 27 2027 2027 HOH HOH . F 5 HOH A 28 2028 2028 HOH HOH . F 5 HOH A 29 2029 2029 HOH HOH . F 5 HOH A 30 2030 2030 HOH HOH . F 5 HOH A 31 2031 2031 HOH HOH . F 5 HOH A 32 2032 2032 HOH HOH . F 5 HOH A 33 2033 2033 HOH HOH . F 5 HOH A 34 2034 2034 HOH HOH . F 5 HOH A 35 2035 2035 HOH HOH . F 5 HOH A 36 2036 2036 HOH HOH . F 5 HOH A 37 2037 2037 HOH HOH . F 5 HOH A 38 2038 2038 HOH HOH . F 5 HOH A 39 2039 2039 HOH HOH . F 5 HOH A 40 2040 2040 HOH HOH . F 5 HOH A 41 2041 2041 HOH HOH . F 5 HOH A 42 2042 2042 HOH HOH . F 5 HOH A 43 2043 2043 HOH HOH . F 5 HOH A 44 2044 2044 HOH HOH . F 5 HOH A 45 2045 2045 HOH HOH . F 5 HOH A 46 2046 2046 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 AOE . . . B 2 2.29 -0.107 43.331 1 44.82 ? C1 AOE 1436 A 1 HETATM 2 C C2 AOE . . . B 2 3.329 0.475 44.056 1 43.64 ? C2 AOE 1436 A 1 HETATM 3 C C3 AOE . . . B 2 3.079 1.14 45.237 1 43.67 ? C3 AOE 1436 A 1 HETATM 4 O O3 AOE . . . B 2 4.069 1.766 45.986 1 44.02 ? O3 AOE 1436 A 1 HETATM 5 C C4 AOE . . . B 2 1.785 1.196 45.675 1 44.28 ? C4 AOE 1436 A 1 HETATM 6 C C5 AOE . . . B 2 0.72 0.605 44.987 1 45.45 ? C5 AOE 1436 A 1 HETATM 7 C C6 AOE . . . B 2 -0.665 0.733 45.608 1 44.73 ? C6 AOE 1436 A 1 HETATM 8 C C7 AOE . . . B 2 -1.76 0.351 44.599 1 47.1 ? C7 AOE 1436 A 1 HETATM 9 C C8 AOE . . . B 2 -1.393 -0.928 43.809 1 44.76 ? C8 AOE 1436 A 1 HETATM 10 C C9 AOE . . . B 2 -0.16 -0.603 42.934 1 42.89 ? C9 AOE 1436 A 1 HETATM 11 C C10 AOE . . . B 2 0.96 -0.063 43.778 1 42.86 ? C10 AOE 1436 A 1 HETATM 12 C C11 AOE . . . B 2 0.246 -1.87 42.135 1 43.69 ? C11 AOE 1436 A 1 HETATM 13 C C12 AOE . . . B 2 -0.875 -2.386 41.198 1 43.57 ? C12 AOE 1436 A 1 HETATM 14 C C13 AOE . . . B 2 -2.151 -2.561 42.042 1 43.84 ? C13 AOE 1436 A 1 HETATM 15 C C14 AOE . . . B 2 -2.514 -1.251 42.785 1 44.08 ? C14 AOE 1436 A 1 HETATM 16 C C15 AOE . . . B 2 -3.858 -1.688 43.438 1 45.36 ? C15 AOE 1436 A 1 HETATM 17 C C16 AOE . . . B 2 -4.537 -2.509 42.322 1 44.19 ? C16 AOE 1436 A 1 HETATM 18 C C17 AOE . . . B 2 -3.459 -2.728 41.237 1 42.78 ? C17 AOE 1436 A 1 HETATM 19 C C18 AOE . . . B 2 -1.884 -3.682 43.043 1 38.94 ? C18 AOE 1436 A 1 HETATM 20 O O17 AOE . . . B 2 -3.506 -4.046 40.78 1 39.4 ? O17 AOE 1436 A 1 HETATM 21 C C19 AOE . . . B 2 -1.882 1.512 43.57 1 48.05 ? C19 AOE 1436 A 1 HETATM 22 C C20 AOE . . . B 2 -2.793 2.563 44.231 1 51.04 ? C20 AOE 1436 A 1 HETATM 23 C C21 AOE . . . B 2 -3.073 3.656 43.214 1 53.06 ? C21 AOE 1436 A 1 HETATM 24 C C22 AOE . . . B 2 -3.879 4.74 43.914 1 56.06 ? C22 AOE 1436 A 1 HETATM 25 C C23 AOE . . . B 2 -5.188 4.959 43.138 1 58.53 ? C23 AOE 1436 A 1 HETATM 26 C C24 AOE . . . B 2 -5.304 6.487 43.029 1 61.08 ? C24 AOE 1436 A 1 HETATM 27 C C25 AOE . . . B 2 -4.622 7.003 41.76 1 63.08 ? C25 AOE 1436 A 1 HETATM 28 C C26 AOE . . . B 2 -4.065 8.416 42.045 1 64.72 ? C26 AOE 1436 A 1 HETATM 29 C C27 AOE . . . B 2 -3.977 9.195 40.732 1 63.9 ? C27 AOE 1436 A 1 HETATM 30 C C28 AOE . . . B 2 -2.677 10.036 40.733 1 64.89 ? C28 AOE 1436 A 1 HETATM 31 C C29 AOE . . . B 2 -2.885 11.007 39.546 1 65.68 ? C29 AOE 1436 A 1 HETATM 32 O O29 AOE . . . B 2 -3.856 10.733 38.844 1 67.1 ? O29 AOE 1436 A 1 HETATM 33 N N29 AOE . . . B 2 -2.017 12.029 39.398 1 63.65 ? N29 AOE 1436 A 1 HETATM 34 C C30 AOE . . . B 2 -2.237 12.929 38.279 1 62.9 ? C30 AOE 1436 A 1 HETATM 35 C C31 AOE . . . B 2 -0.901 12.215 40.327 1 63.16 ? C31 AOE 1436 A 1 HETATM 36 C C32 AOE . . . B 2 0.417 12.1 39.576 1 62.36 ? C32 AOE 1436 A 1 HETATM 37 C C33 AOE . . . B 2 1.514 12.832 40.345 1 64.26 ? C33 AOE 1436 A 1 HETATM 38 C C34 AOE . . . B 2 2.197 11.974 41.424 1 63.8 ? C34 AOE 1436 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 244 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 38 #