data_1HJ1 # _model_server_result.job_id lWrqMT-qo0mq46UFgAriCw _model_server_result.datetime_utc '2024-11-06 23:36:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1hj1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1437}' # _entry.id 1HJ1 # _exptl.entry_id 1HJ1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 357.757 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PARA-MERCURY-BENZENESULFONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1HJ1 _cell.length_a 60.38 _cell.length_b 82.67 _cell.length_c 106.34 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1HJ1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 24 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 21 21 21' # _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_555 x,-y,-z+1/2 1 0 0 0 -1 0 0 0 -1 0 0 53.17 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE2 GLU 20 A GLU 229 7_556 D NI NI . A NI 1438 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.667 ? metalc ? metalc2 A NE2 HIS 54 A HIS 263 1_555 D NI NI . A NI 1438 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.127 ? metalc ? metalc3 A O SER 79 A SER 288 1_555 C HG PMB . A PMB 1437 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.989 ? metalc ? metalc4 A SG CYS 80 A CYS 289 1_555 C HG PMB . A PMB 1437 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? metalc ? metalc5 A NE2 HIS 96 A HIS 305 7_556 E NI NI . A NI 1439 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.654 ? metalc ? metalc6 A NE2 HIS 96 A HIS 305 1_555 E NI NI . A NI 1439 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.134 ? metalc ? metalc7 A NH2 ARG 212 A ARG 421 1_555 C HG PMB . A PMB 1437 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.07 ? # _chem_comp.formula 'C6 H5 Hg O3 S' _chem_comp.formula_weight 357.757 _chem_comp.id PMB _chem_comp.mon_nstd_flag . _chem_comp.name 'PARA-MERCURY-BENZENESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 PMB doub 356 n y C1 C6 PMB sing 357 n y C1 S1 PMB sing 358 n n C2 C3 PMB sing 359 n y C2 H2 PMB sing 360 n n C3 C4 PMB doub 361 n y C3 H3 PMB sing 362 n n C4 C5 PMB sing 363 n y C4 HG PMB sing 364 n n C5 C6 PMB doub 365 n y C5 H5 PMB sing 366 n n C6 H6 PMB sing 367 n n S1 O1 PMB doub 368 n n S1 O2 PMB doub 369 n n S1 O3 PMB sing 370 n n O3 HO3 PMB sing 371 n n # _atom_sites.entry_id 1HJ1 _atom_sites.fract_transf_matrix[1][1] 0.016562 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012096 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009404 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 AOE A 1 1436 1436 AOE AOE . C 3 PMB A 1 1437 1437 PMB PMB . D 4 NI A 1 1438 1438 NI NI . E 4 NI A 1 1439 1439 NI NI . F 5 HOH A 1 2001 2001 HOH HOH . F 5 HOH A 2 2002 2002 HOH HOH . F 5 HOH A 3 2003 2003 HOH HOH . F 5 HOH A 4 2004 2004 HOH HOH . F 5 HOH A 5 2005 2005 HOH HOH . F 5 HOH A 6 2006 2006 HOH HOH . F 5 HOH A 7 2007 2007 HOH HOH . F 5 HOH A 8 2008 2008 HOH HOH . F 5 HOH A 9 2009 2009 HOH HOH . F 5 HOH A 10 2010 2010 HOH HOH . F 5 HOH A 11 2011 2011 HOH HOH . F 5 HOH A 12 2012 2012 HOH HOH . F 5 HOH A 13 2013 2013 HOH HOH . F 5 HOH A 14 2014 2014 HOH HOH . F 5 HOH A 15 2015 2015 HOH HOH . F 5 HOH A 16 2016 2016 HOH HOH . F 5 HOH A 17 2017 2017 HOH HOH . F 5 HOH A 18 2018 2018 HOH HOH . F 5 HOH A 19 2019 2019 HOH HOH . F 5 HOH A 20 2020 2020 HOH HOH . F 5 HOH A 21 2021 2021 HOH HOH . F 5 HOH A 22 2022 2022 HOH HOH . F 5 HOH A 23 2023 2023 HOH HOH . F 5 HOH A 24 2024 2024 HOH HOH . F 5 HOH A 25 2025 2025 HOH HOH . F 5 HOH A 26 2026 2026 HOH HOH . F 5 HOH A 27 2027 2027 HOH HOH . F 5 HOH A 28 2028 2028 HOH HOH . F 5 HOH A 29 2029 2029 HOH HOH . F 5 HOH A 30 2030 2030 HOH HOH . F 5 HOH A 31 2031 2031 HOH HOH . F 5 HOH A 32 2032 2032 HOH HOH . F 5 HOH A 33 2033 2033 HOH HOH . F 5 HOH A 34 2034 2034 HOH HOH . F 5 HOH A 35 2035 2035 HOH HOH . F 5 HOH A 36 2036 2036 HOH HOH . F 5 HOH A 37 2037 2037 HOH HOH . F 5 HOH A 38 2038 2038 HOH HOH . F 5 HOH A 39 2039 2039 HOH HOH . F 5 HOH A 40 2040 2040 HOH HOH . F 5 HOH A 41 2041 2041 HOH HOH . F 5 HOH A 42 2042 2042 HOH HOH . F 5 HOH A 43 2043 2043 HOH HOH . F 5 HOH A 44 2044 2044 HOH HOH . F 5 HOH A 45 2045 2045 HOH HOH . F 5 HOH A 46 2046 2046 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PMB . . . C 3 2.393 3.907 27.807 1 61.69 ? C1 PMB 1437 A 1 HETATM 2 C C2 PMB . . . C 3 3.312 4.857 27.41 1 61.26 ? C2 PMB 1437 A 1 HETATM 3 C C3 PMB . . . C 3 4.016 5.635 28.326 1 59.18 ? C3 PMB 1437 A 1 HETATM 4 C C4 PMB . . . C 3 3.769 5.398 29.678 1 58.95 ? C4 PMB 1437 A 1 HETATM 5 C C5 PMB . . . C 3 2.862 4.453 30.103 1 58.63 ? C5 PMB 1437 A 1 HETATM 6 C C6 PMB . . . C 3 2.171 3.704 29.148 1 60.78 ? C6 PMB 1437 A 1 HETATM 7 S S1 PMB . . . C 3 1.601 3.019 26.521 1 62.54 ? S1 PMB 1437 A 1 HETATM 8 O O1 PMB . . . C 3 0.84 1.816 27.092 1 61.19 ? O1 PMB 1437 A 1 HETATM 9 O O2 PMB . . . C 3 2.797 2.484 25.858 1 62.51 ? O2 PMB 1437 A 1 HETATM 10 O O3 PMB . . . C 3 0.684 3.875 25.91 1 62.46 ? O3 PMB 1437 A 1 HETATM 11 HG HG PMB . . . C 3 4.824 6.528 31.02 1 56.38 ? HG PMB 1437 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 11 #