data_1HJT
#
_model_server_result.job_id            oQKu9dUof3Chwv1ZDU2cYw 
_model_server_result.datetime_utc      '2024-11-26 16:19:34' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1hjt 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":160}' 
#
_entry.id    1HJT 
#
_exptl.entry_id    1HJT 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              616.487 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PROTOPORPHYRIN IX CONTAINING FE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          106.32 
_cell.angle_gamma         90 
_cell.entry_id            1HJT 
_cell.length_a            64.453 
_cell.length_b            29.444 
_cell.length_c            35.328 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1HJT 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 93 A HIS 93 1_555 C FE HEM . A HEM 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.179 ? 
metalc ? metalc2 C FE HEM . A HEM 160 1_555 D N NO . A NO 170 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.889 ? 
metalc ? metalc3 C FE HEM . A HEM 160 1_555 D O NO . A NO 170 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.551 ? 
#
_chem_comp.formula           'C34 H32 Fe N4 O4' 
_chem_comp.formula_weight    616.487 
_chem_comp.id                HEM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PROTOPORPHYRIN IX CONTAINING FE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     HEME 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CHA C1A HEM sing 116 n n 
CHA C4D HEM doub 117 n n 
CHA HHA HEM sing 118 n n 
CHB C4A HEM sing 119 n n 
CHB C1B HEM doub 120 n n 
CHB HHB HEM sing 121 n n 
CHC C4B HEM sing 122 n n 
CHC C1C HEM doub 123 n n 
CHC HHC HEM sing 124 n n 
CHD C4C HEM doub 125 n n 
CHD C1D HEM sing 126 n n 
CHD HHD HEM sing 127 n n 
C1A C2A HEM doub 128 n y 
C1A NA HEM sing 129 n y 
C2A C3A HEM sing 130 n y 
C2A CAA HEM sing 131 n n 
C3A C4A HEM doub 132 n y 
C3A CMA HEM sing 133 n n 
C4A NA HEM sing 134 n y 
CMA HMA HEM sing 135 n n 
CMA HMAA HEM sing 136 n n 
CMA HMAB HEM sing 137 n n 
CAA CBA HEM sing 138 n n 
CAA HAA HEM sing 139 n n 
CAA HAAA HEM sing 140 n n 
CBA CGA HEM sing 141 n n 
CBA HBA HEM sing 142 n n 
CBA HBAA HEM sing 143 n n 
CGA O1A HEM doub 144 n n 
CGA O2A HEM sing 145 n n 
C1B C2B HEM sing 146 n n 
C1B NB HEM sing 147 n n 
C2B C3B HEM doub 148 n n 
C2B CMB HEM sing 149 n n 
C3B C4B HEM sing 150 n n 
C3B CAB HEM sing 151 n n 
C4B NB HEM doub 152 n n 
CMB HMB HEM sing 153 n n 
CMB HMBA HEM sing 154 n n 
CMB HMBB HEM sing 155 n n 
CAB CBB HEM doub 156 n n 
CAB HAB HEM sing 157 n n 
CBB HBB HEM sing 158 n n 
CBB HBBA HEM sing 159 n n 
C1C C2C HEM sing 160 n y 
C1C NC HEM sing 161 n y 
C2C C3C HEM doub 162 n y 
C2C CMC HEM sing 163 n n 
C3C C4C HEM sing 164 n y 
C3C CAC HEM sing 165 n n 
C4C NC HEM sing 166 n y 
CMC HMC HEM sing 167 n n 
CMC HMCA HEM sing 168 n n 
CMC HMCB HEM sing 169 n n 
CAC CBC HEM doub 170 n n 
CAC HAC HEM sing 171 n n 
CBC HBC HEM sing 172 n n 
CBC HBCA HEM sing 173 n n 
C1D C2D HEM sing 174 n n 
C1D ND HEM doub 175 n n 
C2D C3D HEM doub 176 n n 
C2D CMD HEM sing 177 n n 
C3D C4D HEM sing 178 n n 
C3D CAD HEM sing 179 n n 
C4D ND HEM sing 180 n n 
CMD HMD HEM sing 181 n n 
CMD HMDA HEM sing 182 n n 
CMD HMDB HEM sing 183 n n 
CAD CBD HEM sing 184 n n 
CAD HAD HEM sing 185 n n 
CAD HADA HEM sing 186 n n 
CBD CGD HEM sing 187 n n 
CBD HBD HEM sing 188 n n 
CBD HBDA HEM sing 189 n n 
CGD O1D HEM doub 190 n n 
CGD O2D HEM sing 191 n n 
O2A H2A HEM sing 192 n n 
O2D H2D HEM sing 193 n n 
FE NA HEM sing 194 n n 
FE NB HEM sing 195 n n 
FE NC HEM sing 196 n n 
FE ND HEM sing 197 n n 
#
_atom_sites.entry_id                     1HJT 
_atom_sites.fract_transf_matrix[1][1]    0.015515 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.004543 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.033963 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.029495 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 SO4 A 1 200 200 SO4 SO4 . 
C 3 HEM A 1 160 160 HEM HEM . 
D 4 NO A 1 170 170 NO NMO . 
E 5 HOH A 1 1001 1001 HOH HOH . 
E 5 HOH A 2 1002 1002 HOH HOH . 
E 5 HOH A 3 1003 1003 HOH HOH . 
E 5 HOH A 4 1004 1004 HOH HOH . 
E 5 HOH A 5 1005 1005 HOH HOH . 
E 5 HOH A 6 1006 1006 HOH HOH . 
E 5 HOH A 7 1007 1007 HOH HOH . 
E 5 HOH A 8 1008 1008 HOH HOH . 
E 5 HOH A 9 1009 1009 HOH HOH . 
E 5 HOH A 10 1010 1010 HOH HOH . 
E 5 HOH A 11 1011 1011 HOH HOH . 
E 5 HOH A 12 1012 1012 HOH HOH . 
E 5 HOH A 13 1013 1013 HOH HOH . 
E 5 HOH A 14 1014 1014 HOH HOH . 
E 5 HOH A 15 1015 1015 HOH HOH . 
E 5 HOH A 16 1016 1016 HOH HOH . 
E 5 HOH A 17 1017 1017 HOH HOH . 
E 5 HOH A 18 1018 1018 HOH HOH . 
E 5 HOH A 19 1019 1019 HOH HOH . 
E 5 HOH A 20 1020 1020 HOH HOH . 
E 5 HOH A 21 1021 1021 HOH HOH . 
E 5 HOH A 22 1022 1022 HOH HOH . 
E 5 HOH A 23 1023 1023 HOH HOH . 
E 5 HOH A 24 1024 1024 HOH HOH . 
E 5 HOH A 25 1025 1025 HOH HOH . 
E 5 HOH A 26 1026 1026 HOH HOH . 
E 5 HOH A 27 1027 1027 HOH HOH . 
E 5 HOH A 28 1028 1028 HOH HOH . 
E 5 HOH A 29 1029 1029 HOH HOH . 
E 5 HOH A 30 1030 1030 HOH HOH . 
E 5 HOH A 31 1031 1031 HOH HOH . 
E 5 HOH A 32 1032 1032 HOH HOH . 
E 5 HOH A 33 1033 1033 HOH HOH . 
E 5 HOH A 34 1034 1034 HOH HOH . 
E 5 HOH A 35 1035 1035 HOH HOH . 
E 5 HOH A 36 1036 1036 HOH HOH . 
E 5 HOH A 37 1037 1037 HOH HOH . 
E 5 HOH A 38 1038 1038 HOH HOH . 
E 5 HOH A 39 1039 1039 HOH HOH . 
E 5 HOH A 40 1040 1040 HOH HOH . 
E 5 HOH A 41 1041 1041 HOH HOH . 
E 5 HOH A 42 1042 1042 HOH HOH . 
E 5 HOH A 43 1043 1043 HOH HOH . 
E 5 HOH A 44 1044 1044 HOH HOH . 
E 5 HOH A 45 1045 1045 HOH HOH . 
E 5 HOH A 46 1046 1046 HOH HOH . 
E 5 HOH A 47 1047 1047 HOH HOH . 
E 5 HOH A 48 1048 1048 HOH HOH . 
E 5 HOH A 49 1049 1049 HOH HOH . 
E 5 HOH A 50 1050 1050 HOH HOH . 
E 5 HOH A 51 1051 1051 HOH HOH . 
E 5 HOH A 52 1052 1052 HOH HOH . 
E 5 HOH A 53 1053 1053 HOH HOH . 
E 5 HOH A 54 1054 1054 HOH HOH . 
E 5 HOH A 55 1055 1055 HOH HOH . 
E 5 HOH A 56 1056 1056 HOH HOH . 
E 5 HOH A 57 1057 1057 HOH HOH . 
E 5 HOH A 58 1058 1058 HOH HOH . 
E 5 HOH A 59 1059 1059 HOH HOH . 
E 5 HOH A 60 1060 1060 HOH HOH . 
E 5 HOH A 61 1061 1061 HOH HOH . 
E 5 HOH A 62 1062 1062 HOH HOH . 
E 5 HOH A 63 1063 1063 HOH HOH . 
E 5 HOH A 64 1064 1064 HOH HOH . 
E 5 HOH A 65 1065 1065 HOH HOH . 
E 5 HOH A 66 1066 1066 HOH HOH . 
E 5 HOH A 67 1067 1067 HOH HOH . 
E 5 HOH A 68 1068 1068 HOH HOH . 
E 5 HOH A 69 1069 1069 HOH HOH . 
E 5 HOH A 70 1070 1070 HOH HOH . 
E 5 HOH A 71 1071 1071 HOH HOH . 
E 5 HOH A 72 1072 1072 HOH HOH . 
E 5 HOH A 73 1073 1073 HOH HOH . 
E 5 HOH A 74 1074 1074 HOH HOH . 
E 5 HOH A 75 1075 1075 HOH HOH . 
E 5 HOH A 76 1076 1076 HOH HOH . 
E 5 HOH A 77 1077 1077 HOH HOH . 
E 5 HOH A 78 1078 1078 HOH HOH . 
E 5 HOH A 79 1079 1079 HOH HOH . 
E 5 HOH A 80 1080 1080 HOH HOH . 
E 5 HOH A 81 1081 1081 HOH HOH . 
E 5 HOH A 82 1082 1082 HOH HOH . 
E 5 HOH A 83 1084 1084 HOH HOH . 
E 5 HOH A 84 1085 1085 HOH HOH . 
E 5 HOH A 85 1086 1086 HOH HOH . 
E 5 HOH A 86 1087 1087 HOH HOH . 
E 5 HOH A 87 1088 1088 HOH HOH . 
E 5 HOH A 88 1089 1089 HOH HOH . 
E 5 HOH A 89 1090 1090 HOH HOH . 
E 5 HOH A 90 1091 1091 HOH HOH . 
E 5 HOH A 91 1092 1092 HOH HOH . 
E 5 HOH A 92 1093 1093 HOH HOH . 
E 5 HOH A 93 1094 1094 HOH HOH . 
E 5 HOH A 94 1095 1095 HOH HOH . 
E 5 HOH A 95 1096 1096 HOH HOH . 
E 5 HOH A 96 1097 1097 HOH HOH . 
E 5 HOH A 97 1098 1098 HOH HOH . 
E 5 HOH A 98 1099 1099 HOH HOH . 
E 5 HOH A 99 1100 1100 HOH HOH . 
E 5 HOH A 100 1101 1101 HOH HOH . 
E 5 HOH A 101 1102 1102 HOH HOH . 
E 5 HOH A 102 1103 1103 HOH HOH . 
E 5 HOH A 103 1104 1104 HOH HOH . 
E 5 HOH A 104 1105 1105 HOH HOH . 
E 5 HOH A 105 1106 1106 HOH HOH . 
E 5 HOH A 106 1107 1107 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CHA HEM . . . C 3 16.009 31.08 5.174 1 13.05 ? CHA HEM 160 A 1 
HETATM 2 C CHB HEM . . . C 3 13.936 27.961 8.293 1 10.87 ? CHB HEM 160 A 1 
HETATM 3 C CHC HEM . . . C 3 13.431 24.716 4.705 1 15.35 ? CHC HEM 160 A 1 
HETATM 4 C CHD HEM . . . C 3 15.499 27.827 1.59 1 12.89 ? CHD HEM 160 A 1 
HETATM 5 C C1A HEM . . . C 3 15.48 30.529 6.319 1 11.61 ? C1A HEM 160 A 1 
HETATM 6 C C2A HEM . . . C 3 15.377 31.186 7.61 1 12.04 ? C2A HEM 160 A 1 
HETATM 7 C C3A HEM . . . C 3 14.843 30.299 8.495 1 11.67 ? C3A HEM 160 A 1 
HETATM 8 C C4A HEM . . . C 3 14.532 29.081 7.769 1 11.91 ? C4A HEM 160 A 1 
HETATM 9 C CMA HEM . . . C 3 14.562 30.498 9.982 1 17.51 ? CMA HEM 160 A 1 
HETATM 10 C CAA HEM . . . C 3 15.75 32.649 7.851 1 12.43 ? CAA HEM 160 A 1 
HETATM 11 C CBA HEM . . . C 3 14.586 33.658 7.902 1 18.14 ? CBA HEM 160 A 1 
HETATM 12 C CGA HEM . . . C 3 13.688 33.613 6.67 1 24.79 ? CGA HEM 160 A 1 
HETATM 13 O O1A HEM . . . C 3 14.231 33.918 5.587 1 20.16 ? O1A HEM 160 A 1 
HETATM 14 O O2A HEM . . . C 3 12.5 33.274 6.855 1 22.66 ? O2A HEM 160 A 1 
HETATM 15 C C1B HEM . . . C 3 13.655 26.796 7.617 1 15.65 ? C1B HEM 160 A 1 
HETATM 16 C C2B HEM . . . C 3 13.067 25.599 8.181 1 14.89 ? C2B HEM 160 A 1 
HETATM 17 C C3B HEM . . . C 3 12.889 24.695 7.167 1 16.31 ? C3B HEM 160 A 1 
HETATM 18 C C4B HEM . . . C 3 13.4 25.301 5.948 1 18.1 ? C4B HEM 160 A 1 
HETATM 19 C CMB HEM . . . C 3 12.711 25.423 9.655 1 20.55 ? CMB HEM 160 A 1 
HETATM 20 C CAB HEM . . . C 3 12.322 23.389 7.099 1 19.83 ? CAB HEM 160 A 1 
HETATM 21 C CBB HEM . . . C 3 12.568 22.427 8.153 1 20.68 ? CBB HEM 160 A 1 
HETATM 22 C C1C HEM . . . C 3 14.041 25.232 3.583 1 12.1 ? C1C HEM 160 A 1 
HETATM 23 C C2C HEM . . . C 3 14.206 24.541 2.316 1 16 ? C2C HEM 160 A 1 
HETATM 24 C C3C HEM . . . C 3 14.783 25.411 1.431 1 13.05 ? C3C HEM 160 A 1 
HETATM 25 C C4C HEM . . . C 3 14.97 26.677 2.125 1 10.38 ? C4C HEM 160 A 1 
HETATM 26 C CMC HEM . . . C 3 13.762 23.101 2.086 1 16.73 ? CMC HEM 160 A 1 
HETATM 27 C CAC HEM . . . C 3 15.191 25.323 0.068 1 18.94 ? CAC HEM 160 A 1 
HETATM 28 C CBC HEM . . . C 3 15.475 24.057 -0.56 1 17.95 ? CBC HEM 160 A 1 
HETATM 29 C C1D HEM . . . C 3 15.837 28.966 2.279 1 10.5 ? C1D HEM 160 A 1 
HETATM 30 C C2D HEM . . . C 3 16.554 30.113 1.746 1 13.78 ? C2D HEM 160 A 1 
HETATM 31 C C3D HEM . . . C 3 16.736 31 2.761 1 19.4 ? C3D HEM 160 A 1 
HETATM 32 C C4D HEM . . . C 3 16.071 30.477 3.94 1 23.11 ? C4D HEM 160 A 1 
HETATM 33 C CMD HEM . . . C 3 17.017 30.22 0.292 1 14.71 ? CMD HEM 160 A 1 
HETATM 34 C CAD HEM . . . C 3 17.575 32.286 2.764 1 16.71 ? CAD HEM 160 A 1 
HETATM 35 C CBD HEM . . . C 3 19.055 32.153 3.127 1 16.72 ? CBD HEM 160 A 1 
HETATM 36 C CGD HEM . . . C 3 19.878 33.422 3.021 1 13.27 ? CGD HEM 160 A 1 
HETATM 37 O O1D HEM . . . C 3 20.045 33.892 1.873 1 21.68 ? O1D HEM 160 A 1 
HETATM 38 O O2D HEM . . . C 3 20.339 33.879 4.092 1 22.08 ? O2D HEM 160 A 1 
HETATM 39 N NA HEM . . . C 3 14.935 29.276 6.465 1 12.62 ? NA HEM 160 A 1 
HETATM 40 N NB HEM . . . C 3 13.865 26.55 6.279 1 12.66 ? NB HEM 160 A 1 
HETATM 41 N NC HEM . . . C 3 14.535 26.499 3.417 1 13.57 ? NC HEM 160 A 1 
HETATM 42 N ND HEM . . . C 3 15.568 29.243 3.6 1 15.36 ? ND HEM 160 A 1 
HETATM 43 FE FE HEM . . . C 3 14.78 27.922 4.931 1 15.55 ? FE HEM 160 A 1 
#
_model_server_stats.io_time_ms              46 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           368 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           43 
#