data_1HKB # _model_server_result.job_id 9XZ5cnojepBcu0mY2DhD0w _model_server_result.datetime_utc '2024-12-10 15:33:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1hkb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":922}' # _entry.id 1HKB # _exptl.entry_id 1HKB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 92 _cell.angle_gamma 90 _cell.entry_id 1HKB _cell.length_a 83 _cell.length_b 122 _cell.length_c 123 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1HKB _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,O 1 1 B,I,J,K,L,M,N,P 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 H N N ? 4 M N N ? 4 N N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O LEU 242 A LEU 242 1_555 G CA CA . A CA 922 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.901 ? metalc ? metalc2 A O ILE 245 A ILE 245 1_555 G CA CA . A CA 922 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.671 ? metalc ? metalc3 A O VAL 248 A VAL 248 1_555 G CA CA . A CA 922 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.515 ? metalc ? metalc4 A O GLY 250 A GLY 250 1_555 G CA CA . A CA 922 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.682 ? metalc ? metalc5 A O MET 690 A MET 690 1_555 H CA CA . A CA 923 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.626 ? metalc ? metalc6 A O VAL 693 A VAL 693 1_555 H CA CA . A CA 923 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.661 ? metalc ? metalc7 A O VAL 696 A VAL 696 1_555 H CA CA . A CA 923 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.472 ? metalc ? metalc8 A O GLY 698 A GLY 698 1_555 H CA CA . A CA 923 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.533 ? metalc ? metalc9 B O LEU 242 B LEU 242 1_555 M CA CA . B CA 922 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.959 ? metalc ? metalc10 B O ILE 245 B ILE 245 1_555 M CA CA . B CA 922 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.817 ? metalc ? metalc11 B O VAL 248 B VAL 248 1_555 M CA CA . B CA 922 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.889 ? metalc ? metalc12 B O GLY 250 B GLY 250 1_555 M CA CA . B CA 922 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.712 ? metalc ? metalc13 B O MET 690 B MET 690 1_555 N CA CA . B CA 923 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.818 ? metalc ? metalc14 B O VAL 693 B VAL 693 1_555 N CA CA . B CA 923 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.687 ? metalc ? metalc15 B O VAL 696 B VAL 696 1_555 N CA CA . B CA 923 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.709 ? metalc ? metalc16 B O GLY 698 B GLY 698 1_555 N CA CA . B CA 923 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.676 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1HKB _atom_sites.fract_transf_matrix[1][1] 0.012048 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000421 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008197 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008135 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 BGC A 1 918 915 BGC BGC . D 3 G6P A 1 919 916 G6P G6P . E 2 BGC A 1 920 917 BGC BGC . F 3 G6P A 1 921 918 G6P G6P . G 4 CA A 1 922 919 CA CA . H 4 CA A 1 923 920 CA CA . I 2 BGC B 1 918 915 BGC BGC . J 3 G6P B 1 919 916 G6P G6P . K 2 BGC B 1 920 917 BGC BGC . L 3 G6P B 1 921 918 G6P G6P . M 4 CA B 1 922 919 CA CA . N 4 CA B 1 923 920 CA CA . O 5 HOH A 1 1006 1006 HOH HOH . O 5 HOH A 2 1007 1007 HOH HOH . O 5 HOH A 3 1010 1010 HOH HOH . O 5 HOH A 4 1011 1011 HOH HOH . O 5 HOH A 5 1013 1013 HOH HOH . O 5 HOH A 6 1015 1015 HOH HOH . O 5 HOH A 7 1018 1018 HOH HOH . O 5 HOH A 8 1019 1019 HOH HOH . O 5 HOH A 9 1025 1025 HOH HOH . O 5 HOH A 10 1027 1027 HOH HOH . O 5 HOH A 11 1029 1029 HOH HOH . O 5 HOH A 12 1034 1034 HOH HOH . O 5 HOH A 13 1037 1037 HOH HOH . O 5 HOH A 14 1038 1038 HOH HOH . O 5 HOH A 15 1040 1040 HOH HOH . O 5 HOH A 16 1041 1041 HOH HOH . O 5 HOH A 17 1043 1043 HOH HOH . O 5 HOH A 18 1044 1044 HOH HOH . O 5 HOH A 19 1051 1051 HOH HOH . O 5 HOH A 20 1054 1054 HOH HOH . O 5 HOH A 21 1056 1056 HOH HOH . O 5 HOH A 22 1060 1060 HOH HOH . O 5 HOH A 23 1062 1062 HOH HOH . O 5 HOH A 24 1063 1063 HOH HOH . O 5 HOH A 25 1064 1064 HOH HOH . O 5 HOH A 26 1067 1067 HOH HOH . O 5 HOH A 27 1071 1071 HOH HOH . O 5 HOH A 28 1072 1072 HOH HOH . O 5 HOH A 29 1076 1076 HOH HOH . O 5 HOH A 30 1077 1077 HOH HOH . O 5 HOH A 31 1081 1081 HOH HOH . O 5 HOH A 32 1082 1082 HOH HOH . O 5 HOH A 33 1083 1083 HOH HOH . O 5 HOH A 34 1086 1086 HOH HOH . O 5 HOH A 35 1087 1087 HOH HOH . O 5 HOH A 36 1088 1088 HOH HOH . O 5 HOH A 37 1089 1089 HOH HOH . O 5 HOH A 38 1090 1090 HOH HOH . O 5 HOH A 39 1091 1091 HOH HOH . O 5 HOH A 40 1093 1093 HOH HOH . O 5 HOH A 41 1094 1094 HOH HOH . O 5 HOH A 42 1095 1095 HOH HOH . O 5 HOH A 43 1096 1096 HOH HOH . O 5 HOH A 44 1097 1097 HOH HOH . O 5 HOH A 45 1099 1099 HOH HOH . O 5 HOH A 46 1100 1100 HOH HOH . O 5 HOH A 47 1101 1101 HOH HOH . O 5 HOH A 48 1102 1102 HOH HOH . O 5 HOH A 49 1103 1103 HOH HOH . O 5 HOH A 50 1105 1105 HOH HOH . O 5 HOH A 51 1111 1111 HOH HOH . O 5 HOH A 52 1113 1113 HOH HOH . O 5 HOH A 53 1115 1115 HOH HOH . O 5 HOH A 54 1117 1117 HOH HOH . O 5 HOH A 55 1128 1128 HOH HOH . O 5 HOH A 56 1145 1145 HOH HOH . P 5 HOH B 1 1005 1005 HOH HOH . P 5 HOH B 2 1008 1008 HOH HOH . P 5 HOH B 3 1009 1009 HOH HOH . P 5 HOH B 4 1012 1012 HOH HOH . P 5 HOH B 5 1014 1014 HOH HOH . P 5 HOH B 6 1016 1016 HOH HOH . P 5 HOH B 7 1017 1017 HOH HOH . P 5 HOH B 8 1020 1020 HOH HOH . P 5 HOH B 9 1021 1021 HOH HOH . P 5 HOH B 10 1022 1022 HOH HOH . P 5 HOH B 11 1023 1023 HOH HOH . P 5 HOH B 12 1024 1024 HOH HOH . P 5 HOH B 13 1026 1026 HOH HOH . P 5 HOH B 14 1028 1028 HOH HOH . P 5 HOH B 15 1030 1030 HOH HOH . P 5 HOH B 16 1031 1031 HOH HOH . P 5 HOH B 17 1032 1032 HOH HOH . P 5 HOH B 18 1033 1033 HOH HOH . P 5 HOH B 19 1035 1035 HOH HOH . P 5 HOH B 20 1036 1036 HOH HOH . P 5 HOH B 21 1039 1039 HOH HOH . P 5 HOH B 22 1042 1042 HOH HOH . P 5 HOH B 23 1045 1045 HOH HOH . P 5 HOH B 24 1046 1046 HOH HOH . P 5 HOH B 25 1047 1047 HOH HOH . P 5 HOH B 26 1048 1048 HOH HOH . P 5 HOH B 27 1049 1049 HOH HOH . P 5 HOH B 28 1050 1050 HOH HOH . P 5 HOH B 29 1052 1052 HOH HOH . P 5 HOH B 30 1053 1053 HOH HOH . P 5 HOH B 31 1055 1055 HOH HOH . P 5 HOH B 32 1057 1057 HOH HOH . P 5 HOH B 33 1058 1058 HOH HOH . P 5 HOH B 34 1059 1059 HOH HOH . P 5 HOH B 35 1061 1061 HOH HOH . P 5 HOH B 36 1065 1065 HOH HOH . P 5 HOH B 37 1066 1066 HOH HOH . P 5 HOH B 38 1068 1068 HOH HOH . P 5 HOH B 39 1069 1069 HOH HOH . P 5 HOH B 40 1070 1070 HOH HOH . P 5 HOH B 41 1073 1073 HOH HOH . P 5 HOH B 42 1074 1074 HOH HOH . P 5 HOH B 43 1075 1075 HOH HOH . P 5 HOH B 44 1078 1078 HOH HOH . P 5 HOH B 45 1079 1079 HOH HOH . P 5 HOH B 46 1080 1080 HOH HOH . P 5 HOH B 47 1084 1084 HOH HOH . P 5 HOH B 48 1085 1085 HOH HOH . P 5 HOH B 49 1092 1092 HOH HOH . P 5 HOH B 50 1098 1098 HOH HOH . P 5 HOH B 51 1104 1104 HOH HOH . P 5 HOH B 52 1106 1106 HOH HOH . P 5 HOH B 53 1107 1107 HOH HOH . P 5 HOH B 54 1108 1108 HOH HOH . P 5 HOH B 55 1109 1109 HOH HOH . P 5 HOH B 56 1110 1110 HOH HOH . P 5 HOH B 57 1112 1112 HOH HOH . P 5 HOH B 58 1114 1114 HOH HOH . P 5 HOH B 59 1116 1116 HOH HOH . P 5 HOH B 60 1118 1118 HOH HOH . P 5 HOH B 61 1119 1119 HOH HOH . P 5 HOH B 62 1120 1120 HOH HOH . P 5 HOH B 63 1121 1121 HOH HOH . P 5 HOH B 64 1122 1122 HOH HOH . P 5 HOH B 65 1123 1123 HOH HOH . P 5 HOH B 66 1124 1124 HOH HOH . P 5 HOH B 67 1125 1125 HOH HOH . P 5 HOH B 68 1126 1126 HOH HOH . P 5 HOH B 69 1127 1127 HOH HOH . P 5 HOH B 70 1129 1129 HOH HOH . P 5 HOH B 71 1130 1130 HOH HOH . P 5 HOH B 72 1131 1131 HOH HOH . P 5 HOH B 73 1132 1132 HOH HOH . P 5 HOH B 74 1133 1133 HOH HOH . P 5 HOH B 75 1134 1134 HOH HOH . P 5 HOH B 76 1135 1135 HOH HOH . P 5 HOH B 77 1136 1136 HOH HOH . P 5 HOH B 78 1137 1137 HOH HOH . P 5 HOH B 79 1138 1138 HOH HOH . P 5 HOH B 80 1139 1139 HOH HOH . P 5 HOH B 81 1140 1140 HOH HOH . P 5 HOH B 82 1141 1141 HOH HOH . P 5 HOH B 83 1142 1142 HOH HOH . P 5 HOH B 84 1143 1143 HOH HOH . P 5 HOH B 85 1144 1144 HOH HOH . P 5 HOH B 86 1146 1146 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id M _atom_site.label_entity_id 4 _atom_site.Cartn_x 45.086 _atom_site.Cartn_y -12.405 _atom_site.Cartn_z 44.493 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 70.38 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 922 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 36 _model_server_stats.query_time_ms 407 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 1 #