data_1HKC # _model_server_result.job_id EzUePHpyGlie-ExtoAGDoA _model_server_result.datetime_utc '2024-11-14 23:48:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1hkc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":918}' # _entry.id 1HKC # _exptl.entry_id 1HKC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 180.156 _entity.id 2 _entity.src_method man _entity.type non-polymer _entity.pdbx_description beta-D-glucopyranose _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1HKC _cell.length_a 175.09 _cell.length_b 175.09 _cell.length_c 99.47 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1HKC _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_675 x-y+1,-y+2,-z+1/3 1 0 0 0 -1 0 0 0 -1 0 303.264776 33.156667 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O LEU 242 A LEU 242 1_555 E K K . A K 921 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.915 ? metalc ? metalc2 A O ILE 245 A ILE 245 1_555 E K K . A K 921 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.209 ? metalc ? metalc3 A O VAL 248 A VAL 248 1_555 E K K . A K 921 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.813 ? metalc ? metalc4 A O GLY 250 A GLY 250 1_555 E K K . A K 921 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.187 ? metalc ? metalc5 A O MET 690 A MET 690 1_555 F K K . A K 922 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.999 ? metalc ? metalc6 A O VAL 693 A VAL 693 1_555 F K K . A K 922 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.118 ? metalc ? metalc7 A O VAL 696 A VAL 696 1_555 F K K . A K 922 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.924 ? metalc ? metalc8 A O GLY 698 A GLY 698 1_555 F K K . A K 922 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.22 ? metalc ? metalc9 A OD1 ASP 699 A ASP 699 1_555 F K K . A K 922 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.502 ? metalc ? metalc10 E K K . A K 921 1_555 G O HOH . A HOH 1058 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.269 ? # _chem_comp.formula 'C6 H12 O6' _chem_comp.formula_weight 180.156 _chem_comp.id BGC _chem_comp.mon_nstd_flag . _chem_comp.name beta-D-glucopyranose _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms beta-D-glucose;D-glucose;glucose # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 C3 BGC sing 70 n n C2 C1 BGC sing 71 n n C2 O2 BGC sing 72 n n C2 H2 BGC sing 73 n n C3 C4 BGC sing 74 n n C3 O3 BGC sing 75 n n C3 H3 BGC sing 76 n n C4 C5 BGC sing 77 n n C4 O4 BGC sing 78 n n C4 H4 BGC sing 79 n n C5 C6 BGC sing 80 n n C5 O5 BGC sing 81 n n C5 H5 BGC sing 82 n n C6 O6 BGC sing 83 n n C6 H61 BGC sing 84 n n C6 H62 BGC sing 85 n n C1 O1 BGC sing 86 n n C1 O5 BGC sing 87 n n C1 H1 BGC sing 88 n n O1 HO1 BGC sing 89 n n O2 HO2 BGC sing 90 n n O3 HO3 BGC sing 91 n n O4 HO4 BGC sing 92 n n O6 HO6 BGC sing 93 n n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.identifier _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version BGC DGlcpb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 BGC b-D-glucopyranose 'COMMON NAME' GMML 1 BGC b-D-Glcp 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 BGC Glc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 # _atom_sites.entry_id 1HKC _atom_sites.fract_transf_matrix[1][1] 0.005711 _atom_sites.fract_transf_matrix[1][2] 0.003297 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006595 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010053 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BGC A 1 918 915 BGC BGC . C 3 PO4 A 1 919 916 PO4 PO4 . D 3 PO4 A 1 920 917 PO4 PO4 . E 4 K A 1 921 918 K K . F 4 K A 1 922 919 K K . G 5 HOH A 1 923 920 HOH HOH . G 5 HOH A 2 924 921 HOH HOH . G 5 HOH A 3 925 922 HOH HOH . G 5 HOH A 4 926 923 HOH HOH . G 5 HOH A 5 927 924 HOH HOH . G 5 HOH A 6 928 925 HOH HOH . G 5 HOH A 7 929 926 HOH HOH . G 5 HOH A 8 930 927 HOH HOH . G 5 HOH A 9 931 928 HOH HOH . G 5 HOH A 10 932 929 HOH HOH . G 5 HOH A 11 933 930 HOH HOH . G 5 HOH A 12 934 931 HOH HOH . G 5 HOH A 13 935 932 HOH HOH . G 5 HOH A 14 936 933 HOH HOH . G 5 HOH A 15 937 934 HOH HOH . G 5 HOH A 16 938 935 HOH HOH . G 5 HOH A 17 939 936 HOH HOH . G 5 HOH A 18 940 937 HOH HOH . G 5 HOH A 19 941 938 HOH HOH . G 5 HOH A 20 942 939 HOH HOH . G 5 HOH A 21 943 940 HOH HOH . G 5 HOH A 22 944 941 HOH HOH . G 5 HOH A 23 945 942 HOH HOH . G 5 HOH A 24 946 943 HOH HOH . G 5 HOH A 25 947 944 HOH HOH . G 5 HOH A 26 948 945 HOH HOH . G 5 HOH A 27 949 946 HOH HOH . G 5 HOH A 28 950 947 HOH HOH . G 5 HOH A 29 951 948 HOH HOH . G 5 HOH A 30 952 949 HOH HOH . G 5 HOH A 31 953 950 HOH HOH . G 5 HOH A 32 954 951 HOH HOH . G 5 HOH A 33 955 952 HOH HOH . G 5 HOH A 34 956 953 HOH HOH . G 5 HOH A 35 957 954 HOH HOH . G 5 HOH A 36 958 955 HOH HOH . G 5 HOH A 37 959 956 HOH HOH . G 5 HOH A 38 960 957 HOH HOH . G 5 HOH A 39 961 958 HOH HOH . G 5 HOH A 40 962 959 HOH HOH . G 5 HOH A 41 963 960 HOH HOH . G 5 HOH A 42 964 961 HOH HOH . G 5 HOH A 43 965 962 HOH HOH . G 5 HOH A 44 966 963 HOH HOH . G 5 HOH A 45 967 964 HOH HOH . G 5 HOH A 46 968 965 HOH HOH . G 5 HOH A 47 969 966 HOH HOH . G 5 HOH A 48 970 967 HOH HOH . G 5 HOH A 49 971 968 HOH HOH . G 5 HOH A 50 972 969 HOH HOH . G 5 HOH A 51 973 970 HOH HOH . G 5 HOH A 52 974 971 HOH HOH . G 5 HOH A 53 975 972 HOH HOH . G 5 HOH A 54 976 973 HOH HOH . G 5 HOH A 55 977 974 HOH HOH . G 5 HOH A 56 978 975 HOH HOH . G 5 HOH A 57 979 976 HOH HOH . G 5 HOH A 58 980 977 HOH HOH . G 5 HOH A 59 981 978 HOH HOH . G 5 HOH A 60 982 979 HOH HOH . G 5 HOH A 61 983 980 HOH HOH . G 5 HOH A 62 984 981 HOH HOH . G 5 HOH A 63 985 982 HOH HOH . G 5 HOH A 64 986 983 HOH HOH . G 5 HOH A 65 987 984 HOH HOH . G 5 HOH A 66 988 985 HOH HOH . G 5 HOH A 67 989 986 HOH HOH . G 5 HOH A 68 990 987 HOH HOH . G 5 HOH A 69 991 988 HOH HOH . G 5 HOH A 70 992 989 HOH HOH . G 5 HOH A 71 993 990 HOH HOH . G 5 HOH A 72 994 991 HOH HOH . G 5 HOH A 73 995 992 HOH HOH . G 5 HOH A 74 996 993 HOH HOH . G 5 HOH A 75 997 994 HOH HOH . G 5 HOH A 76 998 995 HOH HOH . G 5 HOH A 77 999 996 HOH HOH . G 5 HOH A 78 1000 997 HOH HOH . G 5 HOH A 79 1001 998 HOH HOH . G 5 HOH A 80 1002 999 HOH HOH . G 5 HOH A 81 1003 1000 HOH HOH . G 5 HOH A 82 1004 1001 HOH HOH . G 5 HOH A 83 1005 1002 HOH HOH . G 5 HOH A 84 1006 1003 HOH HOH . G 5 HOH A 85 1007 1004 HOH HOH . G 5 HOH A 86 1008 1005 HOH HOH . G 5 HOH A 87 1009 1006 HOH HOH . G 5 HOH A 88 1010 1007 HOH HOH . G 5 HOH A 89 1011 1008 HOH HOH . G 5 HOH A 90 1012 1009 HOH HOH . G 5 HOH A 91 1013 1010 HOH HOH . G 5 HOH A 92 1014 1011 HOH HOH . G 5 HOH A 93 1015 1012 HOH HOH . G 5 HOH A 94 1016 1013 HOH HOH . G 5 HOH A 95 1017 1014 HOH HOH . G 5 HOH A 96 1018 1015 HOH HOH . G 5 HOH A 97 1019 1016 HOH HOH . G 5 HOH A 98 1020 1017 HOH HOH . G 5 HOH A 99 1021 1018 HOH HOH . G 5 HOH A 100 1022 1019 HOH HOH . G 5 HOH A 101 1023 1020 HOH HOH . G 5 HOH A 102 1024 1021 HOH HOH . G 5 HOH A 103 1025 1022 HOH HOH . G 5 HOH A 104 1026 1023 HOH HOH . G 5 HOH A 105 1027 1024 HOH HOH . G 5 HOH A 106 1028 1025 HOH HOH . G 5 HOH A 107 1029 1026 HOH HOH . G 5 HOH A 108 1030 1027 HOH HOH . G 5 HOH A 109 1031 1028 HOH HOH . G 5 HOH A 110 1032 1029 HOH HOH . G 5 HOH A 111 1033 1030 HOH HOH . G 5 HOH A 112 1034 1031 HOH HOH . G 5 HOH A 113 1035 1032 HOH HOH . G 5 HOH A 114 1036 1033 HOH HOH . G 5 HOH A 115 1037 1034 HOH HOH . G 5 HOH A 116 1038 1035 HOH HOH . G 5 HOH A 117 1039 1036 HOH HOH . G 5 HOH A 118 1040 1037 HOH HOH . G 5 HOH A 119 1041 1038 HOH HOH . G 5 HOH A 120 1042 1039 HOH HOH . G 5 HOH A 121 1043 1040 HOH HOH . G 5 HOH A 122 1044 1041 HOH HOH . G 5 HOH A 123 1045 1042 HOH HOH . G 5 HOH A 124 1046 1043 HOH HOH . G 5 HOH A 125 1047 1044 HOH HOH . G 5 HOH A 126 1048 1045 HOH HOH . G 5 HOH A 127 1049 1046 HOH HOH . G 5 HOH A 128 1050 1047 HOH HOH . G 5 HOH A 129 1051 1048 HOH HOH . G 5 HOH A 130 1052 1049 HOH HOH . G 5 HOH A 131 1053 1050 HOH HOH . G 5 HOH A 132 1054 1051 HOH HOH . G 5 HOH A 133 1055 1052 HOH HOH . G 5 HOH A 134 1056 1053 HOH HOH . G 5 HOH A 135 1057 1054 HOH HOH . G 5 HOH A 136 1058 1055 HOH HOH . G 5 HOH A 137 1059 1056 HOH HOH . G 5 HOH A 138 1060 1057 HOH HOH . G 5 HOH A 139 1061 1058 HOH HOH . G 5 HOH A 140 1062 1059 HOH HOH . G 5 HOH A 141 1063 1060 HOH HOH . G 5 HOH A 142 1064 1061 HOH HOH . G 5 HOH A 143 1065 1062 HOH HOH . G 5 HOH A 144 1066 1063 HOH HOH . G 5 HOH A 145 1067 1064 HOH HOH . G 5 HOH A 146 1068 1065 HOH HOH . G 5 HOH A 147 1069 1066 HOH HOH . G 5 HOH A 148 1070 1067 HOH HOH . G 5 HOH A 149 1071 1068 HOH HOH . G 5 HOH A 150 1072 1069 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 BGC . . . B 2 -12.326 124.301 3.254 1 38.65 ? C2 BGC 918 A 1 HETATM 2 C C3 BGC . . . B 2 -11.893 124.392 4.72 1 39.94 ? C3 BGC 918 A 1 HETATM 3 C C4 BGC . . . B 2 -11.369 123.041 5.254 1 38.11 ? C4 BGC 918 A 1 HETATM 4 C C5 BGC . . . B 2 -10.431 122.328 4.255 1 37.15 ? C5 BGC 918 A 1 HETATM 5 C C6 BGC . . . B 2 -10.158 120.877 4.632 1 34.77 ? C6 BGC 918 A 1 HETATM 6 C C1 BGC . . . B 2 -11.222 123.653 2.438 1 42.43 ? C1 BGC 918 A 1 HETATM 7 O O1 BGC . . . B 2 -11.615 123.571 1.116 1 55.24 ? O1 BGC 918 A 1 HETATM 8 O O2 BGC . . . B 2 -12.576 125.598 2.745 1 33.6 ? O2 BGC 918 A 1 HETATM 9 O O3 BGC . . . B 2 -12.995 124.815 5.514 1 28.04 ? O3 BGC 918 A 1 HETATM 10 O O4 BGC . . . B 2 -10.652 123.272 6.46 1 26.86 ? O4 BGC 918 A 1 HETATM 11 O O5 BGC . . . B 2 -10.995 122.326 2.925 1 46.65 ? O5 BGC 918 A 1 HETATM 12 O O6 BGC . . . B 2 -11.326 120.071 4.529 1 30.3 ? O6 BGC 918 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 227 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 12 #