data_1HM0 # _model_server_result.job_id EcY90tgVFLnLLHAKikLb0Q _model_server_result.datetime_utc '2024-11-15 01:08:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1hm0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":903}' # _entry.id 1HM0 # _exptl.entry_id 1HM0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1HM0 _cell.length_a 92.715 _cell.length_b 92.715 _cell.length_c 280.387 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1HM0 _symmetry.cell_setting trigonal _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA trimeric 3 author_and_software_defined_assembly 1 PISA trimeric 3 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,I 1 1,2,3 B,F,G,H,J 2 1,4,5 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_665 -y+1,x-y+1,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 46.3575 80.293545 0 3 'crystal symmetry operation' 3_565 -x+y,-x+1,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 -46.3575 80.293545 0 4 'crystal symmetry operation' 2_655 -y+1,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 92.715 0 0 5 'crystal symmetry operation' 3_665 -x+y+1,-x+1,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 46.3575 80.293545 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 407 A ASP 398 1_555 D CA CA . A CA 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.507 ? metalc ? metalc2 A OD1 ASN 414 A ASN 405 1_555 C CA CA . A CA 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.504 ? metalc ? metalc3 A OD1 ASN 414 A ASN 405 2_665 C CA CA . A CA 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.505 ? metalc ? metalc4 A OD1 ASN 414 A ASN 405 3_565 C CA CA . A CA 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.518 ? metalc ? metalc5 D CA CA . A CA 902 1_555 I O HOH . A HOH 952 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.092 ? metalc ? metalc6 E CA CA . A CA 903 1_555 I O HOH . A HOH 941 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.291 ? metalc ? metalc7 E CA CA . A CA 903 1_555 I O HOH . A HOH 941 2_655 ? ? ? ? ? ? ? ? ? ? ? ? 3.285 ? metalc ? metalc8 E CA CA . A CA 903 1_555 I O HOH . A HOH 941 3_665 ? ? ? ? ? ? ? ? ? ? ? ? 3.291 ? metalc ? metalc9 B OD2 ASP 407 B ASP 398 1_555 G CA CA . B CA 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.516 ? metalc ? metalc10 B OD1 ASN 414 B ASN 405 1_555 F CA CA . B CA 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.241 ? metalc ? metalc11 B OD1 ASN 414 B ASN 405 2_655 F CA CA . B CA 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.245 ? metalc ? metalc12 B OD1 ASN 414 B ASN 405 3_665 F CA CA . B CA 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.263 ? metalc ? metalc13 H CA CA . B CA 903 1_555 J O HOH . B HOH 1048 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.605 ? metalc ? metalc14 H CA CA . B CA 903 1_555 J O HOH . B HOH 1048 2_665 ? ? ? ? ? ? ? ? ? ? ? ? 2.625 ? metalc ? metalc15 H CA CA . B CA 903 1_555 J O HOH . B HOH 1048 3_565 ? ? ? ? ? ? ? ? ? ? ? ? 2.61 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1HM0 _atom_sites.fract_transf_matrix[1][1] 0.010786 _atom_sites.fract_transf_matrix[1][2] 0.006227 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012454 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003566 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CA A 1 901 901 CA CA . D 2 CA A 1 902 902 CA CA . E 2 CA A 1 903 903 CA CA . F 2 CA B 1 901 901 CA CA . G 2 CA B 1 902 902 CA CA . H 2 CA B 1 903 903 CA CA . I 3 HOH A 1 904 1 HOH HOH . I 3 HOH A 2 905 2 HOH HOH . I 3 HOH A 3 906 3 HOH HOH . I 3 HOH A 4 907 4 HOH HOH . I 3 HOH A 5 908 5 HOH HOH . I 3 HOH A 6 909 6 HOH HOH . I 3 HOH A 7 910 7 HOH HOH . I 3 HOH A 8 911 8 HOH HOH . I 3 HOH A 9 912 9 HOH HOH . I 3 HOH A 10 913 10 HOH HOH . I 3 HOH A 11 914 11 HOH HOH . I 3 HOH A 12 915 12 HOH HOH . I 3 HOH A 13 916 13 HOH HOH . I 3 HOH A 14 917 14 HOH HOH . I 3 HOH A 15 918 15 HOH HOH . I 3 HOH A 16 919 16 HOH HOH . I 3 HOH A 17 920 17 HOH HOH . I 3 HOH A 18 921 18 HOH HOH . I 3 HOH A 19 922 19 HOH HOH . I 3 HOH A 20 923 20 HOH HOH . I 3 HOH A 21 924 21 HOH HOH . I 3 HOH A 22 925 22 HOH HOH . I 3 HOH A 23 926 23 HOH HOH . I 3 HOH A 24 927 24 HOH HOH . I 3 HOH A 25 928 25 HOH HOH . I 3 HOH A 26 929 26 HOH HOH . I 3 HOH A 27 930 27 HOH HOH . I 3 HOH A 28 931 28 HOH HOH . I 3 HOH A 29 932 29 HOH HOH . I 3 HOH A 30 933 30 HOH HOH . I 3 HOH A 31 934 31 HOH HOH . I 3 HOH A 32 935 32 HOH HOH . I 3 HOH A 33 936 33 HOH HOH . I 3 HOH A 34 937 34 HOH HOH . I 3 HOH A 35 938 35 HOH HOH . I 3 HOH A 36 939 36 HOH HOH . I 3 HOH A 37 940 37 HOH HOH . I 3 HOH A 38 941 38 HOH HOH . I 3 HOH A 39 942 39 HOH HOH . I 3 HOH A 40 943 40 HOH HOH . I 3 HOH A 41 944 41 HOH HOH . I 3 HOH A 42 945 42 HOH HOH . I 3 HOH A 43 946 43 HOH HOH . I 3 HOH A 44 947 44 HOH HOH . I 3 HOH A 45 948 45 HOH HOH . I 3 HOH A 46 949 46 HOH HOH . I 3 HOH A 47 950 47 HOH HOH . I 3 HOH A 48 951 48 HOH HOH . I 3 HOH A 49 952 49 HOH HOH . I 3 HOH A 50 953 50 HOH HOH . I 3 HOH A 51 954 51 HOH HOH . I 3 HOH A 52 955 52 HOH HOH . I 3 HOH A 53 956 53 HOH HOH . I 3 HOH A 54 957 54 HOH HOH . I 3 HOH A 55 958 55 HOH HOH . I 3 HOH A 56 959 56 HOH HOH . I 3 HOH A 57 960 57 HOH HOH . I 3 HOH A 58 961 58 HOH HOH . I 3 HOH A 59 962 59 HOH HOH . I 3 HOH A 60 963 60 HOH HOH . I 3 HOH A 61 964 61 HOH HOH . I 3 HOH A 62 965 62 HOH HOH . I 3 HOH A 63 966 63 HOH HOH . I 3 HOH A 64 967 64 HOH HOH . I 3 HOH A 65 968 65 HOH HOH . I 3 HOH A 66 969 66 HOH HOH . I 3 HOH A 67 970 67 HOH HOH . I 3 HOH A 68 971 68 HOH HOH . I 3 HOH A 69 972 69 HOH HOH . I 3 HOH A 70 973 70 HOH HOH . I 3 HOH A 71 974 71 HOH HOH . I 3 HOH A 72 975 72 HOH HOH . I 3 HOH A 73 976 73 HOH HOH . I 3 HOH A 74 977 74 HOH HOH . I 3 HOH A 75 978 75 HOH HOH . I 3 HOH A 76 979 76 HOH HOH . I 3 HOH A 77 980 77 HOH HOH . I 3 HOH A 78 981 78 HOH HOH . I 3 HOH A 79 982 79 HOH HOH . I 3 HOH A 80 983 80 HOH HOH . I 3 HOH A 81 984 81 HOH HOH . I 3 HOH A 82 985 82 HOH HOH . I 3 HOH A 83 986 83 HOH HOH . I 3 HOH A 84 987 84 HOH HOH . I 3 HOH A 85 988 85 HOH HOH . I 3 HOH A 86 989 86 HOH HOH . I 3 HOH A 87 990 87 HOH HOH . I 3 HOH A 88 991 88 HOH HOH . I 3 HOH A 89 992 89 HOH HOH . I 3 HOH A 90 993 90 HOH HOH . I 3 HOH A 91 994 91 HOH HOH . I 3 HOH A 92 995 92 HOH HOH . I 3 HOH A 93 996 93 HOH HOH . I 3 HOH A 94 997 94 HOH HOH . I 3 HOH A 95 998 95 HOH HOH . I 3 HOH A 96 999 96 HOH HOH . I 3 HOH A 97 1000 97 HOH HOH . J 3 HOH B 1 1001 1001 HOH HOH . J 3 HOH B 2 1002 1002 HOH HOH . J 3 HOH B 3 1003 1003 HOH HOH . J 3 HOH B 4 1004 1004 HOH HOH . J 3 HOH B 5 1005 1005 HOH HOH . J 3 HOH B 6 1006 1006 HOH HOH . J 3 HOH B 7 1007 1007 HOH HOH . J 3 HOH B 8 1008 1008 HOH HOH . J 3 HOH B 9 1009 1009 HOH HOH . J 3 HOH B 10 1010 1010 HOH HOH . J 3 HOH B 11 1011 1011 HOH HOH . J 3 HOH B 12 1012 1012 HOH HOH . J 3 HOH B 13 1013 1013 HOH HOH . J 3 HOH B 14 1014 1014 HOH HOH . J 3 HOH B 15 1015 1015 HOH HOH . J 3 HOH B 16 1016 1016 HOH HOH . J 3 HOH B 17 1017 1017 HOH HOH . J 3 HOH B 18 1018 1018 HOH HOH . J 3 HOH B 19 1019 1019 HOH HOH . J 3 HOH B 20 1020 1020 HOH HOH . J 3 HOH B 21 1021 1021 HOH HOH . J 3 HOH B 22 1022 1022 HOH HOH . J 3 HOH B 23 1023 1023 HOH HOH . J 3 HOH B 24 1024 1024 HOH HOH . J 3 HOH B 25 1025 1025 HOH HOH . J 3 HOH B 26 1026 1026 HOH HOH . J 3 HOH B 27 1027 1027 HOH HOH . J 3 HOH B 28 1028 1028 HOH HOH . J 3 HOH B 29 1029 1029 HOH HOH . J 3 HOH B 30 1030 1030 HOH HOH . J 3 HOH B 31 1031 1031 HOH HOH . J 3 HOH B 32 1032 1032 HOH HOH . J 3 HOH B 33 1033 1033 HOH HOH . J 3 HOH B 34 1034 1034 HOH HOH . J 3 HOH B 35 1035 1035 HOH HOH . J 3 HOH B 36 1036 1036 HOH HOH . J 3 HOH B 37 1037 1037 HOH HOH . J 3 HOH B 38 1038 1038 HOH HOH . J 3 HOH B 39 1039 1039 HOH HOH . J 3 HOH B 40 1040 1040 HOH HOH . J 3 HOH B 41 1041 1041 HOH HOH . J 3 HOH B 42 1042 1042 HOH HOH . J 3 HOH B 43 1043 1043 HOH HOH . J 3 HOH B 44 1044 1044 HOH HOH . J 3 HOH B 45 1045 1045 HOH HOH . J 3 HOH B 46 1046 1046 HOH HOH . J 3 HOH B 47 1047 1047 HOH HOH . J 3 HOH B 48 1048 1048 HOH HOH . J 3 HOH B 49 1049 1049 HOH HOH . J 3 HOH B 50 1050 1050 HOH HOH . J 3 HOH B 51 1051 1051 HOH HOH . J 3 HOH B 52 1052 1052 HOH HOH . J 3 HOH B 53 1053 1053 HOH HOH . J 3 HOH B 54 1054 1054 HOH HOH . J 3 HOH B 55 1055 1055 HOH HOH . J 3 HOH B 56 1056 1056 HOH HOH . J 3 HOH B 57 1057 1057 HOH HOH . J 3 HOH B 58 1058 1058 HOH HOH . J 3 HOH B 59 1059 1059 HOH HOH . J 3 HOH B 60 1060 1060 HOH HOH . J 3 HOH B 61 1061 1061 HOH HOH . J 3 HOH B 62 1062 1062 HOH HOH . J 3 HOH B 63 1063 1063 HOH HOH . J 3 HOH B 64 1064 1064 HOH HOH . J 3 HOH B 65 1065 1065 HOH HOH . J 3 HOH B 66 1066 1066 HOH HOH . J 3 HOH B 67 1067 1067 HOH HOH . J 3 HOH B 68 1068 1068 HOH HOH . J 3 HOH B 69 1069 1069 HOH HOH . J 3 HOH B 70 1070 1070 HOH HOH . J 3 HOH B 71 1071 1071 HOH HOH . J 3 HOH B 72 1072 1072 HOH HOH . J 3 HOH B 73 1073 1073 HOH HOH . J 3 HOH B 74 1074 1074 HOH HOH . J 3 HOH B 75 1075 1075 HOH HOH . J 3 HOH B 76 1076 1076 HOH HOH . J 3 HOH B 77 1077 1077 HOH HOH . J 3 HOH B 78 1078 1078 HOH HOH . J 3 HOH B 79 1079 1079 HOH HOH . J 3 HOH B 80 1080 1080 HOH HOH . J 3 HOH B 81 1081 1081 HOH HOH . J 3 HOH B 82 1082 1082 HOH HOH . J 3 HOH B 83 1083 1083 HOH HOH . J 3 HOH B 84 1084 1084 HOH HOH . J 3 HOH B 85 1085 1085 HOH HOH . J 3 HOH B 86 1086 1086 HOH HOH . J 3 HOH B 87 1087 1087 HOH HOH . J 3 HOH B 88 1088 1088 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id H _atom_site.label_entity_id 2 _atom_site.Cartn_x 0.004 _atom_site.Cartn_y 53.518 _atom_site.Cartn_z 107.262 _atom_site.occupancy 0.33 _atom_site.B_iso_or_equiv 35.01 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 903 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 373 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 1 #