data_1HNC # _model_server_result.job_id cHxMgoUKH_nXelPUFb-vOQ _model_server_result.datetime_utc '2024-10-13 08:20:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1hnc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":218}' # _entry.id 1HNC # _exptl.entry_id 1HNC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 473.415 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'GLUTATHIONE S-(2,4 DINITROBENZENE)' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1HNC _cell.length_a 56.936 _cell.length_b 79.67 _cell.length_c 220.071 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1HNC _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F 1 1 C,D,G,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # _chem_comp.formula 'C16 H19 N5 O10 S' _chem_comp.formula_weight 473.415 _chem_comp.id GDN _chem_comp.mon_nstd_flag . _chem_comp.name 'GLUTATHIONE S-(2,4 DINITROBENZENE)' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 CA1 GDN sing 83 n n N1 HN1 GDN sing 84 n n N1 HN2A GDN sing 85 n n CA1 C1 GDN sing 86 n n CA1 CB1 GDN sing 87 n n CA1 HA1 GDN sing 88 n n C1 O11 GDN doub 89 n n C1 O12 GDN sing 90 n n O12 H12 GDN sing 91 n n CB1 CG1 GDN sing 92 n n CB1 HB11 GDN sing 93 n n CB1 HB12 GDN sing 94 n n CG1 CD1 GDN sing 95 n n CG1 HG11 GDN sing 96 n n CG1 HG12 GDN sing 97 n n CD1 OE1 GDN doub 98 n n CD1 N2 GDN sing 99 n n N2 CA2 GDN sing 100 n n N2 HN2 GDN sing 101 n n CA2 C2 GDN sing 102 n n CA2 CB2 GDN sing 103 n n CA2 HA2 GDN sing 104 n n C2 O2 GDN doub 105 n n C2 N3 GDN sing 106 n n CB2 SG2 GDN sing 107 n n CB2 HB21 GDN sing 108 n n CB2 HB22 GDN sing 109 n n SG2 C1' GDN sing 110 n n N3 CA3 GDN sing 111 n n N3 HN3 GDN sing 112 n n CA3 C3 GDN sing 113 n n CA3 HA31 GDN sing 114 n n CA3 HA32 GDN sing 115 n n C3 O31 GDN doub 116 n n C3 O32 GDN sing 117 n n O32 H32 GDN sing 118 n n C1' C2' GDN doub 119 n y C1' C6' GDN sing 120 n y C2' C3' GDN sing 121 n y C2' N2' GDN sing 122 n n C3' C4' GDN doub 123 n y C3' H3' GDN sing 124 n n C4' C5' GDN sing 125 n y C4' N4' GDN sing 126 n n C5' C6' GDN doub 127 n y C5' H5' GDN sing 128 n n C6' H6' GDN sing 129 n n N2' O2A GDN sing 130 n n N2' O2B GDN doub 131 n n N4' O4A GDN sing 132 n n N4' O4B GDN doub 133 n n # _atom_sites.entry_id 1HNC _atom_sites.fract_transf_matrix[1][1] 0.017564 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012552 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004544 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 GDN A 1 218 218 GDN GDN . F 2 GDN B 1 218 218 GDN GDN . G 2 GDN C 1 218 218 GDN GDN . H 2 GDN D 1 218 218 GDN GDN . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 GDN . . . E 2 14.328 46.134 43.927 1 7.2 ? N1 GDN 218 A 1 HETATM 2 C CA1 GDN . . . E 2 13.99 47.364 44.633 1 7.05 ? CA1 GDN 218 A 1 HETATM 3 C C1 GDN . . . E 2 12.562 47.298 45.179 1 14.53 ? C1 GDN 218 A 1 HETATM 4 O O11 GDN . . . E 2 11.94 46.219 45.091 1 15.77 ? O11 GDN 218 A 1 HETATM 5 O O12 GDN . . . E 2 12.073 48.303 45.733 1 25.02 ? O12 GDN 218 A 1 HETATM 6 C CB1 GDN . . . E 2 14.176 48.568 43.703 1 6 ? CB1 GDN 218 A 1 HETATM 7 C CG1 GDN . . . E 2 14.278 49.915 44.406 1 6 ? CG1 GDN 218 A 1 HETATM 8 C CD1 GDN . . . E 2 14.759 51.029 43.487 1 14.69 ? CD1 GDN 218 A 1 HETATM 9 O OE1 GDN . . . E 2 15.366 50.764 42.448 1 20.56 ? OE1 GDN 218 A 1 HETATM 10 N N2 GDN . . . E 2 14.384 52.266 43.805 1 20.18 ? N2 GDN 218 A 1 HETATM 11 C CA2 GDN . . . E 2 14.779 53.437 43.023 1 22.99 ? CA2 GDN 218 A 1 HETATM 12 C C2 GDN . . . E 2 15.437 54.473 43.926 1 20.47 ? C2 GDN 218 A 1 HETATM 13 O O2 GDN . . . E 2 14.812 55.463 44.299 1 25.89 ? O2 GDN 218 A 1 HETATM 14 C CB2 GDN . . . E 2 13.56 54.068 42.347 1 20.77 ? CB2 GDN 218 A 1 HETATM 15 S SG2 GDN . . . E 2 12.821 53.071 41.02 1 33.8 ? SG2 GDN 218 A 1 HETATM 16 N N3 GDN . . . E 2 16.745 54.358 44.091 1 16.13 ? N3 GDN 218 A 1 HETATM 17 C CA3 GDN . . . E 2 17.543 55.252 44.915 1 21.16 ? CA3 GDN 218 A 1 HETATM 18 C C3 GDN . . . E 2 18.783 54.486 45.316 1 27.95 ? C3 GDN 218 A 1 HETATM 19 O O31 GDN . . . E 2 19.046 53.415 44.723 1 29.24 ? O31 GDN 218 A 1 HETATM 20 O O32 GDN . . . E 2 19.494 54.948 46.233 1 35.05 ? O32 GDN 218 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 47 _model_server_stats.query_time_ms 542 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 20 #