data_1HNN
#
_model_server_result.job_id            BMplgAGVihhZwH2pTzGmXA 
_model_server_result.datetime_utc      '2024-11-23 03:13:51' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1hnn 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":2002}' 
#
_entry.id    1HNN 
#
_exptl.entry_id    1HNN 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              384.411 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            S-ADENOSYL-L-HOMOCYSTEINE 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1HNN 
_cell.length_a            94.35 
_cell.length_b            94.35 
_cell.length_c            187.7 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1HNN 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,G 1 1 
B,E,F,H 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 E N N 
#
_chem_comp.formula           'C14 H20 N6 O5 S' 
_chem_comp.formula_weight    384.411 
_chem_comp.id                SAH 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              S-ADENOSYL-L-HOMOCYSTEINE 
_chem_comp.type              'l-peptide linking' 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N CA SAH sing 277 n n 
N HN1 SAH sing 278 n n 
N HN2 SAH sing 279 n n 
CA CB SAH sing 280 n n 
CA C SAH sing 281 n n 
CA HA SAH sing 282 n n 
CB CG SAH sing 283 n n 
CB HB1 SAH sing 284 n n 
CB HB2 SAH sing 285 n n 
CG SD SAH sing 286 n n 
CG HG1 SAH sing 287 n n 
CG HG2 SAH sing 288 n n 
SD C5' SAH sing 289 n n 
C O SAH doub 290 n n 
C OXT SAH sing 291 n n 
OXT HXT SAH sing 292 n n 
C5' C4' SAH sing 293 n n 
C5' "H5'1" SAH sing 294 n n 
C5' "H5'2" SAH sing 295 n n 
C4' O4' SAH sing 296 n n 
C4' C3' SAH sing 297 n n 
C4' H4' SAH sing 298 n n 
O4' C1' SAH sing 299 n n 
C3' O3' SAH sing 300 n n 
C3' C2' SAH sing 301 n n 
C3' H3' SAH sing 302 n n 
O3' HO3' SAH sing 303 n n 
C2' O2' SAH sing 304 n n 
C2' C1' SAH sing 305 n n 
C2' H2' SAH sing 306 n n 
O2' HO2' SAH sing 307 n n 
C1' N9 SAH sing 308 n n 
C1' H1' SAH sing 309 n n 
N9 C8 SAH sing 310 n y 
N9 C4 SAH sing 311 n y 
C8 N7 SAH doub 312 n y 
C8 H8 SAH sing 313 n n 
N7 C5 SAH sing 314 n y 
C5 C6 SAH sing 315 n y 
C5 C4 SAH doub 316 n y 
C6 N6 SAH sing 317 n n 
C6 N1 SAH doub 318 n y 
N6 HN61 SAH sing 319 n n 
N6 HN62 SAH sing 320 n n 
N1 C2 SAH sing 321 n y 
C2 N3 SAH doub 322 n y 
C2 H2 SAH sing 323 n n 
N3 C4 SAH sing 324 n y 
#
_atom_sites.entry_id                     1HNN 
_atom_sites.fract_transf_matrix[1][1]    0.010599 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010599 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005328 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 SAH A 1 2001 2001 SAH SAH . 
D 3 SKF A 1 3001 3001 SKF SKF . 
E 2 SAH B 1 2002 2002 SAH SAH . 
F 3 SKF B 1 3002 3002 SKF SKF . 
G 4 HOH A 1 1002 1002 HOH WAT . 
G 4 HOH A 2 1003 1003 HOH WAT . 
G 4 HOH A 3 1006 1006 HOH WAT . 
G 4 HOH A 4 1009 1009 HOH WAT . 
G 4 HOH A 5 1011 1011 HOH WAT . 
G 4 HOH A 6 1016 1016 HOH WAT . 
G 4 HOH A 7 1017 1017 HOH WAT . 
G 4 HOH A 8 1018 1018 HOH WAT . 
G 4 HOH A 9 1021 1021 HOH WAT . 
G 4 HOH A 10 1022 1022 HOH WAT . 
G 4 HOH A 11 1024 1024 HOH WAT . 
G 4 HOH A 12 1026 1026 HOH WAT . 
G 4 HOH A 13 1027 1027 HOH WAT . 
G 4 HOH A 14 1028 1028 HOH WAT . 
G 4 HOH A 15 1029 1029 HOH WAT . 
G 4 HOH A 16 1030 1030 HOH WAT . 
G 4 HOH A 17 1038 1038 HOH WAT . 
G 4 HOH A 18 1040 1040 HOH WAT . 
G 4 HOH A 19 1041 1041 HOH WAT . 
G 4 HOH A 20 1044 1044 HOH WAT . 
G 4 HOH A 21 1045 1045 HOH WAT . 
G 4 HOH A 22 1046 1046 HOH WAT . 
G 4 HOH A 23 1047 1047 HOH WAT . 
G 4 HOH A 24 1050 1050 HOH WAT . 
G 4 HOH A 25 1051 1051 HOH WAT . 
G 4 HOH A 26 1052 1052 HOH WAT . 
G 4 HOH A 27 1053 1053 HOH WAT . 
G 4 HOH A 28 1055 1055 HOH WAT . 
G 4 HOH A 29 1056 1056 HOH WAT . 
G 4 HOH A 30 1057 1057 HOH WAT . 
G 4 HOH A 31 1059 1059 HOH WAT . 
G 4 HOH A 32 1062 1062 HOH WAT . 
G 4 HOH A 33 1063 1063 HOH WAT . 
G 4 HOH A 34 1064 1064 HOH WAT . 
G 4 HOH A 35 1066 1066 HOH WAT . 
G 4 HOH A 36 1067 1067 HOH WAT . 
G 4 HOH A 37 1068 1068 HOH WAT . 
G 4 HOH A 38 1069 1069 HOH WAT . 
G 4 HOH A 39 1070 1070 HOH WAT . 
G 4 HOH A 40 1071 1071 HOH WAT . 
G 4 HOH A 41 1072 1072 HOH WAT . 
G 4 HOH A 42 1074 1074 HOH WAT . 
G 4 HOH A 43 1075 1075 HOH WAT . 
G 4 HOH A 44 1076 1076 HOH WAT . 
G 4 HOH A 45 1077 1077 HOH WAT . 
G 4 HOH A 46 1084 1084 HOH WAT . 
G 4 HOH A 47 1086 1086 HOH WAT . 
G 4 HOH A 48 1089 1089 HOH WAT . 
G 4 HOH A 49 1091 1091 HOH WAT . 
G 4 HOH A 50 1093 1093 HOH WAT . 
G 4 HOH A 51 1095 1095 HOH WAT . 
G 4 HOH A 52 1098 1098 HOH WAT . 
G 4 HOH A 53 1099 1099 HOH WAT . 
G 4 HOH A 54 1102 1102 HOH WAT . 
G 4 HOH A 55 1103 1103 HOH WAT . 
G 4 HOH A 56 1108 1108 HOH WAT . 
G 4 HOH A 57 1111 1111 HOH WAT . 
G 4 HOH A 58 1112 1112 HOH WAT . 
G 4 HOH A 59 1113 1113 HOH WAT . 
G 4 HOH A 60 1114 1114 HOH WAT . 
G 4 HOH A 61 1116 1116 HOH WAT . 
G 4 HOH A 62 1118 1118 HOH WAT . 
G 4 HOH A 63 1119 1119 HOH WAT . 
G 4 HOH A 64 1120 1120 HOH WAT . 
G 4 HOH A 65 1123 1123 HOH WAT . 
G 4 HOH A 66 1124 1124 HOH WAT . 
H 4 HOH B 1 1001 1001 HOH WAT . 
H 4 HOH B 2 1004 1004 HOH WAT . 
H 4 HOH B 3 1005 1005 HOH WAT . 
H 4 HOH B 4 1007 1007 HOH WAT . 
H 4 HOH B 5 1008 1008 HOH WAT . 
H 4 HOH B 6 1010 1010 HOH WAT . 
H 4 HOH B 7 1012 1012 HOH WAT . 
H 4 HOH B 8 1013 1013 HOH WAT . 
H 4 HOH B 9 1014 1014 HOH WAT . 
H 4 HOH B 10 1015 1015 HOH WAT . 
H 4 HOH B 11 1019 1019 HOH WAT . 
H 4 HOH B 12 1020 1020 HOH WAT . 
H 4 HOH B 13 1023 1023 HOH WAT . 
H 4 HOH B 14 1025 1025 HOH WAT . 
H 4 HOH B 15 1031 1031 HOH WAT . 
H 4 HOH B 16 1032 1032 HOH WAT . 
H 4 HOH B 17 1033 1033 HOH WAT . 
H 4 HOH B 18 1034 1034 HOH WAT . 
H 4 HOH B 19 1035 1035 HOH WAT . 
H 4 HOH B 20 1036 1036 HOH WAT . 
H 4 HOH B 21 1037 1037 HOH WAT . 
H 4 HOH B 22 1039 1039 HOH WAT . 
H 4 HOH B 23 1042 1042 HOH WAT . 
H 4 HOH B 24 1043 1043 HOH WAT . 
H 4 HOH B 25 1048 1048 HOH WAT . 
H 4 HOH B 26 1049 1049 HOH WAT . 
H 4 HOH B 27 1054 1054 HOH WAT . 
H 4 HOH B 28 1058 1058 HOH WAT . 
H 4 HOH B 29 1060 1060 HOH WAT . 
H 4 HOH B 30 1061 1061 HOH WAT . 
H 4 HOH B 31 1065 1065 HOH WAT . 
H 4 HOH B 32 1073 1073 HOH WAT . 
H 4 HOH B 33 1078 1078 HOH WAT . 
H 4 HOH B 34 1079 1079 HOH WAT . 
H 4 HOH B 35 1080 1080 HOH WAT . 
H 4 HOH B 36 1081 1081 HOH WAT . 
H 4 HOH B 37 1082 1082 HOH WAT . 
H 4 HOH B 38 1083 1083 HOH WAT . 
H 4 HOH B 39 1085 1085 HOH WAT . 
H 4 HOH B 40 1087 1087 HOH WAT . 
H 4 HOH B 41 1088 1088 HOH WAT . 
H 4 HOH B 42 1090 1090 HOH WAT . 
H 4 HOH B 43 1092 1092 HOH WAT . 
H 4 HOH B 44 1094 1094 HOH WAT . 
H 4 HOH B 45 1096 1096 HOH WAT . 
H 4 HOH B 46 1097 1097 HOH WAT . 
H 4 HOH B 47 1100 1100 HOH WAT . 
H 4 HOH B 48 1101 1101 HOH WAT . 
H 4 HOH B 49 1104 1104 HOH WAT . 
H 4 HOH B 50 1105 1105 HOH WAT . 
H 4 HOH B 51 1106 1106 HOH WAT . 
H 4 HOH B 52 1107 1107 HOH WAT . 
H 4 HOH B 53 1109 1109 HOH WAT . 
H 4 HOH B 54 1110 1110 HOH WAT . 
H 4 HOH B 55 1115 1115 HOH WAT . 
H 4 HOH B 56 1117 1117 HOH WAT . 
H 4 HOH B 57 1121 1121 HOH WAT . 
H 4 HOH B 58 1122 1122 HOH WAT . 
H 4 HOH B 59 1125 1125 HOH WAT . 
H 4 HOH B 60 1126 1126 HOH WAT . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N SAH . . . E 2 3.953 18.969 19.362 1 35.66 ? N SAH 2002 B 1 
HETATM 2 C CA SAH . . . E 2 5.23 18.422 19.837 1 36.96 ? CA SAH 2002 B 1 
HETATM 3 C CB SAH . . . E 2 6.312 18.56 18.755 1 41.76 ? CB SAH 2002 B 1 
HETATM 4 C CG SAH . . . E 2 6.112 17.965 17.392 1 41.97 ? CG SAH 2002 B 1 
HETATM 5 S SD SAH . . . E 2 7.382 16.838 16.842 1 42.1 ? SD SAH 2002 B 1 
HETATM 6 C C SAH . . . E 2 5.822 19.211 20.99 1 35.95 ? C SAH 2002 B 1 
HETATM 7 O O SAH . . . E 2 5.276 20.307 21.264 1 33.48 ? O SAH 2002 B 1 
HETATM 8 O OXT SAH . . . E 2 6.903 18.821 21.503 1 36.32 ? OXT SAH 2002 B 1 
HETATM 9 C C5' SAH . . . E 2 6.686 16.632 15.202 1 42.3 ? C5' SAH 2002 B 1 
HETATM 10 C C4' SAH . . . E 2 5.361 15.993 15.112 1 41.85 ? C4' SAH 2002 B 1 
HETATM 11 O O4' SAH . . . E 2 5.094 16.019 13.703 1 42.63 ? O4' SAH 2002 B 1 
HETATM 12 C C3' SAH . . . E 2 5.298 14.448 15.545 1 42.49 ? C3' SAH 2002 B 1 
HETATM 13 O O3' SAH . . . E 2 4.354 14.103 16.617 1 43.19 ? O3' SAH 2002 B 1 
HETATM 14 C C2' SAH . . . E 2 4.968 13.826 14.177 1 42.05 ? C2' SAH 2002 B 1 
HETATM 15 O O2' SAH . . . E 2 4.299 12.561 14.174 1 42.62 ? O2' SAH 2002 B 1 
HETATM 16 C C1' SAH . . . E 2 4.212 14.962 13.529 1 42.9 ? C1' SAH 2002 B 1 
HETATM 17 N N9 SAH . . . E 2 3.984 14.905 12.09 1 45.19 ? N9 SAH 2002 B 1 
HETATM 18 C C8 SAH . . . E 2 4.723 14.188 11.117 1 44.2 ? C8 SAH 2002 B 1 
HETATM 19 N N7 SAH . . . E 2 4.233 14.375 9.935 1 45.45 ? N7 SAH 2002 B 1 
HETATM 20 C C5 SAH . . . E 2 3.135 15.233 10.092 1 46.32 ? C5 SAH 2002 B 1 
HETATM 21 C C6 SAH . . . E 2 2.196 15.811 9.188 1 46.88 ? C6 SAH 2002 B 1 
HETATM 22 N N6 SAH . . . E 2 2.24 15.566 7.876 1 47.19 ? N6 SAH 2002 B 1 
HETATM 23 N N1 SAH . . . E 2 1.207 16.639 9.658 1 47.25 ? N1 SAH 2002 B 1 
HETATM 24 C C2 SAH . . . E 2 1.177 16.875 10.977 1 46.08 ? C2 SAH 2002 B 1 
HETATM 25 N N3 SAH . . . E 2 1.995 16.399 11.92 1 45.61 ? N3 SAH 2002 B 1 
HETATM 26 C C4 SAH . . . E 2 2.967 15.579 11.415 1 46.04 ? C4 SAH 2002 B 1 
#
_model_server_stats.io_time_ms              32 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           313 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           26 
#