data_1HO3
#
_model_server_result.job_id            7xMRCZGdjT4VQ1G_dwxZkA 
_model_server_result.datetime_utc      '2024-10-21 04:53:56' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1ho3 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":400}' 
#
_entry.id    1HO3 
#
_exptl.entry_id    1HO3 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              133.103 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ASPARTIC ACID' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            1HO3 
_cell.length_a            80.999 
_cell.length_b            80.999 
_cell.length_c            341.075 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1HO3 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        179 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 65 2 2' 
#
_pdbx_struct_assembly.method_details        PISA,PQS 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 10_665 -y+1,-x+1,-z+1/6 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 40.4995 70.147192 56.845833 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 77 A CYS 77 1_555 A SG CYS 105 A CYS 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? 
disulf ? disulf2 B SG CYS 77 B CYS 77 1_555 B SG CYS 105 B CYS 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? 
#
_chem_comp.formula           'C4 H7 N O4' 
_chem_comp.formula_weight    133.103 
_chem_comp.id                ASP 
_chem_comp.mon_nstd_flag     y 
_chem_comp.name              'ASPARTIC ACID' 
_chem_comp.type              'l-peptide linking' 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N CA ASP sing 55 n n 
N H ASP sing 56 n n 
N H2 ASP sing 57 n n 
CA C ASP sing 58 n n 
CA CB ASP sing 59 n n 
CA HA ASP sing 60 n n 
C O ASP doub 61 n n 
C OXT ASP sing 62 n n 
CB CG ASP sing 63 n n 
CB HB2 ASP sing 64 n n 
CB HB3 ASP sing 65 n n 
CG OD1 ASP doub 66 n n 
CG OD2 ASP sing 67 n n 
OD2 HD2 ASP sing 68 n n 
OXT HXT ASP sing 69 n n 
#
_atom_sites.entry_id                     1HO3 
_atom_sites.fract_transf_matrix[1][1]    0.012346 
_atom_sites.fract_transf_matrix[1][2]    0.007128 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014256 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.002932 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 ASP A 1 399 399 ASP ASP . 
D 2 ASP B 1 400 400 ASP ASP . 
E 3 HOH A 1 402 402 HOH HOH . 
E 3 HOH A 2 403 403 HOH HOH . 
E 3 HOH A 3 405 405 HOH HOH . 
E 3 HOH A 4 407 407 HOH HOH . 
E 3 HOH A 5 411 411 HOH HOH . 
E 3 HOH A 6 412 412 HOH HOH . 
E 3 HOH A 7 413 413 HOH HOH . 
E 3 HOH A 8 414 414 HOH HOH . 
E 3 HOH A 9 416 416 HOH HOH . 
E 3 HOH A 10 417 417 HOH HOH . 
E 3 HOH A 11 418 418 HOH HOH . 
E 3 HOH A 12 421 421 HOH HOH . 
E 3 HOH A 13 425 425 HOH HOH . 
E 3 HOH A 14 426 426 HOH HOH . 
E 3 HOH A 15 427 427 HOH HOH . 
E 3 HOH A 16 429 429 HOH HOH . 
E 3 HOH A 17 431 431 HOH HOH . 
E 3 HOH A 18 439 439 HOH HOH . 
E 3 HOH A 19 441 441 HOH HOH . 
E 3 HOH A 20 442 442 HOH HOH . 
E 3 HOH A 21 443 443 HOH HOH . 
E 3 HOH A 22 448 448 HOH HOH . 
E 3 HOH A 23 449 449 HOH HOH . 
E 3 HOH A 24 456 456 HOH HOH . 
E 3 HOH A 25 458 458 HOH HOH . 
E 3 HOH A 26 459 459 HOH HOH . 
E 3 HOH A 27 461 461 HOH HOH . 
E 3 HOH A 28 463 463 HOH HOH . 
E 3 HOH A 29 467 467 HOH HOH . 
E 3 HOH A 30 469 469 HOH HOH . 
E 3 HOH A 31 470 470 HOH HOH . 
E 3 HOH A 32 471 471 HOH HOH . 
E 3 HOH A 33 472 472 HOH HOH . 
E 3 HOH A 34 473 473 HOH HOH . 
E 3 HOH A 35 474 474 HOH HOH . 
E 3 HOH A 36 477 477 HOH HOH . 
E 3 HOH A 37 478 478 HOH HOH . 
E 3 HOH A 38 479 479 HOH HOH . 
E 3 HOH A 39 482 482 HOH HOH . 
E 3 HOH A 40 484 484 HOH HOH . 
E 3 HOH A 41 486 486 HOH HOH . 
E 3 HOH A 42 489 489 HOH HOH . 
E 3 HOH A 43 490 490 HOH HOH . 
E 3 HOH A 44 493 493 HOH HOH . 
E 3 HOH A 45 494 494 HOH HOH . 
E 3 HOH A 46 495 495 HOH HOH . 
E 3 HOH A 47 496 496 HOH HOH . 
E 3 HOH A 48 498 498 HOH HOH . 
E 3 HOH A 49 499 499 HOH HOH . 
E 3 HOH A 50 503 503 HOH HOH . 
E 3 HOH A 51 504 504 HOH HOH . 
E 3 HOH A 52 505 505 HOH HOH . 
E 3 HOH A 53 507 507 HOH HOH . 
E 3 HOH A 54 509 509 HOH HOH . 
F 3 HOH B 1 401 401 HOH HOH . 
F 3 HOH B 2 404 404 HOH HOH . 
F 3 HOH B 3 406 406 HOH HOH . 
F 3 HOH B 4 408 408 HOH HOH . 
F 3 HOH B 5 409 409 HOH HOH . 
F 3 HOH B 6 410 410 HOH HOH . 
F 3 HOH B 7 415 415 HOH HOH . 
F 3 HOH B 8 419 419 HOH HOH . 
F 3 HOH B 9 420 420 HOH HOH . 
F 3 HOH B 10 422 422 HOH HOH . 
F 3 HOH B 11 423 423 HOH HOH . 
F 3 HOH B 12 424 424 HOH HOH . 
F 3 HOH B 13 428 428 HOH HOH . 
F 3 HOH B 14 430 430 HOH HOH . 
F 3 HOH B 15 432 432 HOH HOH . 
F 3 HOH B 16 433 433 HOH HOH . 
F 3 HOH B 17 434 434 HOH HOH . 
F 3 HOH B 18 435 435 HOH HOH . 
F 3 HOH B 19 436 436 HOH HOH . 
F 3 HOH B 20 437 437 HOH HOH . 
F 3 HOH B 21 438 438 HOH HOH . 
F 3 HOH B 22 440 440 HOH HOH . 
F 3 HOH B 23 444 444 HOH HOH . 
F 3 HOH B 24 445 445 HOH HOH . 
F 3 HOH B 25 446 446 HOH HOH . 
F 3 HOH B 26 447 447 HOH HOH . 
F 3 HOH B 27 450 450 HOH HOH . 
F 3 HOH B 28 451 451 HOH HOH . 
F 3 HOH B 29 452 452 HOH HOH . 
F 3 HOH B 30 453 453 HOH HOH . 
F 3 HOH B 31 454 454 HOH HOH . 
F 3 HOH B 32 455 455 HOH HOH . 
F 3 HOH B 33 457 457 HOH HOH . 
F 3 HOH B 34 460 460 HOH HOH . 
F 3 HOH B 35 462 462 HOH HOH . 
F 3 HOH B 36 464 464 HOH HOH . 
F 3 HOH B 37 465 465 HOH HOH . 
F 3 HOH B 38 466 466 HOH HOH . 
F 3 HOH B 39 468 468 HOH HOH . 
F 3 HOH B 40 475 475 HOH HOH . 
F 3 HOH B 41 476 476 HOH HOH . 
F 3 HOH B 42 480 480 HOH HOH . 
F 3 HOH B 43 481 481 HOH HOH . 
F 3 HOH B 44 483 483 HOH HOH . 
F 3 HOH B 45 485 485 HOH HOH . 
F 3 HOH B 46 487 487 HOH HOH . 
F 3 HOH B 47 488 488 HOH HOH . 
F 3 HOH B 48 491 491 HOH HOH . 
F 3 HOH B 49 492 492 HOH HOH . 
F 3 HOH B 50 497 497 HOH HOH . 
F 3 HOH B 51 500 500 HOH HOH . 
F 3 HOH B 52 501 501 HOH HOH . 
F 3 HOH B 53 502 502 HOH HOH . 
F 3 HOH B 54 506 506 HOH HOH . 
F 3 HOH B 55 508 508 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N ASP . . . D 2 10.7 56.791 39.906 1 50.77 ? N ASP 400 B 1 
HETATM 2 C CA ASP . . . D 2 9.544 56.966 40.764 1 44.91 ? CA ASP 400 B 1 
HETATM 3 C C ASP . . . D 2 9.28 55.682 41.516 1 47.27 ? C ASP 400 B 1 
HETATM 4 O O ASP . . . D 2 9.322 55.718 42.763 1 47.18 ? O ASP 400 B 1 
HETATM 5 C CB ASP . . . D 2 8.309 57.306 39.942 1 47.93 ? CB ASP 400 B 1 
HETATM 6 C CG ASP . . . D 2 7.156 57.802 40.798 1 50.8 ? CG ASP 400 B 1 
HETATM 7 O OD1 ASP . . . D 2 6.999 57.303 41.937 1 47.63 ? OD1 ASP 400 B 1 
HETATM 8 O OD2 ASP . . . D 2 6.402 58.679 40.31 1 44.51 ? OD2 ASP 400 B 1 
HETATM 9 O OXT ASP . . . D 2 9.037 54.648 40.858 1 47.18 ? OXT ASP 400 B 1 
#
_model_server_stats.io_time_ms              65 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           350 
_model_server_stats.encode_time_ms          27 
_model_server_stats.element_count           9 
#