data_1HOT # _model_server_result.job_id 67LHO3gkoXrSZfZenJQxDQ _model_server_result.datetime_utc '2024-10-11 18:24:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1hot # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":269}' # _entry.id 1HOT # _exptl.entry_id 1HOT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 301.188 _entity.id 2 _entity.src_method man _entity.type non-polymer _entity.pdbx_description 2-acetamido-2-deoxy-6-O-phosphono-alpha-D-glucopyranose _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1HOT _cell.length_a 125.71 _cell.length_b 125.71 _cell.length_c 222.87 _cell.Z_PDB 36 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1HOT _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # _chem_comp.formula 'C8 H16 N O9 P' _chem_comp.formula_weight 301.188 _chem_comp.id 16G _chem_comp.mon_nstd_flag n _chem_comp.name 2-acetamido-2-deoxy-6-O-phosphono-alpha-D-glucopyranose _chem_comp.type 'd-saccharide, alpha linking' _chem_comp.pdbx_synonyms N-ACETYL-D-GLUCOSAMINE-6-PHOSPHATE;N-acetyl-6-O-phosphono-alpha-D-glucosamine;2-acetamido-2-deoxy-6-O-phosphono-alpha-D-glucose;2-acetamido-2-deoxy-6-O-phosphono-D-glucose;2-acetamido-2-deoxy-6-O-phosphono-glucose # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 16G sing 1 n n C1 O1 16G sing 2 n n C1 O5 16G sing 3 n n C1 H1 16G sing 4 n n C2 C3 16G sing 5 n n C2 N2 16G sing 6 n n C2 H2 16G sing 7 n n C3 C4 16G sing 8 n n C3 O3 16G sing 9 n n C3 H3 16G sing 10 n n C4 C5 16G sing 11 n n C4 O4 16G sing 12 n n C4 H4 16G sing 13 n n C5 C6 16G sing 14 n n C5 O5 16G sing 15 n n C5 H5 16G sing 16 n n C6 O6 16G sing 17 n n C6 H61 16G sing 18 n n C6 H62 16G sing 19 n n C7 C8 16G sing 20 n n C7 N2 16G sing 21 n n C7 O7 16G doub 22 n n C8 H81 16G sing 23 n n C8 H82 16G sing 24 n n C8 H83 16G sing 25 n n N2 HN2 16G sing 26 n n O1 HO1 16G sing 27 n n O3 HO3 16G sing 28 n n O4 HO4 16G sing 29 n n O6 P 16G sing 30 n n P O1P 16G doub 31 n n P O2P 16G sing 32 n n P O3P 16G sing 33 n n O2P HOP2 16G sing 34 n n O3P HOP3 16G sing 35 n n # _pdbx_chem_comp_identifier.comp_id 16G _pdbx_chem_comp_identifier.identifier a-D-GlcpNAc6PO3 _pdbx_chem_comp_identifier.type 'IUPAC CARBOHYDRATE SYMBOL' _pdbx_chem_comp_identifier.program PDB-CARE _pdbx_chem_comp_identifier.program_version 1 # _atom_sites.entry_id 1HOT _atom_sites.fract_transf_matrix[1][1] 0.007955 _atom_sites.fract_transf_matrix[1][2] 0.004593 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009185 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004487 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 16G A 1 269 269 16G 16G . D 3 PO4 A 1 267 267 PO4 PO4 . E 2 16G B 1 271 271 16G 16G . F 3 PO4 B 1 268 268 PO4 PO4 . G 4 HOH A 1 271 271 HOH HOH . G 4 HOH A 2 272 272 HOH HOH . G 4 HOH A 3 273 273 HOH HOH . G 4 HOH A 4 274 274 HOH HOH . G 4 HOH A 5 275 275 HOH HOH . G 4 HOH A 6 276 276 HOH HOH . G 4 HOH A 7 277 277 HOH HOH . G 4 HOH A 8 278 278 HOH HOH . G 4 HOH A 9 279 279 HOH HOH . G 4 HOH A 10 280 280 HOH HOH . G 4 HOH A 11 281 281 HOH HOH . G 4 HOH A 12 282 282 HOH HOH . G 4 HOH A 13 283 283 HOH HOH . G 4 HOH A 14 284 284 HOH HOH . G 4 HOH A 15 285 285 HOH HOH . G 4 HOH A 16 286 286 HOH HOH . G 4 HOH A 17 287 287 HOH HOH . G 4 HOH A 18 288 288 HOH HOH . G 4 HOH A 19 289 289 HOH HOH . G 4 HOH A 20 290 290 HOH HOH . G 4 HOH A 21 291 291 HOH HOH . G 4 HOH A 22 292 292 HOH HOH . G 4 HOH A 23 293 293 HOH HOH . G 4 HOH A 24 294 294 HOH HOH . G 4 HOH A 25 295 295 HOH HOH . G 4 HOH A 26 296 296 HOH HOH . G 4 HOH A 27 297 297 HOH HOH . G 4 HOH A 28 298 298 HOH HOH . G 4 HOH A 29 299 299 HOH HOH . G 4 HOH A 30 300 300 HOH HOH . G 4 HOH A 31 301 301 HOH HOH . G 4 HOH A 32 302 302 HOH HOH . G 4 HOH A 33 303 303 HOH HOH . G 4 HOH A 34 304 304 HOH HOH . G 4 HOH A 35 305 305 HOH HOH . G 4 HOH A 36 306 306 HOH HOH . G 4 HOH A 37 307 307 HOH HOH . G 4 HOH A 38 308 308 HOH HOH . G 4 HOH A 39 309 309 HOH HOH . G 4 HOH A 40 310 310 HOH HOH . G 4 HOH A 41 311 311 HOH HOH . G 4 HOH A 42 312 312 HOH HOH . G 4 HOH A 43 313 313 HOH HOH . G 4 HOH A 44 314 314 HOH HOH . G 4 HOH A 45 315 315 HOH HOH . G 4 HOH A 46 316 316 HOH HOH . G 4 HOH A 47 317 317 HOH HOH . G 4 HOH A 48 318 318 HOH HOH . G 4 HOH A 49 319 319 HOH HOH . G 4 HOH A 50 320 320 HOH HOH . G 4 HOH A 51 321 321 HOH HOH . G 4 HOH A 52 322 322 HOH HOH . G 4 HOH A 53 323 323 HOH HOH . G 4 HOH A 54 324 324 HOH HOH . G 4 HOH A 55 325 325 HOH HOH . G 4 HOH A 56 326 326 HOH HOH . G 4 HOH A 57 327 327 HOH HOH . G 4 HOH A 58 328 328 HOH HOH . G 4 HOH A 59 329 329 HOH HOH . G 4 HOH A 60 330 330 HOH HOH . G 4 HOH A 61 331 331 HOH HOH . G 4 HOH A 62 332 332 HOH HOH . G 4 HOH A 63 333 333 HOH HOH . G 4 HOH A 64 334 334 HOH HOH . G 4 HOH A 65 335 335 HOH HOH . G 4 HOH A 66 336 336 HOH HOH . G 4 HOH A 67 337 337 HOH HOH . G 4 HOH A 68 338 338 HOH HOH . G 4 HOH A 69 339 339 HOH HOH . G 4 HOH A 70 340 340 HOH HOH . G 4 HOH A 71 341 341 HOH HOH . G 4 HOH A 72 342 342 HOH HOH . G 4 HOH A 73 343 343 HOH HOH . G 4 HOH A 74 344 344 HOH HOH . G 4 HOH A 75 345 345 HOH HOH . G 4 HOH A 76 346 346 HOH HOH . G 4 HOH A 77 347 347 HOH HOH . G 4 HOH A 78 348 348 HOH HOH . G 4 HOH A 79 349 349 HOH HOH . G 4 HOH A 80 350 350 HOH HOH . G 4 HOH A 81 351 351 HOH HOH . G 4 HOH A 82 352 352 HOH HOH . G 4 HOH A 83 353 353 HOH HOH . G 4 HOH A 84 354 354 HOH HOH . G 4 HOH A 85 355 355 HOH HOH . G 4 HOH A 86 356 356 HOH HOH . G 4 HOH A 87 357 357 HOH HOH . G 4 HOH A 88 358 358 HOH HOH . G 4 HOH A 89 359 359 HOH HOH . G 4 HOH A 90 360 360 HOH HOH . G 4 HOH A 91 361 361 HOH HOH . G 4 HOH A 92 362 362 HOH HOH . G 4 HOH A 93 363 363 HOH HOH . G 4 HOH A 94 364 364 HOH HOH . G 4 HOH A 95 365 365 HOH HOH . G 4 HOH A 96 366 366 HOH HOH . H 4 HOH B 1 273 273 HOH HOH . H 4 HOH B 2 274 274 HOH HOH . H 4 HOH B 3 275 275 HOH HOH . H 4 HOH B 4 276 276 HOH HOH . H 4 HOH B 5 277 277 HOH HOH . H 4 HOH B 6 278 278 HOH HOH . H 4 HOH B 7 279 279 HOH HOH . H 4 HOH B 8 280 280 HOH HOH . H 4 HOH B 9 281 281 HOH HOH . H 4 HOH B 10 282 282 HOH HOH . H 4 HOH B 11 283 283 HOH HOH . H 4 HOH B 12 284 284 HOH HOH . H 4 HOH B 13 285 285 HOH HOH . H 4 HOH B 14 286 286 HOH HOH . H 4 HOH B 15 287 287 HOH HOH . H 4 HOH B 16 288 288 HOH HOH . H 4 HOH B 17 289 289 HOH HOH . H 4 HOH B 18 290 290 HOH HOH . H 4 HOH B 19 291 291 HOH HOH . H 4 HOH B 20 292 292 HOH HOH . H 4 HOH B 21 293 293 HOH HOH . H 4 HOH B 22 294 294 HOH HOH . H 4 HOH B 23 295 295 HOH HOH . H 4 HOH B 24 296 296 HOH HOH . H 4 HOH B 25 297 297 HOH HOH . H 4 HOH B 26 298 298 HOH HOH . H 4 HOH B 27 299 299 HOH HOH . H 4 HOH B 28 300 300 HOH HOH . H 4 HOH B 29 301 301 HOH HOH . H 4 HOH B 30 302 302 HOH HOH . H 4 HOH B 31 303 303 HOH HOH . H 4 HOH B 32 304 304 HOH HOH . H 4 HOH B 33 305 305 HOH HOH . H 4 HOH B 34 306 306 HOH HOH . H 4 HOH B 35 307 307 HOH HOH . H 4 HOH B 36 308 308 HOH HOH . H 4 HOH B 37 309 309 HOH HOH . H 4 HOH B 38 310 310 HOH HOH . H 4 HOH B 39 311 311 HOH HOH . H 4 HOH B 40 312 312 HOH HOH . H 4 HOH B 41 313 313 HOH HOH . H 4 HOH B 42 314 314 HOH HOH . H 4 HOH B 43 315 315 HOH HOH . H 4 HOH B 44 316 316 HOH HOH . H 4 HOH B 45 317 317 HOH HOH . H 4 HOH B 46 318 318 HOH HOH . H 4 HOH B 47 319 319 HOH HOH . H 4 HOH B 48 320 320 HOH HOH . H 4 HOH B 49 321 321 HOH HOH . H 4 HOH B 50 322 322 HOH HOH . H 4 HOH B 51 323 323 HOH HOH . H 4 HOH B 52 324 324 HOH HOH . H 4 HOH B 53 325 325 HOH HOH . H 4 HOH B 54 326 326 HOH HOH . H 4 HOH B 55 327 327 HOH HOH . H 4 HOH B 56 328 328 HOH HOH . H 4 HOH B 57 329 329 HOH HOH . H 4 HOH B 58 330 330 HOH HOH . H 4 HOH B 59 331 331 HOH HOH . H 4 HOH B 60 332 332 HOH HOH . H 4 HOH B 61 333 333 HOH HOH . H 4 HOH B 62 334 334 HOH HOH . H 4 HOH B 63 335 335 HOH HOH . H 4 HOH B 64 336 336 HOH HOH . H 4 HOH B 65 337 337 HOH HOH . H 4 HOH B 66 338 338 HOH HOH . H 4 HOH B 67 339 339 HOH HOH . H 4 HOH B 68 340 340 HOH HOH . H 4 HOH B 69 341 341 HOH HOH . H 4 HOH B 70 342 342 HOH HOH . H 4 HOH B 71 343 343 HOH HOH . H 4 HOH B 72 344 344 HOH HOH . H 4 HOH B 73 345 345 HOH HOH . H 4 HOH B 74 346 346 HOH HOH . H 4 HOH B 75 347 347 HOH HOH . H 4 HOH B 76 348 348 HOH HOH . H 4 HOH B 77 349 349 HOH HOH . H 4 HOH B 78 350 350 HOH HOH . H 4 HOH B 79 351 351 HOH HOH . H 4 HOH B 80 352 352 HOH HOH . H 4 HOH B 81 353 353 HOH HOH . H 4 HOH B 82 354 354 HOH HOH . H 4 HOH B 83 355 355 HOH HOH . H 4 HOH B 84 356 356 HOH HOH . H 4 HOH B 85 357 357 HOH HOH . H 4 HOH B 86 358 358 HOH HOH . H 4 HOH B 87 359 359 HOH HOH . H 4 HOH B 88 360 360 HOH HOH . H 4 HOH B 89 361 361 HOH HOH . H 4 HOH B 90 362 362 HOH HOH . H 4 HOH B 91 363 363 HOH HOH . H 4 HOH B 92 364 364 HOH HOH . H 4 HOH B 93 365 365 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 16G . . . C 2 0.686 -21.935 22.186 1 26.06 ? C1 16G 269 A 1 HETATM 2 C C2 16G . . . C 2 -0.416 -22.045 21.143 1 25.95 ? C2 16G 269 A 1 HETATM 3 C C3 16G . . . C 2 -0.092 -21.113 19.997 1 23.75 ? C3 16G 269 A 1 HETATM 4 C C4 16G . . . C 2 0.013 -19.697 20.515 1 24.29 ? C4 16G 269 A 1 HETATM 5 C C5 16G . . . C 2 0.992 -19.583 21.722 1 20.33 ? C5 16G 269 A 1 HETATM 6 C C6 16G . . . C 2 0.828 -18.281 22.479 1 20.79 ? C6 16G 269 A 1 HETATM 7 C C7 16G . . . C 2 -1.139 -24.349 21.362 1 35.18 ? C7 16G 269 A 1 HETATM 8 C C8 16G . . . C 2 -1.114 -25.755 20.764 1 40.69 ? C8 16G 269 A 1 HETATM 9 N N2 16G . . . C 2 -0.494 -23.417 20.668 1 31.08 ? N2 16G 269 A 1 HETATM 10 O O1 16G . . . C 2 1.923 -22.212 21.62 1 32.08 ? O1 16G 269 A 1 HETATM 11 O O3 16G . . . C 2 -1.12 -21.184 19.029 1 18.35 ? O3 16G 269 A 1 HETATM 12 O O4 16G . . . C 2 0.461 -18.866 19.46 1 16.51 ? O4 16G 269 A 1 HETATM 13 O O5 16G . . . C 2 0.716 -20.612 22.687 1 27.1 ? O5 16G 269 A 1 HETATM 14 O O6 16G . . . C 2 1.009 -17.229 21.622 1 14.71 ? O6 16G 269 A 1 HETATM 15 O O7 16G . . . C 2 -1.779 -24.081 22.388 1 30.12 ? O7 16G 269 A 1 HETATM 16 P P 16G . . . C 2 -0.053 -16.096 21.378 1 12.74 ? P 16G 269 A 1 HETATM 17 O O1P 16G . . . C 2 0.756 -14.891 21.585 1 12.24 ? O1P 16G 269 A 1 HETATM 18 O O2P 16G . . . C 2 -1.104 -16.206 22.392 1 14.43 ? O2P 16G 269 A 1 HETATM 19 O O3P 16G . . . C 2 -0.446 -16.296 19.996 1 15.54 ? O3P 16G 269 A 1 # _model_server_stats.io_time_ms 40 _model_server_stats.parse_time_ms 59 _model_server_stats.create_model_time_ms 43 _model_server_stats.query_time_ms 375 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 19 #