data_1HP5 # _model_server_result.job_id dQpeSa-JZnUSECcRVPUVOg _model_server_result.datetime_utc '2024-11-23 05:14:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1hp5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":512}' # _entry.id 1HP5 # _exptl.entry_id 1HP5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1HP5 _cell.length_a 133.621 _cell.length_b 133.621 _cell.length_c 174.194 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1HP5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 61 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 PISA,PQS dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I 1 1 A,B,C,D,E,F,G,H,I 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 12_565 x,x-y+1,-z+1/6 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 -66.8105 115.71918 29.032333 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 G N N ? 5 H N N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 269 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 263 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 288 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 282 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.034 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 1HP5 _atom_sites.fract_transf_matrix[1][1] 0.007484 _atom_sites.fract_transf_matrix[1][2] 0.004321 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008642 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005741 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL A 1 507 1 CL CL . C 2 CL A 1 508 2 CL CL . D 2 CL A 1 509 3 CL CL . E 3 SO4 A 1 510 6 SO4 SO4 . F 4 NGT A 1 511 7 NGT NGT . G 5 GOL A 1 512 4 GOL GOL . H 5 GOL A 1 513 5 GOL GOL . I 6 HOH A 1 514 1 HOH HOH . I 6 HOH A 2 515 2 HOH HOH . I 6 HOH A 3 516 3 HOH HOH . I 6 HOH A 4 517 4 HOH HOH . I 6 HOH A 5 518 5 HOH HOH . I 6 HOH A 6 519 6 HOH HOH . I 6 HOH A 7 520 7 HOH HOH . I 6 HOH A 8 521 8 HOH HOH . I 6 HOH A 9 522 9 HOH HOH . I 6 HOH A 10 523 10 HOH HOH . I 6 HOH A 11 524 11 HOH HOH . I 6 HOH A 12 525 12 HOH HOH . I 6 HOH A 13 526 13 HOH HOH . I 6 HOH A 14 527 14 HOH HOH . I 6 HOH A 15 528 15 HOH HOH . I 6 HOH A 16 529 16 HOH HOH . I 6 HOH A 17 530 17 HOH HOH . I 6 HOH A 18 531 18 HOH HOH . I 6 HOH A 19 532 19 HOH HOH . I 6 HOH A 20 533 20 HOH HOH . I 6 HOH A 21 534 21 HOH HOH . I 6 HOH A 22 535 22 HOH HOH . I 6 HOH A 23 536 23 HOH HOH . I 6 HOH A 24 537 24 HOH HOH . I 6 HOH A 25 538 25 HOH HOH . I 6 HOH A 26 539 26 HOH HOH . I 6 HOH A 27 540 27 HOH HOH . I 6 HOH A 28 541 28 HOH HOH . I 6 HOH A 29 542 29 HOH HOH . I 6 HOH A 30 543 30 HOH HOH . I 6 HOH A 31 544 31 HOH HOH . I 6 HOH A 32 545 32 HOH HOH . I 6 HOH A 33 546 33 HOH HOH . I 6 HOH A 34 547 34 HOH HOH . I 6 HOH A 35 548 35 HOH HOH . I 6 HOH A 36 549 36 HOH HOH . I 6 HOH A 37 550 37 HOH HOH . I 6 HOH A 38 551 38 HOH HOH . I 6 HOH A 39 552 39 HOH HOH . I 6 HOH A 40 553 40 HOH HOH . I 6 HOH A 41 554 41 HOH HOH . I 6 HOH A 42 555 42 HOH HOH . I 6 HOH A 43 556 43 HOH HOH . I 6 HOH A 44 557 44 HOH HOH . I 6 HOH A 45 558 45 HOH HOH . I 6 HOH A 46 559 46 HOH HOH . I 6 HOH A 47 560 47 HOH HOH . I 6 HOH A 48 561 48 HOH HOH . I 6 HOH A 49 562 49 HOH HOH . I 6 HOH A 50 563 50 HOH HOH . I 6 HOH A 51 564 51 HOH HOH . I 6 HOH A 52 565 52 HOH HOH . I 6 HOH A 53 566 53 HOH HOH . I 6 HOH A 54 567 54 HOH HOH . I 6 HOH A 55 568 55 HOH HOH . I 6 HOH A 56 569 56 HOH HOH . I 6 HOH A 57 570 57 HOH HOH . I 6 HOH A 58 571 58 HOH HOH . I 6 HOH A 59 572 59 HOH HOH . I 6 HOH A 60 573 60 HOH HOH . I 6 HOH A 61 574 61 HOH HOH . I 6 HOH A 62 575 62 HOH HOH . I 6 HOH A 63 576 63 HOH HOH . I 6 HOH A 64 577 64 HOH HOH . I 6 HOH A 65 578 65 HOH HOH . I 6 HOH A 66 579 66 HOH HOH . I 6 HOH A 67 580 67 HOH HOH . I 6 HOH A 68 581 68 HOH HOH . I 6 HOH A 69 582 69 HOH HOH . I 6 HOH A 70 583 70 HOH HOH . I 6 HOH A 71 584 71 HOH HOH . I 6 HOH A 72 585 72 HOH HOH . I 6 HOH A 73 586 73 HOH HOH . I 6 HOH A 74 587 74 HOH HOH . I 6 HOH A 75 588 75 HOH HOH . I 6 HOH A 76 589 76 HOH HOH . I 6 HOH A 77 590 77 HOH HOH . I 6 HOH A 78 591 78 HOH HOH . I 6 HOH A 79 592 79 HOH HOH . I 6 HOH A 80 593 80 HOH HOH . I 6 HOH A 81 594 81 HOH HOH . I 6 HOH A 82 595 82 HOH HOH . I 6 HOH A 83 596 83 HOH HOH . I 6 HOH A 84 597 84 HOH HOH . I 6 HOH A 85 598 85 HOH HOH . I 6 HOH A 86 599 86 HOH HOH . I 6 HOH A 87 600 87 HOH HOH . I 6 HOH A 88 601 88 HOH HOH . I 6 HOH A 89 602 89 HOH HOH . I 6 HOH A 90 603 90 HOH HOH . I 6 HOH A 91 604 91 HOH HOH . I 6 HOH A 92 605 92 HOH HOH . I 6 HOH A 93 606 93 HOH HOH . I 6 HOH A 94 607 94 HOH HOH . I 6 HOH A 95 608 95 HOH HOH . I 6 HOH A 96 609 96 HOH HOH . I 6 HOH A 97 610 97 HOH HOH . I 6 HOH A 98 611 98 HOH HOH . I 6 HOH A 99 612 99 HOH HOH . I 6 HOH A 100 613 100 HOH HOH . I 6 HOH A 101 614 101 HOH HOH . I 6 HOH A 102 615 102 HOH HOH . I 6 HOH A 103 616 103 HOH HOH . I 6 HOH A 104 617 104 HOH HOH . I 6 HOH A 105 618 105 HOH HOH . I 6 HOH A 106 619 106 HOH HOH . I 6 HOH A 107 620 107 HOH HOH . I 6 HOH A 108 621 108 HOH HOH . I 6 HOH A 109 622 109 HOH HOH . I 6 HOH A 110 623 110 HOH HOH . I 6 HOH A 111 624 111 HOH HOH . I 6 HOH A 112 625 112 HOH HOH . I 6 HOH A 113 626 113 HOH HOH . I 6 HOH A 114 627 114 HOH HOH . I 6 HOH A 115 628 115 HOH HOH . I 6 HOH A 116 629 116 HOH HOH . I 6 HOH A 117 630 117 HOH HOH . I 6 HOH A 118 631 118 HOH HOH . I 6 HOH A 119 632 119 HOH HOH . I 6 HOH A 120 633 120 HOH HOH . I 6 HOH A 121 634 121 HOH HOH . I 6 HOH A 122 635 122 HOH HOH . I 6 HOH A 123 636 123 HOH HOH . I 6 HOH A 124 637 124 HOH HOH . I 6 HOH A 125 638 125 HOH HOH . I 6 HOH A 126 639 126 HOH HOH . I 6 HOH A 127 640 127 HOH HOH . I 6 HOH A 128 641 128 HOH HOH . I 6 HOH A 129 642 129 HOH HOH . I 6 HOH A 130 643 130 HOH HOH . I 6 HOH A 131 644 131 HOH HOH . I 6 HOH A 132 645 132 HOH HOH . I 6 HOH A 133 646 133 HOH HOH . I 6 HOH A 134 647 134 HOH HOH . I 6 HOH A 135 648 135 HOH HOH . I 6 HOH A 136 649 136 HOH HOH . I 6 HOH A 137 650 137 HOH HOH . I 6 HOH A 138 651 138 HOH HOH . I 6 HOH A 139 652 139 HOH HOH . I 6 HOH A 140 653 140 HOH HOH . I 6 HOH A 141 654 141 HOH HOH . I 6 HOH A 142 655 142 HOH HOH . I 6 HOH A 143 656 143 HOH HOH . I 6 HOH A 144 657 144 HOH HOH . I 6 HOH A 145 658 145 HOH HOH . I 6 HOH A 146 659 146 HOH HOH . I 6 HOH A 147 660 147 HOH HOH . I 6 HOH A 148 661 148 HOH HOH . I 6 HOH A 149 662 149 HOH HOH . I 6 HOH A 150 663 150 HOH HOH . I 6 HOH A 151 664 151 HOH HOH . I 6 HOH A 152 665 152 HOH HOH . I 6 HOH A 153 666 153 HOH HOH . I 6 HOH A 154 667 154 HOH HOH . I 6 HOH A 155 668 155 HOH HOH . I 6 HOH A 156 669 156 HOH HOH . I 6 HOH A 157 670 157 HOH HOH . I 6 HOH A 158 671 158 HOH HOH . I 6 HOH A 159 672 159 HOH HOH . I 6 HOH A 160 673 160 HOH HOH . I 6 HOH A 161 674 161 HOH HOH . I 6 HOH A 162 675 162 HOH HOH . I 6 HOH A 163 676 163 HOH HOH . I 6 HOH A 164 677 164 HOH HOH . I 6 HOH A 165 678 165 HOH HOH . I 6 HOH A 166 679 166 HOH HOH . I 6 HOH A 167 680 167 HOH HOH . I 6 HOH A 168 681 168 HOH HOH . I 6 HOH A 169 682 169 HOH HOH . I 6 HOH A 170 683 170 HOH HOH . I 6 HOH A 171 684 171 HOH HOH . I 6 HOH A 172 685 172 HOH HOH . I 6 HOH A 173 686 173 HOH HOH . I 6 HOH A 174 687 174 HOH HOH . I 6 HOH A 175 688 175 HOH HOH . I 6 HOH A 176 689 176 HOH HOH . I 6 HOH A 177 690 177 HOH HOH . I 6 HOH A 178 691 178 HOH HOH . I 6 HOH A 179 692 179 HOH HOH . I 6 HOH A 180 693 180 HOH HOH . I 6 HOH A 181 694 181 HOH HOH . I 6 HOH A 182 695 182 HOH HOH . I 6 HOH A 183 696 183 HOH HOH . I 6 HOH A 184 697 184 HOH HOH . I 6 HOH A 185 698 185 HOH HOH . I 6 HOH A 186 699 186 HOH HOH . I 6 HOH A 187 700 187 HOH HOH . I 6 HOH A 188 701 188 HOH HOH . I 6 HOH A 189 702 189 HOH HOH . I 6 HOH A 190 703 190 HOH HOH . I 6 HOH A 191 704 191 HOH HOH . I 6 HOH A 192 705 192 HOH HOH . I 6 HOH A 193 706 193 HOH HOH . I 6 HOH A 194 707 194 HOH HOH . I 6 HOH A 195 708 195 HOH HOH . I 6 HOH A 196 709 196 HOH HOH . I 6 HOH A 197 710 197 HOH HOH . I 6 HOH A 198 711 198 HOH HOH . I 6 HOH A 199 712 199 HOH HOH . I 6 HOH A 200 713 200 HOH HOH . I 6 HOH A 201 714 201 HOH HOH . I 6 HOH A 202 715 202 HOH HOH . I 6 HOH A 203 716 203 HOH HOH . I 6 HOH A 204 717 204 HOH HOH . I 6 HOH A 205 718 205 HOH HOH . I 6 HOH A 206 719 206 HOH HOH . I 6 HOH A 207 720 207 HOH HOH . I 6 HOH A 208 721 208 HOH HOH . I 6 HOH A 209 722 209 HOH HOH . I 6 HOH A 210 723 210 HOH HOH . I 6 HOH A 211 724 211 HOH HOH . I 6 HOH A 212 725 212 HOH HOH . I 6 HOH A 213 726 213 HOH HOH . I 6 HOH A 214 727 214 HOH HOH . I 6 HOH A 215 728 215 HOH HOH . I 6 HOH A 216 729 216 HOH HOH . I 6 HOH A 217 730 217 HOH HOH . I 6 HOH A 218 731 218 HOH HOH . I 6 HOH A 219 732 219 HOH HOH . I 6 HOH A 220 733 220 HOH HOH . I 6 HOH A 221 734 221 HOH HOH . I 6 HOH A 222 735 222 HOH HOH . I 6 HOH A 223 736 223 HOH HOH . I 6 HOH A 224 737 224 HOH HOH . I 6 HOH A 225 738 225 HOH HOH . I 6 HOH A 226 739 226 HOH HOH . I 6 HOH A 227 740 227 HOH HOH . I 6 HOH A 228 741 228 HOH HOH . I 6 HOH A 229 742 229 HOH HOH . I 6 HOH A 230 743 230 HOH HOH . I 6 HOH A 231 744 231 HOH HOH . I 6 HOH A 232 745 232 HOH HOH . I 6 HOH A 233 746 233 HOH HOH . I 6 HOH A 234 747 234 HOH HOH . I 6 HOH A 235 748 235 HOH HOH . I 6 HOH A 236 749 236 HOH HOH . I 6 HOH A 237 750 237 HOH HOH . I 6 HOH A 238 751 238 HOH HOH . I 6 HOH A 239 752 239 HOH HOH . I 6 HOH A 240 753 240 HOH HOH . I 6 HOH A 241 754 241 HOH HOH . I 6 HOH A 242 755 242 HOH HOH . I 6 HOH A 243 756 243 HOH HOH . I 6 HOH A 244 757 244 HOH HOH . I 6 HOH A 245 758 245 HOH HOH . I 6 HOH A 246 759 246 HOH HOH . I 6 HOH A 247 760 247 HOH HOH . I 6 HOH A 248 761 248 HOH HOH . I 6 HOH A 249 762 249 HOH HOH . I 6 HOH A 250 763 250 HOH HOH . I 6 HOH A 251 764 251 HOH HOH . I 6 HOH A 252 765 252 HOH HOH . I 6 HOH A 253 766 253 HOH HOH . I 6 HOH A 254 767 254 HOH HOH . I 6 HOH A 255 768 255 HOH HOH . I 6 HOH A 256 769 256 HOH HOH . I 6 HOH A 257 770 257 HOH HOH . I 6 HOH A 258 771 258 HOH HOH . I 6 HOH A 259 772 259 HOH HOH . I 6 HOH A 260 773 260 HOH HOH . I 6 HOH A 261 774 261 HOH HOH . I 6 HOH A 262 775 262 HOH HOH . I 6 HOH A 263 776 263 HOH HOH . I 6 HOH A 264 777 264 HOH HOH . I 6 HOH A 265 778 265 HOH HOH . I 6 HOH A 266 779 266 HOH HOH . I 6 HOH A 267 780 267 HOH HOH . I 6 HOH A 268 781 268 HOH HOH . I 6 HOH A 269 782 269 HOH HOH . I 6 HOH A 270 783 270 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . G 5 -6.948 67.76 15.55 1 28.6 ? C1 GOL 512 A 1 HETATM 2 O O1 GOL . . . G 5 -6.787 69.086 15.107 1 29.02 ? O1 GOL 512 A 1 HETATM 3 C C2 GOL . . . G 5 -7.558 66.917 14.451 1 30.45 ? C2 GOL 512 A 1 HETATM 4 O O2 GOL . . . G 5 -7.975 65.637 14.984 1 30.03 ? O2 GOL 512 A 1 HETATM 5 C C3 GOL . . . G 5 -6.541 66.758 13.31 1 28.24 ? C3 GOL 512 A 1 HETATM 6 O O3 GOL . . . G 5 -6.569 67.878 12.422 1 25.39 ? O3 GOL 512 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 266 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 6 #