data_1HPI # _model_server_result.job_id vPCP-7NeyvoGxfWzuw7Lvw _model_server_result.datetime_utc '2025-03-04 07:49:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1hpi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":80}' # _entry.id 1HPI # _exptl.entry_id 1HPI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 351.64 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'IRON/SULFUR CLUSTER' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1HPI _cell.length_a 58.4 _cell.length_b 64.7 _cell.length_c 39.3 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1HPI _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 34 A CYS 34 1_555 B FE1 SF4 . A SF4 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.243 ? metalc ? metalc2 A SG CYS 37 A CYS 37 1_555 B FE2 SF4 . A SF4 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.22 ? metalc ? metalc3 A SG CYS 51 A CYS 51 1_555 B FE3 SF4 . A SF4 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.213 ? metalc ? metalc4 A SG CYS 65 A CYS 65 1_555 B FE4 SF4 . A SF4 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.22 ? # _chem_comp.formula 'Fe4 S4' _chem_comp.formula_weight 351.64 _chem_comp.id SF4 _chem_comp.mon_nstd_flag . _chem_comp.name 'IRON/SULFUR CLUSTER' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag FE1 S2 SF4 sing 269 n n FE1 S3 SF4 sing 270 n n FE1 S4 SF4 sing 271 n n FE2 S1 SF4 sing 272 n n FE2 S3 SF4 sing 273 n n FE2 S4 SF4 sing 274 n n FE3 S1 SF4 sing 275 n n FE3 S2 SF4 sing 276 n n FE3 S4 SF4 sing 277 n n FE4 S1 SF4 sing 278 n n FE4 S2 SF4 sing 279 n n FE4 S3 SF4 sing 280 n n # _atom_sites.entry_id 1HPI _atom_sites.fract_transf_matrix[1][1] 0.017123 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015456 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.025445 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SF4 A 1 80 80 SF4 FS4 . C 3 HOH A 1 81 1 HOH HOH . C 3 HOH A 2 82 2 HOH HOH . C 3 HOH A 3 83 3 HOH HOH . C 3 HOH A 4 84 4 HOH HOH . C 3 HOH A 5 85 5 HOH HOH . C 3 HOH A 6 86 6 HOH HOH . C 3 HOH A 7 87 7 HOH HOH . C 3 HOH A 8 88 8 HOH HOH . C 3 HOH A 9 89 9 HOH HOH . C 3 HOH A 10 90 10 HOH HOH . C 3 HOH A 11 91 11 HOH HOH . C 3 HOH A 12 92 12 HOH HOH . C 3 HOH A 13 93 13 HOH HOH . C 3 HOH A 14 94 14 HOH HOH . C 3 HOH A 15 95 15 HOH HOH . C 3 HOH A 16 96 16 HOH HOH . C 3 HOH A 17 97 17 HOH HOH . C 3 HOH A 18 98 18 HOH HOH . C 3 HOH A 19 99 19 HOH HOH . C 3 HOH A 20 100 20 HOH HOH . C 3 HOH A 21 101 21 HOH HOH . C 3 HOH A 22 102 22 HOH HOH . C 3 HOH A 23 103 23 HOH HOH . C 3 HOH A 24 104 24 HOH HOH . C 3 HOH A 25 105 25 HOH HOH . C 3 HOH A 26 106 26 HOH HOH . C 3 HOH A 27 107 27 HOH HOH . C 3 HOH A 28 108 28 HOH HOH . C 3 HOH A 29 109 29 HOH HOH . C 3 HOH A 30 110 30 HOH HOH . C 3 HOH A 31 111 31 HOH HOH . C 3 HOH A 32 112 32 HOH HOH . C 3 HOH A 33 113 33 HOH HOH . C 3 HOH A 34 114 34 HOH HOH . C 3 HOH A 35 115 35 HOH HOH . C 3 HOH A 36 116 36 HOH HOH . C 3 HOH A 37 117 37 HOH HOH . C 3 HOH A 38 118 38 HOH HOH . C 3 HOH A 39 119 39 HOH HOH . C 3 HOH A 40 120 40 HOH HOH . C 3 HOH A 41 121 41 HOH HOH . C 3 HOH A 42 122 42 HOH HOH . C 3 HOH A 43 123 43 HOH HOH . C 3 HOH A 44 124 44 HOH HOH . C 3 HOH A 45 125 45 HOH HOH . C 3 HOH A 46 126 46 HOH HOH . C 3 HOH A 47 127 47 HOH HOH . C 3 HOH A 48 128 48 HOH HOH . C 3 HOH A 49 129 49 HOH HOH . C 3 HOH A 50 130 50 HOH HOH . C 3 HOH A 51 131 51 HOH HOH . C 3 HOH A 52 132 52 HOH HOH . C 3 HOH A 53 133 53 HOH HOH . C 3 HOH A 54 134 54 HOH HOH . C 3 HOH A 55 135 55 HOH HOH . C 3 HOH A 56 136 56 HOH HOH . C 3 HOH A 57 137 57 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE1 SF4 . . . B 2 49.361 76.806 3.706 1 8.54 ? FE1 SF4 80 A 1 HETATM 2 FE FE2 SF4 . . . B 2 50.28 75.168 5.699 1 10.35 ? FE2 SF4 80 A 1 HETATM 3 FE FE3 SF4 . . . B 2 48.172 76.864 6.128 1 9.58 ? FE3 SF4 80 A 1 HETATM 4 FE FE4 SF4 . . . B 2 50.675 77.884 5.765 1 8.32 ? FE4 SF4 80 A 1 HETATM 5 S S1 SF4 . . . B 2 50.007 76.52 7.427 1 8.26 ? S1 SF4 80 A 1 HETATM 6 S S2 SF4 . . . B 2 48.775 78.639 4.825 1 8.8 ? S2 SF4 80 A 1 HETATM 7 S S3 SF4 . . . B 2 51.523 76.427 4.321 1 7.13 ? S3 SF4 80 A 1 HETATM 8 S S4 SF4 . . . B 2 48.248 75.149 4.658 1 8.22 ? S4 SF4 80 A 1 # _model_server_stats.io_time_ms 38 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 684 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 8 #