data_1HQV # _model_server_result.job_id xPP3QkmcFLYKpvHSE2czgQ _model_server_result.datetime_utc '2024-10-18 16:20:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1hqv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":999}' # _entry.id 1HQV # _exptl.entry_id 1HQV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1HQV _cell.length_a 72.06 _cell.length_b 72.06 _cell.length_c 91.52 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1HQV _symmetry.cell_setting ? _symmetry.Int_Tables_number 91 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 PISA dimeric 2 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F 1 1,2 A,B,C,D,E,F 2 1,3 A,B,C,D,E,F 3 1,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 6_555 x,-y,-z+1/2 1 0 0 0 -1 0 0 0 -1 0 0 45.76 3 'crystal symmetry operation' 5_656 -x+1,y,-z+1 -1 0 0 0 1 0 0 0 -1 72.06 0 91.52 4 'crystal symmetry operation' 7_555 y,x,-z+3/4 0 1 0 1 0 0 0 0 -1 0 0 68.64 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 36 A ASP 36 1_555 C CA CA . A CA 997 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.282 ? metalc ? metalc2 A OD1 ASP 38 A ASP 38 1_555 C CA CA . A CA 997 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.046 ? metalc ? metalc3 A OD2 ASP 38 A ASP 38 1_555 C CA CA . A CA 997 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.164 ? metalc ? metalc4 A OG SER 40 A SER 40 1_555 C CA CA . A CA 997 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.574 ? metalc ? metalc5 A O VAL 42 A VAL 42 1_555 C CA CA . A CA 997 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.38 ? metalc ? metalc6 A OE1 GLU 47 A GLU 47 1_555 C CA CA . A CA 997 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.617 ? metalc ? metalc7 A OE2 GLU 47 A GLU 47 1_555 C CA CA . A CA 997 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.479 ? metalc ? metalc8 A OD1 ASP 103 A ASP 103 1_555 D CA CA . A CA 998 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.268 ? metalc ? metalc9 A OD2 ASP 105 A ASP 105 1_555 D CA CA . A CA 998 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.509 ? metalc ? metalc10 A OD1 ASN 106 A ASN 106 1_555 B CA CA . A CA 996 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? metalc ? metalc11 A OD1 ASN 106 A ASN 106 7_555 B CA CA . A CA 996 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? metalc ? metalc12 A OG SER 107 A SER 107 1_555 D CA CA . A CA 998 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.572 ? metalc ? metalc13 A O MET 109 A MET 109 1_555 D CA CA . A CA 998 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.338 ? metalc ? metalc14 A OE2 GLU 114 A GLU 114 1_555 D CA CA . A CA 998 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.239 ? metalc ? metalc15 A OE1 GLU 114 A GLU 114 1_555 D CA CA . A CA 998 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.358 ? metalc ? metalc16 A OD1 ASP 169 A ASP 169 1_555 E CA CA . A CA 999 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.342 ? metalc ? metalc17 A OD2 ASP 171 A ASP 171 1_555 E CA CA . A CA 999 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.269 ? metalc ? metalc18 A OD1 ASP 171 A ASP 171 1_555 E CA CA . A CA 999 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? metalc ? metalc19 A OD1 ASP 173 A ASP 173 1_555 E CA CA . A CA 999 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.213 ? metalc ? metalc20 A O TRP 175 A TRP 175 1_555 E CA CA . A CA 999 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.383 ? metalc ? metalc21 F O HOH . A HOH 432 1_555 E CA CA . A CA 999 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.313 ? metalc ? metalc22 F O HOH . A HOH 433 1_555 D CA CA . A CA 998 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.594 ? metalc ? metalc23 F O HOH . A HOH 434 1_555 E CA CA . A CA 999 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.718 ? metalc ? metalc24 F O HOH . A HOH 435 1_555 C CA CA . A CA 997 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.174 ? metalc ? metalc25 F O HOH . A HOH 436 1_555 B CA CA . A CA 996 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.219 ? metalc ? metalc26 F O HOH . A HOH 436 7_555 B CA CA . A CA 996 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.219 ? metalc ? metalc27 F O HOH . A HOH 437 1_555 B CA CA . A CA 996 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.143 ? metalc ? metalc28 F O HOH . A HOH 437 7_555 B CA CA . A CA 996 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.143 ? metalc ? metalc29 F O HOH . A HOH 444 1_555 B CA CA . A CA 996 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.404 ? metalc ? metalc30 F O HOH . A HOH 444 7_555 B CA CA . A CA 996 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.404 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1HQV _atom_sites.fract_transf_matrix[1][1] 0.013877 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013877 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010927 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 996 996 CA CA2 . C 2 CA A 1 997 997 CA CA2 . D 2 CA A 1 998 998 CA CA2 . E 2 CA A 1 999 999 CA CA2 . F 3 HOH A 1 400 400 HOH TIP . F 3 HOH A 2 401 401 HOH TIP . F 3 HOH A 3 402 402 HOH TIP . F 3 HOH A 4 403 403 HOH TIP . F 3 HOH A 5 404 404 HOH TIP . F 3 HOH A 6 405 405 HOH TIP . F 3 HOH A 7 406 406 HOH TIP . F 3 HOH A 8 407 407 HOH TIP . F 3 HOH A 9 408 408 HOH TIP . F 3 HOH A 10 409 409 HOH TIP . F 3 HOH A 11 410 410 HOH TIP . F 3 HOH A 12 411 411 HOH TIP . F 3 HOH A 13 412 412 HOH TIP . F 3 HOH A 14 413 413 HOH TIP . F 3 HOH A 15 414 414 HOH TIP . F 3 HOH A 16 415 415 HOH TIP . F 3 HOH A 17 416 416 HOH TIP . F 3 HOH A 18 417 417 HOH TIP . F 3 HOH A 19 418 418 HOH TIP . F 3 HOH A 20 419 419 HOH TIP . F 3 HOH A 21 420 420 HOH TIP . F 3 HOH A 22 421 421 HOH TIP . F 3 HOH A 23 422 422 HOH TIP . F 3 HOH A 24 423 423 HOH TIP . F 3 HOH A 25 424 424 HOH TIP . F 3 HOH A 26 425 425 HOH TIP . F 3 HOH A 27 426 426 HOH TIP . F 3 HOH A 28 427 427 HOH TIP . F 3 HOH A 29 428 428 HOH TIP . F 3 HOH A 30 429 429 HOH TIP . F 3 HOH A 31 430 430 HOH TIP . F 3 HOH A 32 431 431 HOH TIP . F 3 HOH A 33 432 432 HOH TIP . F 3 HOH A 34 433 433 HOH TIP . F 3 HOH A 35 434 434 HOH TIP . F 3 HOH A 36 435 435 HOH TIP . F 3 HOH A 37 436 436 HOH TIP . F 3 HOH A 38 437 437 HOH TIP . F 3 HOH A 39 438 438 HOH TIP . F 3 HOH A 40 439 439 HOH TIP . F 3 HOH A 41 440 440 HOH TIP . F 3 HOH A 42 441 441 HOH TIP . F 3 HOH A 43 442 442 HOH TIP . F 3 HOH A 44 443 443 HOH TIP . F 3 HOH A 45 444 444 HOH TIP . F 3 HOH A 46 445 445 HOH TIP . F 3 HOH A 47 446 446 HOH TIP . F 3 HOH A 48 447 447 HOH TIP . F 3 HOH A 49 448 448 HOH TIP . F 3 HOH A 50 449 449 HOH TIP . F 3 HOH A 51 450 450 HOH TIP . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 2 _atom_site.Cartn_x 32.826 _atom_site.Cartn_y -22.495 _atom_site.Cartn_z 38.737 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 50.83 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 999 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 375 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #