data_1HR8 # _model_server_result.job_id pSW0MujHIvQ8YdsF1YWgvw _model_server_result.datetime_utc '2024-10-24 04:33:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1hr8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":501}' # _entry.id 1HR8 # _exptl.entry_id 1HR8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1HR8 _cell.length_a 134.26 _cell.length_b 178.12 _cell.length_c 202.21 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1HR8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PQS trimeric 3 author_and_software_defined_assembly 1 PQS trimeric 3 author_and_software_defined_assembly 2 PQS trimeric 3 author_and_software_defined_assembly 3 PQS trimeric 3 author_and_software_defined_assembly 4 PISA dodecameric 12 software_defined_assembly 5 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,I,M,N,U 1 1 C,D,J,O,V 2 1 E,F,K,P,S 3 1 G,H,L,Q,R,T 4 1 C,D,J,O,V 5 2 A,B,E,F,G,H,I,K,L,M,N,P,Q,R,S,T,U 5 1 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_645 -x+1,y-1/2,-z+1/2 -1 0 0 0 1 0 0 0 -1 134.26 -89.06 101.105 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 N N N ? 5 O N N ? 5 P N N ? 5 R N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B NE2 HIS 51 B HIS 70 1_555 N ZN ZN . B ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? metalc ? metalc2 B NE2 HIS 55 B HIS 74 1_555 N ZN ZN . B ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.997 ? metalc ? metalc3 B OE1 GLU 131 B GLU 150 1_555 N ZN ZN . B ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.155 ? metalc ? metalc4 B OE2 GLU 131 B GLU 150 1_555 N ZN ZN . B ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.195 ? metalc ? metalc5 N ZN ZN . B ZN 501 1_555 U O HOH . O HOH 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.997 ? metalc ? metalc6 D NE2 HIS 51 D HIS 70 1_555 O ZN ZN . D ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? metalc ? metalc7 D NE2 HIS 55 D HIS 74 1_555 O ZN ZN . D ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.994 ? metalc ? metalc8 D OE1 GLU 131 D GLU 150 1_555 O ZN ZN . D ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.149 ? metalc ? metalc9 D OE2 GLU 131 D GLU 150 1_555 O ZN ZN . D ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.192 ? metalc ? metalc10 O ZN ZN . D ZN 502 1_555 V O HOH . P HOH 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? metalc ? metalc11 S O HOH . F HOH 3 1_555 P ZN ZN . F ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? metalc ? metalc12 F NE2 HIS 51 F HIS 70 1_555 P ZN ZN . F ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.998 ? metalc ? metalc13 F NE2 HIS 55 F HIS 74 1_555 P ZN ZN . F ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.009 ? metalc ? metalc14 F OE1 GLU 131 F GLU 150 1_555 P ZN ZN . F ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.153 ? metalc ? metalc15 F OE2 GLU 131 F GLU 150 1_555 P ZN ZN . F ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.176 ? metalc ? metalc16 T O HOH . H HOH 4 1_555 R ZN ZN . H ZN 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.147 ? metalc ? metalc17 H NE2 HIS 51 H HIS 70 1_555 R ZN ZN . H ZN 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? metalc ? metalc18 H NE2 HIS 55 H HIS 74 1_555 R ZN ZN . H ZN 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? metalc ? metalc19 H OE1 GLU 131 H GLU 150 1_555 R ZN ZN . H ZN 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.255 ? metalc ? metalc20 H OE2 GLU 131 H GLU 150 1_555 R ZN ZN . H ZN 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.234 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1HR8 _atom_sites.fract_transf_matrix[1][1] 0.007448 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005614 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004945 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code M 4 EPE A 1 489 202 EPE EPE . N 5 ZN B 1 501 501 ZN ZN . O 5 ZN D 1 502 502 ZN ZN . P 5 ZN F 1 503 503 ZN ZN . Q 4 EPE G 1 489 201 EPE EPE . R 5 ZN H 1 504 504 ZN ZN . S 6 HOH F 1 3 3 HOH HOH . T 6 HOH H 1 4 4 HOH HOH . U 6 HOH O 1 1 1 HOH HOH . V 6 HOH P 1 26 2 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id N _atom_site.label_entity_id 5 _atom_site.Cartn_x 17.509 _atom_site.Cartn_y 43.723 _atom_site.Cartn_z 42.433 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 72.75 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 501 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 30 _model_server_stats.query_time_ms 291 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #