data_1HRC # _model_server_result.job_id e5YIAfWJwBzMumFP84vYiQ _model_server_result.datetime_utc '2024-11-30 16:54:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1hrc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":105}' # _entry.id 1HRC # _exptl.entry_id 1HRC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 618.503 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'HEME C' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1HRC _cell.length_a 58.397 _cell.length_b 58.397 _cell.length_c 42.091 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1HRC _symmetry.cell_setting ? _symmetry.Int_Tables_number 78 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 43' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ACE 1 A ACE 0 1_555 A N GLY 2 A GLY 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale2 A SG CYS 15 A CYS 14 1_555 B CAB HEC . A HEC 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.754 ? covale ? covale3 A SG CYS 18 A CYS 17 1_555 B CAC HEC . A HEC 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.864 ? metalc ? metalc1 A NE2 HIS 19 A HIS 18 1_555 B FE HEC . A HEC 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? metalc ? metalc2 A SD MET 81 A MET 80 1_555 B FE HEC . A HEC 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.324 ? # _chem_comp.formula 'C34 H34 Fe N4 O4' _chem_comp.formula_weight 618.503 _chem_comp.id HEC _chem_comp.mon_nstd_flag . _chem_comp.name 'HEME C' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag FE NA HEC sing 135 n n FE NB HEC sing 136 n n FE NC HEC sing 137 n n FE ND HEC sing 138 n n CHA C1A HEC doub 139 n n CHA C4D HEC sing 140 n n CHA HHA HEC sing 141 n n CHB C4A HEC doub 142 n n CHB C1B HEC sing 143 n n CHB HHB HEC sing 144 n n CHC C4B HEC doub 145 n n CHC C1C HEC sing 146 n n CHC HHC HEC sing 147 n n CHD C4C HEC doub 148 n n CHD C1D HEC sing 149 n n CHD HHD HEC sing 150 n n NA C1A HEC sing 151 n y NA C4A HEC sing 152 n y C1A C2A HEC sing 153 n y C2A C3A HEC doub 154 n y C2A CAA HEC sing 155 n n C3A C4A HEC sing 156 n y C3A CMA HEC sing 157 n n CMA HMA1 HEC sing 158 n n CMA HMA2 HEC sing 159 n n CMA HMA3 HEC sing 160 n n CAA CBA HEC sing 161 n n CAA HAA1 HEC sing 162 n n CAA HAA2 HEC sing 163 n n CBA CGA HEC sing 164 n n CBA HBA1 HEC sing 165 n n CBA HBA2 HEC sing 166 n n CGA O1A HEC doub 167 n n CGA O2A HEC sing 168 n n O2A H2A HEC sing 169 n n NB C1B HEC sing 170 n y NB C4B HEC sing 171 n y C1B C2B HEC doub 172 n y C2B C3B HEC sing 173 n y C2B CMB HEC sing 174 n n C3B C4B HEC sing 175 n y C3B CAB HEC doub 176 e n CMB HMB1 HEC sing 177 n n CMB HMB2 HEC sing 178 n n CMB HMB3 HEC sing 179 n n CAB CBB HEC sing 180 n n CAB HAB HEC sing 181 n n CBB HBB1 HEC sing 182 n n CBB HBB2 HEC sing 183 n n CBB HBB3 HEC sing 184 n n NC C1C HEC sing 185 n y NC C4C HEC sing 186 n y C1C C2C HEC doub 187 n y C2C C3C HEC sing 188 n y C2C CMC HEC sing 189 n n C3C C4C HEC sing 190 n y C3C CAC HEC doub 191 e n CMC HMC1 HEC sing 192 n n CMC HMC2 HEC sing 193 n n CMC HMC3 HEC sing 194 n n CAC CBC HEC sing 195 n n CAC HAC HEC sing 196 n n CBC HBC1 HEC sing 197 n n CBC HBC2 HEC sing 198 n n CBC HBC3 HEC sing 199 n n ND C1D HEC sing 200 n y ND C4D HEC sing 201 n y C1D C2D HEC doub 202 n y C2D C3D HEC sing 203 n y C2D CMD HEC sing 204 n n C3D C4D HEC doub 205 n y C3D CAD HEC sing 206 n n CMD HMD1 HEC sing 207 n n CMD HMD2 HEC sing 208 n n CMD HMD3 HEC sing 209 n n CAD CBD HEC sing 210 n n CAD HAD1 HEC sing 211 n n CAD HAD2 HEC sing 212 n n CBD CGD HEC sing 213 n n CBD HBD1 HEC sing 214 n n CBD HBD2 HEC sing 215 n n CGD O1D HEC doub 216 n n CGD O2D HEC sing 217 n n O2D H2D HEC sing 218 n n # _atom_sites.entry_id 1HRC _atom_sites.fract_transf_matrix[1][1] 0.017124 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017124 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.023758 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEC A 1 105 105 HEC HEM . C 3 HOH A 1 106 106 HOH HOH . C 3 HOH A 2 107 107 HOH HOH . C 3 HOH A 3 108 108 HOH HOH . C 3 HOH A 4 109 109 HOH HOH . C 3 HOH A 5 110 110 HOH HOH . C 3 HOH A 6 111 111 HOH HOH . C 3 HOH A 7 112 112 HOH HOH . C 3 HOH A 8 113 113 HOH HOH . C 3 HOH A 9 114 114 HOH HOH . C 3 HOH A 10 115 115 HOH HOH . C 3 HOH A 11 116 116 HOH HOH . C 3 HOH A 12 117 117 HOH HOH . C 3 HOH A 13 118 118 HOH HOH . C 3 HOH A 14 119 119 HOH HOH . C 3 HOH A 15 120 120 HOH HOH . C 3 HOH A 16 121 121 HOH HOH . C 3 HOH A 17 122 122 HOH HOH . C 3 HOH A 18 123 123 HOH HOH . C 3 HOH A 19 124 124 HOH HOH . C 3 HOH A 20 125 125 HOH HOH . C 3 HOH A 21 126 126 HOH HOH . C 3 HOH A 22 127 127 HOH HOH . C 3 HOH A 23 128 128 HOH HOH . C 3 HOH A 24 129 129 HOH HOH . C 3 HOH A 25 130 130 HOH HOH . C 3 HOH A 26 131 131 HOH HOH . C 3 HOH A 27 132 132 HOH HOH . C 3 HOH A 28 133 133 HOH HOH . C 3 HOH A 29 134 134 HOH HOH . C 3 HOH A 30 135 135 HOH HOH . C 3 HOH A 31 136 136 HOH HOH . C 3 HOH A 32 137 137 HOH HOH . C 3 HOH A 33 138 138 HOH HOH . C 3 HOH A 34 139 139 HOH HOH . C 3 HOH A 35 140 140 HOH HOH . C 3 HOH A 36 141 141 HOH HOH . C 3 HOH A 37 142 142 HOH HOH . C 3 HOH A 38 143 143 HOH HOH . C 3 HOH A 39 144 144 HOH HOH . C 3 HOH A 40 145 145 HOH HOH . C 3 HOH A 41 146 146 HOH HOH . C 3 HOH A 42 147 147 HOH HOH . C 3 HOH A 43 148 148 HOH HOH . C 3 HOH A 44 149 149 HOH HOH . C 3 HOH A 45 150 150 HOH HOH . C 3 HOH A 46 151 151 HOH HOH . C 3 HOH A 47 152 152 HOH HOH . C 3 HOH A 48 153 153 HOH HOH . C 3 HOH A 49 154 154 HOH HOH . C 3 HOH A 50 155 155 HOH HOH . C 3 HOH A 51 156 156 HOH HOH . C 3 HOH A 52 157 157 HOH HOH . C 3 HOH A 53 158 158 HOH HOH . C 3 HOH A 54 159 159 HOH HOH . C 3 HOH A 55 160 160 HOH HOH . C 3 HOH A 56 161 161 HOH HOH . C 3 HOH A 57 162 162 HOH HOH . C 3 HOH A 58 163 163 HOH HOH . C 3 HOH A 59 164 164 HOH HOH . C 3 HOH A 60 165 165 HOH HOH . C 3 HOH A 61 166 166 HOH HOH . C 3 HOH A 62 167 167 HOH HOH . C 3 HOH A 63 168 168 HOH HOH . C 3 HOH A 64 169 169 HOH HOH . C 3 HOH A 65 170 170 HOH HOH . C 3 HOH A 66 171 171 HOH HOH . C 3 HOH A 67 172 172 HOH HOH . C 3 HOH A 68 173 173 HOH HOH . C 3 HOH A 69 174 174 HOH HOH . C 3 HOH A 70 175 175 HOH HOH . C 3 HOH A 71 176 176 HOH HOH . C 3 HOH A 72 177 177 HOH HOH . C 3 HOH A 73 178 178 HOH HOH . C 3 HOH A 74 179 179 HOH HOH . C 3 HOH A 75 180 180 HOH HOH . C 3 HOH A 76 181 181 HOH HOH . C 3 HOH A 77 182 182 HOH HOH . C 3 HOH A 78 183 183 HOH HOH . C 3 HOH A 79 184 184 HOH HOH . C 3 HOH A 80 185 185 HOH HOH . C 3 HOH A 81 186 186 HOH HOH . C 3 HOH A 82 187 187 HOH HOH . C 3 HOH A 83 188 188 HOH HOH . C 3 HOH A 84 189 189 HOH HOH . C 3 HOH A 85 190 190 HOH HOH . C 3 HOH A 86 191 191 HOH HOH . C 3 HOH A 87 192 192 HOH HOH . C 3 HOH A 88 193 193 HOH HOH . C 3 HOH A 89 194 194 HOH HOH . C 3 HOH A 90 195 195 HOH HOH . C 3 HOH A 91 196 196 HOH HOH . C 3 HOH A 92 197 197 HOH HOH . C 3 HOH A 93 198 198 HOH HOH . C 3 HOH A 94 199 199 HOH HOH . C 3 HOH A 95 200 200 HOH HOH . C 3 HOH A 96 201 201 HOH HOH . C 3 HOH A 97 202 202 HOH HOH . C 3 HOH A 98 203 203 HOH HOH . C 3 HOH A 99 204 204 HOH HOH . C 3 HOH A 100 205 205 HOH HOH . C 3 HOH A 101 206 206 HOH HOH . C 3 HOH A 102 207 207 HOH HOH . C 3 HOH A 103 208 208 HOH HOH . C 3 HOH A 104 209 209 HOH HOH . C 3 HOH A 105 210 210 HOH HOH . C 3 HOH A 106 211 211 HOH HOH . C 3 HOH A 107 212 212 HOH HOH . C 3 HOH A 108 213 213 HOH HOH . C 3 HOH A 109 214 214 HOH HOH . C 3 HOH A 110 215 215 HOH HOH . C 3 HOH A 111 216 216 HOH HOH . C 3 HOH A 112 217 217 HOH HOH . C 3 HOH A 113 218 218 HOH HOH . C 3 HOH A 114 219 219 HOH HOH . C 3 HOH A 115 220 220 HOH HOH . C 3 HOH A 116 221 221 HOH HOH . C 3 HOH A 117 222 222 HOH HOH . C 3 HOH A 118 223 223 HOH HOH . C 3 HOH A 119 224 224 HOH HOH . C 3 HOH A 120 225 225 HOH HOH . C 3 HOH A 121 226 226 HOH HOH . C 3 HOH A 122 227 227 HOH HOH . C 3 HOH A 123 228 228 HOH HOH . C 3 HOH A 124 229 229 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE HEC . . . B 2 44.63 28.127 5.911 1 15.26 ? FE HEC 105 A 1 HETATM 2 C CHA HEC . . . B 2 43.603 27.259 9.122 1 14.76 ? CHA HEC 105 A 1 HETATM 3 C CHB HEC . . . B 2 46.15 25.184 5.602 1 18.27 ? CHB HEC 105 A 1 HETATM 4 C CHC HEC . . . B 2 44.907 28.735 2.567 1 15.08 ? CHC HEC 105 A 1 HETATM 5 C CHD HEC . . . B 2 43.828 31.352 6.47 1 12.57 ? CHD HEC 105 A 1 HETATM 6 N NA HEC . . . B 2 44.854 26.575 7.169 1 13.92 ? NA HEC 105 A 1 HETATM 7 C C1A HEC . . . B 2 44.331 26.333 8.412 1 14.25 ? C1A HEC 105 A 1 HETATM 8 C C2A HEC . . . B 2 44.604 24.936 8.743 1 13.02 ? C2A HEC 105 A 1 HETATM 9 C C3A HEC . . . B 2 45.274 24.38 7.785 1 10.84 ? C3A HEC 105 A 1 HETATM 10 C C4A HEC . . . B 2 45.455 25.382 6.751 1 12.01 ? C4A HEC 105 A 1 HETATM 11 C CMA HEC . . . B 2 45.922 22.989 7.441 1 6.24 ? CMA HEC 105 A 1 HETATM 12 C CAA HEC . . . B 2 44.137 24.309 10.098 1 12.87 ? CAA HEC 105 A 1 HETATM 13 C CBA HEC . . . B 2 45.39 24.29 11.068 1 13.19 ? CBA HEC 105 A 1 HETATM 14 C CGA HEC . . . B 2 45.165 23.63 12.392 1 15.7 ? CGA HEC 105 A 1 HETATM 15 O O1A HEC . . . B 2 45.941 24.023 13.329 1 19.9 ? O1A HEC 105 A 1 HETATM 16 O O2A HEC . . . B 2 44.26 22.763 12.481 1 11.1 ? O2A HEC 105 A 1 HETATM 17 N NB HEC . . . B 2 45.38 27.146 4.404 1 15.12 ? NB HEC 105 A 1 HETATM 18 C C1B HEC . . . B 2 46.045 25.929 4.454 1 17.59 ? C1B HEC 105 A 1 HETATM 19 C C2B HEC . . . B 2 46.548 25.581 3.168 1 17.42 ? C2B HEC 105 A 1 HETATM 20 C C3B HEC . . . B 2 46.194 26.543 2.315 1 14.51 ? C3B HEC 105 A 1 HETATM 21 C C4B HEC . . . B 2 45.475 27.582 3.075 1 16.86 ? C4B HEC 105 A 1 HETATM 22 C CMB HEC . . . B 2 47.35 24.278 2.836 1 18.73 ? CMB HEC 105 A 1 HETATM 23 C CAB HEC . . . B 2 46.46 26.659 0.811 1 16.71 ? CAB HEC 105 A 1 HETATM 24 C CBB HEC . . . B 2 45.651 25.817 -0.177 1 12.08 ? CBB HEC 105 A 1 HETATM 25 N NC HEC . . . B 2 44.378 29.757 4.719 1 11.9 ? NC HEC 105 A 1 HETATM 26 C C1C HEC . . . B 2 44.545 29.825 3.342 1 11.41 ? C1C HEC 105 A 1 HETATM 27 C C2C HEC . . . B 2 44.369 31.176 2.919 1 17.75 ? C2C HEC 105 A 1 HETATM 28 C C3C HEC . . . B 2 44.042 31.935 4 1 12.51 ? C3C HEC 105 A 1 HETATM 29 C C4C HEC . . . B 2 44.1 31.041 5.151 1 13.42 ? C4C HEC 105 A 1 HETATM 30 C CMC HEC . . . B 2 44.499 31.68 1.456 1 20.66 ? CMC HEC 105 A 1 HETATM 31 C CAC HEC . . . B 2 43.861 33.464 4.089 1 13.51 ? CAC HEC 105 A 1 HETATM 32 C CBC HEC . . . B 2 43.018 34.168 3.003 1 8.94 ? CBC HEC 105 A 1 HETATM 33 N ND HEC . . . B 2 43.902 29.128 7.459 1 13.91 ? ND HEC 105 A 1 HETATM 34 C C1D HEC . . . B 2 43.634 30.469 7.505 1 12.07 ? C1D HEC 105 A 1 HETATM 35 C C2D HEC . . . B 2 43.059 30.773 8.808 1 14.72 ? C2D HEC 105 A 1 HETATM 36 C C3D HEC . . . B 2 42.996 29.669 9.505 1 13.65 ? C3D HEC 105 A 1 HETATM 37 C C4D HEC . . . B 2 43.497 28.578 8.693 1 17.25 ? C4D HEC 105 A 1 HETATM 38 C CMD HEC . . . B 2 42.64 32.208 9.219 1 10.76 ? CMD HEC 105 A 1 HETATM 39 C CAD HEC . . . B 2 42.465 29.476 10.959 1 14.25 ? CAD HEC 105 A 1 HETATM 40 C CBD HEC . . . B 2 40.94 29.307 10.886 1 15.19 ? CBD HEC 105 A 1 HETATM 41 C CGD HEC . . . B 2 40.197 29.179 12.181 1 14.64 ? CGD HEC 105 A 1 HETATM 42 O O1D HEC . . . B 2 40.769 29.121 13.27 1 13.38 ? O1D HEC 105 A 1 HETATM 43 O O2D HEC . . . B 2 38.963 29.108 11.98 1 15.7 ? O2D HEC 105 A 1 # _model_server_stats.io_time_ms 69 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 1381 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 43 #