data_1HRM
#
_model_server_result.job_id            wOgme8zFfR6fGibM5Eycog 
_model_server_result.datetime_utc      '2024-12-26 17:12:25' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1hrm 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":154}' 
#
_entry.id    1HRM 
#
_exptl.entry_id    1HRM 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              616.487 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PROTOPORPHYRIN IX CONTAINING FE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          107.06 
_cell.angle_gamma         90 
_cell.entry_id            1HRM 
_cell.length_a            65.36 
_cell.length_b            28.9 
_cell.length_c            35.96 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1HRM 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_struct_conn.conn_type_id                   metalc 
_struct_conn.details                        ? 
_struct_conn.id                             metalc1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            OH 
_struct_conn.ptnr1_label_comp_id            TYR 
_struct_conn.ptnr1_label_seq_id             93 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             TYR 
_struct_conn.ptnr1_auth_seq_id              93 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            C 
_struct_conn.ptnr2_label_atom_id            FE 
_struct_conn.ptnr2_label_comp_id            HEM 
_struct_conn.ptnr2_label_seq_id             . 
_struct_conn.ptnr2_auth_asym_id             A 
_struct_conn.ptnr2_auth_comp_id             HEM 
_struct_conn.ptnr2_auth_seq_id              154 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                1.9 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C34 H32 Fe N4 O4' 
_chem_comp.formula_weight    616.487 
_chem_comp.id                HEM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PROTOPORPHYRIN IX CONTAINING FE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     HEME 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CHA C1A HEM sing 116 n n 
CHA C4D HEM doub 117 n n 
CHA HHA HEM sing 118 n n 
CHB C4A HEM sing 119 n n 
CHB C1B HEM doub 120 n n 
CHB HHB HEM sing 121 n n 
CHC C4B HEM sing 122 n n 
CHC C1C HEM doub 123 n n 
CHC HHC HEM sing 124 n n 
CHD C4C HEM doub 125 n n 
CHD C1D HEM sing 126 n n 
CHD HHD HEM sing 127 n n 
C1A C2A HEM doub 128 n y 
C1A NA HEM sing 129 n y 
C2A C3A HEM sing 130 n y 
C2A CAA HEM sing 131 n n 
C3A C4A HEM doub 132 n y 
C3A CMA HEM sing 133 n n 
C4A NA HEM sing 134 n y 
CMA HMA HEM sing 135 n n 
CMA HMAA HEM sing 136 n n 
CMA HMAB HEM sing 137 n n 
CAA CBA HEM sing 138 n n 
CAA HAA HEM sing 139 n n 
CAA HAAA HEM sing 140 n n 
CBA CGA HEM sing 141 n n 
CBA HBA HEM sing 142 n n 
CBA HBAA HEM sing 143 n n 
CGA O1A HEM doub 144 n n 
CGA O2A HEM sing 145 n n 
C1B C2B HEM sing 146 n n 
C1B NB HEM sing 147 n n 
C2B C3B HEM doub 148 n n 
C2B CMB HEM sing 149 n n 
C3B C4B HEM sing 150 n n 
C3B CAB HEM sing 151 n n 
C4B NB HEM doub 152 n n 
CMB HMB HEM sing 153 n n 
CMB HMBA HEM sing 154 n n 
CMB HMBB HEM sing 155 n n 
CAB CBB HEM doub 156 n n 
CAB HAB HEM sing 157 n n 
CBB HBB HEM sing 158 n n 
CBB HBBA HEM sing 159 n n 
C1C C2C HEM sing 160 n y 
C1C NC HEM sing 161 n y 
C2C C3C HEM doub 162 n y 
C2C CMC HEM sing 163 n n 
C3C C4C HEM sing 164 n y 
C3C CAC HEM sing 165 n n 
C4C NC HEM sing 166 n y 
CMC HMC HEM sing 167 n n 
CMC HMCA HEM sing 168 n n 
CMC HMCB HEM sing 169 n n 
CAC CBC HEM doub 170 n n 
CAC HAC HEM sing 171 n n 
CBC HBC HEM sing 172 n n 
CBC HBCA HEM sing 173 n n 
C1D C2D HEM sing 174 n n 
C1D ND HEM doub 175 n n 
C2D C3D HEM doub 176 n n 
C2D CMD HEM sing 177 n n 
C3D C4D HEM sing 178 n n 
C3D CAD HEM sing 179 n n 
C4D ND HEM sing 180 n n 
CMD HMD HEM sing 181 n n 
CMD HMDA HEM sing 182 n n 
CMD HMDB HEM sing 183 n n 
CAD CBD HEM sing 184 n n 
CAD HAD HEM sing 185 n n 
CAD HADA HEM sing 186 n n 
CBD CGD HEM sing 187 n n 
CBD HBD HEM sing 188 n n 
CBD HBDA HEM sing 189 n n 
CGD O1D HEM doub 190 n n 
CGD O2D HEM sing 191 n n 
O2A H2A HEM sing 192 n n 
O2D H2D HEM sing 193 n n 
FE NA HEM sing 194 n n 
FE NB HEM sing 195 n n 
FE NC HEM sing 196 n n 
FE ND HEM sing 197 n n 
#
_atom_sites.entry_id                     1HRM 
_atom_sites.fract_transf_matrix[1][1]    0.0153 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.004695 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.034602 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.029089 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 SO4 A 1 155 155 SO4 SO4 . 
C 3 HEM A 1 154 154 HEM HEM . 
D 4 HOH A 1 156 156 HOH HOH . 
D 4 HOH A 2 157 157 HOH HOH . 
D 4 HOH A 3 158 158 HOH HOH . 
D 4 HOH A 4 159 159 HOH HOH . 
D 4 HOH A 5 160 160 HOH HOH . 
D 4 HOH A 6 161 161 HOH HOH . 
D 4 HOH A 7 162 162 HOH HOH . 
D 4 HOH A 8 163 163 HOH HOH . 
D 4 HOH A 9 164 164 HOH HOH . 
D 4 HOH A 10 165 165 HOH HOH . 
D 4 HOH A 11 166 166 HOH HOH . 
D 4 HOH A 12 167 167 HOH HOH . 
D 4 HOH A 13 168 168 HOH HOH . 
D 4 HOH A 14 169 169 HOH HOH . 
D 4 HOH A 15 170 170 HOH HOH . 
D 4 HOH A 16 171 171 HOH HOH . 
D 4 HOH A 17 172 172 HOH HOH . 
D 4 HOH A 18 173 173 HOH HOH . 
D 4 HOH A 19 174 174 HOH HOH . 
D 4 HOH A 20 175 175 HOH HOH . 
D 4 HOH A 21 176 176 HOH HOH . 
D 4 HOH A 22 177 177 HOH HOH . 
D 4 HOH A 23 178 178 HOH HOH . 
D 4 HOH A 24 179 179 HOH HOH . 
D 4 HOH A 25 180 180 HOH HOH . 
D 4 HOH A 26 181 181 HOH HOH . 
D 4 HOH A 27 182 182 HOH HOH . 
D 4 HOH A 28 183 183 HOH HOH . 
D 4 HOH A 29 184 184 HOH HOH . 
D 4 HOH A 30 185 185 HOH HOH . 
D 4 HOH A 31 186 186 HOH HOH . 
D 4 HOH A 32 187 187 HOH HOH . 
D 4 HOH A 33 188 188 HOH HOH . 
D 4 HOH A 34 189 189 HOH HOH . 
D 4 HOH A 35 190 190 HOH HOH . 
D 4 HOH A 36 191 191 HOH HOH . 
D 4 HOH A 37 192 192 HOH HOH . 
D 4 HOH A 38 193 193 HOH HOH . 
D 4 HOH A 39 194 194 HOH HOH . 
D 4 HOH A 40 195 195 HOH HOH . 
D 4 HOH A 41 196 196 HOH HOH . 
D 4 HOH A 42 197 197 HOH HOH . 
D 4 HOH A 43 198 198 HOH HOH . 
D 4 HOH A 44 199 199 HOH HOH . 
D 4 HOH A 45 200 200 HOH HOH . 
D 4 HOH A 46 201 201 HOH HOH . 
D 4 HOH A 47 202 202 HOH HOH . 
D 4 HOH A 48 203 203 HOH HOH . 
D 4 HOH A 49 204 204 HOH HOH . 
D 4 HOH A 50 205 205 HOH HOH . 
D 4 HOH A 51 206 206 HOH HOH . 
D 4 HOH A 52 207 207 HOH HOH . 
D 4 HOH A 53 208 208 HOH HOH . 
D 4 HOH A 54 209 209 HOH HOH . 
D 4 HOH A 55 210 210 HOH HOH . 
D 4 HOH A 56 211 211 HOH HOH . 
D 4 HOH A 57 212 212 HOH HOH . 
D 4 HOH A 58 213 213 HOH HOH . 
D 4 HOH A 59 214 214 HOH HOH . 
D 4 HOH A 60 215 215 HOH HOH . 
D 4 HOH A 61 216 216 HOH HOH . 
D 4 HOH A 62 217 217 HOH HOH . 
D 4 HOH A 63 218 218 HOH HOH . 
D 4 HOH A 64 219 219 HOH HOH . 
D 4 HOH A 65 220 220 HOH HOH . 
D 4 HOH A 66 221 221 HOH HOH . 
D 4 HOH A 67 222 222 HOH HOH . 
D 4 HOH A 68 223 223 HOH HOH . 
D 4 HOH A 69 224 224 HOH HOH . 
D 4 HOH A 70 225 225 HOH HOH . 
D 4 HOH A 71 226 226 HOH HOH . 
D 4 HOH A 72 227 227 HOH HOH . 
D 4 HOH A 73 228 228 HOH HOH . 
D 4 HOH A 74 229 229 HOH HOH . 
D 4 HOH A 75 230 230 HOH HOH . 
D 4 HOH A 76 231 231 HOH HOH . 
D 4 HOH A 77 232 232 HOH HOH . 
D 4 HOH A 78 233 233 HOH HOH . 
D 4 HOH A 79 234 234 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CHA HEM . . . C 3 16.089 32.725 5.361 1 16.46 ? CHA HEM 154 A 1 
HETATM 2 C CHB HEM . . . C 3 14.063 29.655 8.533 1 13.8 ? CHB HEM 154 A 1 
HETATM 3 C CHC HEM . . . C 3 13.611 26.349 5.034 1 15.59 ? CHC HEM 154 A 1 
HETATM 4 C CHD HEM . . . C 3 15.38 29.424 1.814 1 16.76 ? CHD HEM 154 A 1 
HETATM 5 C C1A HEM . . . C 3 15.642 32.105 6.51 1 17.58 ? C1A HEM 154 A 1 
HETATM 6 C C2A HEM . . . C 3 15.692 32.74 7.83 1 17.58 ? C2A HEM 154 A 1 
HETATM 7 C C3A HEM . . . C 3 15.161 31.898 8.707 1 16.91 ? C3A HEM 154 A 1 
HETATM 8 C C4A HEM . . . C 3 14.717 30.728 7.978 1 16.07 ? C4A HEM 154 A 1 
HETATM 9 C CMA HEM . . . C 3 14.94 32.031 10.242 1 16.77 ? CMA HEM 154 A 1 
HETATM 10 C CAA HEM . . . C 3 16.31 34.156 8.025 1 21.51 ? CAA HEM 154 A 1 
HETATM 11 C CBA HEM . . . C 3 15.305 35.304 7.826 1 28.52 ? CBA HEM 154 A 1 
HETATM 12 C CGA HEM . . . C 3 15.807 36.63 7.311 1 31.96 ? CGA HEM 154 A 1 
HETATM 13 O O1A HEM . . . C 3 16.901 36.714 6.713 1 31.97 ? O1A HEM 154 A 1 
HETATM 14 O O2A HEM . . . C 3 15.041 37.637 7.507 1 35.67 ? O2A HEM 154 A 1 
HETATM 15 C C1B HEM . . . C 3 13.737 28.505 7.851 1 13.58 ? C1B HEM 154 A 1 
HETATM 16 C C2B HEM . . . C 3 13.169 27.337 8.445 1 13.3 ? C2B HEM 154 A 1 
HETATM 17 C C3B HEM . . . C 3 13.081 26.388 7.48 1 12.96 ? C3B HEM 154 A 1 
HETATM 18 C C4B HEM . . . C 3 13.633 26.953 6.302 1 13.11 ? C4B HEM 154 A 1 
HETATM 19 C CMB HEM . . . C 3 12.727 27.216 9.939 1 12.44 ? CMB HEM 154 A 1 
HETATM 20 C CAB HEM . . . C 3 12.479 24.993 7.605 1 14.28 ? CAB HEM 154 A 1 
HETATM 21 C CBB HEM . . . C 3 12.934 24.042 8.435 1 16.96 ? CBB HEM 154 A 1 
HETATM 22 C C1C HEM . . . C 3 14.098 26.858 3.858 1 14.66 ? C1C HEM 154 A 1 
HETATM 23 C C2C HEM . . . C 3 14.245 26.119 2.609 1 16.28 ? C2C HEM 154 A 1 
HETATM 24 C C3C HEM . . . C 3 14.776 26.973 1.705 1 17.97 ? C3C HEM 154 A 1 
HETATM 25 C C4C HEM . . . C 3 14.934 28.259 2.388 1 15.8 ? C4C HEM 154 A 1 
HETATM 26 C CMC HEM . . . C 3 13.888 24.623 2.443 1 16.58 ? CMC HEM 154 A 1 
HETATM 27 C CAC HEM . . . C 3 15.174 26.577 0.281 1 19.1 ? CAC HEM 154 A 1 
HETATM 28 C CBC HEM . . . C 3 15.386 27.15 -0.837 1 20.2 ? CBC HEM 154 A 1 
HETATM 29 C C1D HEM . . . C 3 15.678 30.598 2.515 1 17.99 ? C1D HEM 154 A 1 
HETATM 30 C C2D HEM . . . C 3 16.228 31.788 1.907 1 18.36 ? C2D HEM 154 A 1 
HETATM 31 C C3D HEM . . . C 3 16.427 32.667 2.884 1 20.06 ? C3D HEM 154 A 1 
HETATM 32 C C4D HEM . . . C 3 16.024 32.068 4.136 1 18.44 ? C4D HEM 154 A 1 
HETATM 33 C CMD HEM . . . C 3 16.54 31.9 0.399 1 18.09 ? CMD HEM 154 A 1 
HETATM 34 C CAD HEM . . . C 3 17.009 34.103 2.779 1 22.69 ? CAD HEM 154 A 1 
HETATM 35 C CBD HEM . . . C 3 18.533 34.131 3.015 1 27.4 ? CBD HEM 154 A 1 
HETATM 36 C CGD HEM . . . C 3 19.237 35.407 2.632 1 32.15 ? CGD HEM 154 A 1 
HETATM 37 O O1D HEM . . . C 3 18.638 36.287 1.91 1 33.94 ? O1D HEM 154 A 1 
HETATM 38 O O2D HEM . . . C 3 20.422 35.504 3.051 1 33.94 ? O2D HEM 154 A 1 
HETATM 39 N NA HEM . . . C 3 15.062 30.867 6.638 1 17.2 ? NA HEM 154 A 1 
HETATM 40 N NB HEM . . . C 3 13.982 28.277 6.495 1 14.31 ? NB HEM 154 A 1 
HETATM 41 N NC HEM . . . C 3 14.47 28.176 3.678 1 16.11 ? NC HEM 154 A 1 
HETATM 42 N ND HEM . . . C 3 15.534 30.797 3.894 1 17.24 ? ND HEM 154 A 1 
HETATM 43 FE FE HEM . . . C 3 14.399 29.663 5.111 1 17.13 ? FE HEM 154 A 1 
#
_model_server_stats.io_time_ms              102 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           325 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           43 
#