data_1HSG # _model_server_result.job_id 5JLGKr1W4O3pWR2zc9DDQA _model_server_result.datetime_utc '2025-01-09 18:23:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1hsg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":902}' # _entry.id 1HSG # _exptl.entry_id 1HSG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 613.789 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'N-[2(R)-HYDROXY-1(S)-INDANYL]-5-[(2(S)-TERTIARY BUTYLAMINOCARBONYL)-4(3-PYRIDYLMETHYL)PIPERAZINO]-4(S)-HYDROXY-2(R)-PHENYLMETHYLPENTANAMIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1HSG _cell.length_a 59.57 _cell.length_b 87.07 _cell.length_c 46.71 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1HSG _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C36 H47 N5 O4' _chem_comp.formula_weight 613.789 _chem_comp.id MK1 _chem_comp.mon_nstd_flag . _chem_comp.name 'N-[2(R)-HYDROXY-1(S)-INDANYL]-5-[(2(S)-TERTIARY BUTYLAMINOCARBONYL)-4(3-PYRIDYLMETHYL)PIPERAZINO]-4(S)-HYDROXY-2(R)-PHENYLMETHYLPENTANAMIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms INDINAVIR # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C1 MK1 sing 237 n n N1 C9 MK1 sing 238 n n N1 C31 MK1 sing 239 n n C1 C2 MK1 sing 240 n n C1 H11A MK1 sing 241 n n C1 H12 MK1 sing 242 n n C2 C3 MK1 sing 243 n n C2 N3 MK1 sing 244 n n C2 H2 MK1 sing 245 n n C3 O1 MK1 doub 246 n n C3 N2 MK1 sing 247 n n N2 C4 MK1 sing 248 n n N2 HN2 MK1 sing 249 n n C4 C5 MK1 sing 250 n n C4 C6 MK1 sing 251 n n C4 C7 MK1 sing 252 n n C5 H51 MK1 sing 253 n n C5 H52 MK1 sing 254 n n C5 H53 MK1 sing 255 n n C6 H61 MK1 sing 256 n n C6 H62 MK1 sing 257 n n C6 H63 MK1 sing 258 n n C7 H71 MK1 sing 259 n n C7 H72 MK1 sing 260 n n C7 H73 MK1 sing 261 n n N3 C8 MK1 sing 262 n n N3 C10 MK1 sing 263 n n C8 C9 MK1 sing 264 n n C8 H81 MK1 sing 265 n n C8 H82 MK1 sing 266 n n C9 H91 MK1 sing 267 n n C9 H92 MK1 sing 268 n n C10 C11 MK1 sing 269 n n C10 H101 MK1 sing 270 n n C10 H102 MK1 sing 271 n n C11 O2 MK1 sing 272 n n C11 C12 MK1 sing 273 n n C11 H11 MK1 sing 274 n n O2 HO2 MK1 sing 275 n n C12 C13 MK1 sing 276 n n C12 H121 MK1 sing 277 n n C12 H122 MK1 sing 278 n n C13 C14 MK1 sing 279 n n C13 C21 MK1 sing 280 n n C13 H13 MK1 sing 281 n n C14 C15 MK1 sing 282 n n C14 H141 MK1 sing 283 n n C14 H142 MK1 sing 284 n n C15 C16 MK1 doub 285 n y C15 C20 MK1 sing 286 n y C16 C17 MK1 sing 287 n y C16 H16 MK1 sing 288 n n C17 C18 MK1 doub 289 n y C17 H17 MK1 sing 290 n n C18 C19 MK1 sing 291 n y C18 H18 MK1 sing 292 n n C19 C20 MK1 doub 293 n y C19 H19 MK1 sing 294 n n C20 H20 MK1 sing 295 n n C21 O3 MK1 doub 296 n n C21 N4 MK1 sing 297 n n N4 C22 MK1 sing 298 n n N4 HN4 MK1 sing 299 n n C22 C23 MK1 sing 300 n n C22 C30 MK1 sing 301 n n C22 H22 MK1 sing 302 n n C23 O4 MK1 sing 303 n n C23 C24 MK1 sing 304 n n C23 H23 MK1 sing 305 n n O4 HO4 MK1 sing 306 n n C24 C25 MK1 sing 307 n n C24 H241 MK1 sing 308 n n C24 H242 MK1 sing 309 n n C25 C26 MK1 doub 310 n y C25 C30 MK1 sing 311 n y C26 C27 MK1 sing 312 n y C26 H26 MK1 sing 313 n n C27 C28 MK1 doub 314 n y C27 H27 MK1 sing 315 n n C28 C29 MK1 sing 316 n y C28 H28 MK1 sing 317 n n C29 C30 MK1 doub 318 n y C29 H29 MK1 sing 319 n n C31 C32 MK1 sing 320 n n C31 H311 MK1 sing 321 n n C31 H312 MK1 sing 322 n n C32 C33 MK1 sing 323 n y C32 C36 MK1 doub 324 n y C33 N5 MK1 doub 325 n y C33 H33 MK1 sing 326 n n N5 C34 MK1 sing 327 n y C34 C35 MK1 doub 328 n y C34 H34 MK1 sing 329 n n C35 C36 MK1 sing 330 n y C35 H35 MK1 sing 331 n n C36 H36 MK1 sing 332 n n # _atom_sites.entry_id 1HSG _atom_sites.fract_transf_matrix[1][1] 0.016787 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011485 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021409 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MK1 B 1 902 902 MK1 MK1 . D 3 HOH A 1 305 305 HOH HOH . D 3 HOH A 2 307 307 HOH HOH . D 3 HOH A 3 309 309 HOH HOH . D 3 HOH A 4 314 314 HOH HOH . D 3 HOH A 5 315 315 HOH HOH . D 3 HOH A 6 324 324 HOH HOH . D 3 HOH A 7 325 325 HOH HOH . D 3 HOH A 8 327 327 HOH HOH . D 3 HOH A 9 328 328 HOH HOH . D 3 HOH A 10 329 329 HOH HOH . D 3 HOH A 11 330 330 HOH HOH . D 3 HOH A 12 331 331 HOH HOH . D 3 HOH A 13 332 332 HOH HOH . D 3 HOH A 14 335 335 HOH HOH . D 3 HOH A 15 341 341 HOH HOH . D 3 HOH A 16 342 342 HOH HOH . D 3 HOH A 17 344 344 HOH HOH . D 3 HOH A 18 345 345 HOH HOH . D 3 HOH A 19 357 357 HOH HOH . D 3 HOH A 20 373 373 HOH HOH . D 3 HOH A 21 384 384 HOH HOH . D 3 HOH A 22 386 386 HOH HOH . D 3 HOH A 23 389 389 HOH HOH . D 3 HOH A 24 391 391 HOH HOH . D 3 HOH A 25 394 394 HOH HOH . D 3 HOH A 26 401 401 HOH HOH . D 3 HOH A 27 406 406 HOH HOH . D 3 HOH A 28 408 408 HOH HOH . D 3 HOH A 29 416 416 HOH HOH . D 3 HOH A 30 420 420 HOH HOH . D 3 HOH A 31 422 422 HOH HOH . D 3 HOH A 32 439 439 HOH HOH . D 3 HOH A 33 457 457 HOH HOH . D 3 HOH A 34 468 468 HOH HOH . D 3 HOH A 35 501 501 HOH HOH . D 3 HOH A 36 503 503 HOH HOH . D 3 HOH A 37 510 510 HOH HOH . D 3 HOH A 38 524 524 HOH HOH . D 3 HOH A 39 529 529 HOH HOH . D 3 HOH A 40 553 553 HOH HOH . D 3 HOH A 41 561 561 HOH HOH . D 3 HOH A 42 567 567 HOH HOH . D 3 HOH A 43 572 572 HOH HOH . D 3 HOH A 44 575 575 HOH HOH . E 3 HOH B 1 301 301 HOH HOH . E 3 HOH B 2 303 303 HOH HOH . E 3 HOH B 3 304 304 HOH HOH . E 3 HOH B 4 306 306 HOH HOH . E 3 HOH B 5 308 308 HOH HOH . E 3 HOH B 6 312 312 HOH HOH . E 3 HOH B 7 313 313 HOH HOH . E 3 HOH B 8 316 316 HOH HOH . E 3 HOH B 9 317 317 HOH HOH . E 3 HOH B 10 318 318 HOH HOH . E 3 HOH B 11 319 319 HOH HOH . E 3 HOH B 12 321 321 HOH HOH . E 3 HOH B 13 323 323 HOH HOH . E 3 HOH B 14 326 326 HOH HOH . E 3 HOH B 15 333 333 HOH HOH . E 3 HOH B 16 334 334 HOH HOH . E 3 HOH B 17 338 338 HOH HOH . E 3 HOH B 18 339 339 HOH HOH . E 3 HOH B 19 340 340 HOH HOH . E 3 HOH B 20 346 346 HOH HOH . E 3 HOH B 21 347 347 HOH HOH . E 3 HOH B 22 348 348 HOH HOH . E 3 HOH B 23 349 349 HOH HOH . E 3 HOH B 24 350 350 HOH HOH . E 3 HOH B 25 354 354 HOH HOH . E 3 HOH B 26 355 355 HOH HOH . E 3 HOH B 27 356 356 HOH HOH . E 3 HOH B 28 358 358 HOH HOH . E 3 HOH B 29 359 359 HOH HOH . E 3 HOH B 30 360 360 HOH HOH . E 3 HOH B 31 362 362 HOH HOH . E 3 HOH B 32 364 364 HOH HOH . E 3 HOH B 33 366 366 HOH HOH . E 3 HOH B 34 367 367 HOH HOH . E 3 HOH B 35 369 369 HOH HOH . E 3 HOH B 36 370 370 HOH HOH . E 3 HOH B 37 374 374 HOH HOH . E 3 HOH B 38 375 375 HOH HOH . E 3 HOH B 39 376 376 HOH HOH . E 3 HOH B 40 377 377 HOH HOH . E 3 HOH B 41 379 379 HOH HOH . E 3 HOH B 42 381 381 HOH HOH . E 3 HOH B 43 383 383 HOH HOH . E 3 HOH B 44 387 387 HOH HOH . E 3 HOH B 45 388 388 HOH HOH . E 3 HOH B 46 390 390 HOH HOH . E 3 HOH B 47 392 392 HOH HOH . E 3 HOH B 48 393 393 HOH HOH . E 3 HOH B 49 395 395 HOH HOH . E 3 HOH B 50 400 400 HOH HOH . E 3 HOH B 51 405 405 HOH HOH . E 3 HOH B 52 410 410 HOH HOH . E 3 HOH B 53 414 414 HOH HOH . E 3 HOH B 54 419 419 HOH HOH . E 3 HOH B 55 425 425 HOH HOH . E 3 HOH B 56 430 430 HOH HOH . E 3 HOH B 57 436 436 HOH HOH . E 3 HOH B 58 443 443 HOH HOH . E 3 HOH B 59 444 444 HOH HOH . E 3 HOH B 60 461 461 HOH HOH . E 3 HOH B 61 469 469 HOH HOH . E 3 HOH B 62 471 471 HOH HOH . E 3 HOH B 63 500 500 HOH HOH . E 3 HOH B 64 502 502 HOH HOH . E 3 HOH B 65 505 505 HOH HOH . E 3 HOH B 66 506 506 HOH HOH . E 3 HOH B 67 509 509 HOH HOH . E 3 HOH B 68 514 514 HOH HOH . E 3 HOH B 69 515 515 HOH HOH . E 3 HOH B 70 517 517 HOH HOH . E 3 HOH B 71 525 525 HOH HOH . E 3 HOH B 72 526 526 HOH HOH . E 3 HOH B 73 531 531 HOH HOH . E 3 HOH B 74 532 532 HOH HOH . E 3 HOH B 75 548 548 HOH HOH . E 3 HOH B 76 549 549 HOH HOH . E 3 HOH B 77 556 556 HOH HOH . E 3 HOH B 78 564 564 HOH HOH . E 3 HOH B 79 568 568 HOH HOH . E 3 HOH B 80 591 591 HOH HOH . E 3 HOH B 81 595 595 HOH HOH . E 3 HOH B 82 613 613 HOH HOH . E 3 HOH B 83 617 617 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 MK1 . . . C 2 9.28 23.763 3.004 1 28.25 ? N1 MK1 902 B 1 HETATM 2 C C1 MK1 . . . C 2 9.498 23.983 4.459 1 30.3 ? C1 MK1 902 B 1 HETATM 3 C C2 MK1 . . . C 2 10.591 24.905 4.962 1 27.27 ? C2 MK1 902 B 1 HETATM 4 C C3 MK1 . . . C 2 10.591 24.864 6.466 1 28.85 ? C3 MK1 902 B 1 HETATM 5 O O1 MK1 . . . C 2 10.937 23.849 7.057 1 29.59 ? O1 MK1 902 B 1 HETATM 6 N N2 MK1 . . . C 2 10.193 25.953 7.094 1 22.29 ? N2 MK1 902 B 1 HETATM 7 C C4 MK1 . . . C 2 10.145 26.25 8.49 1 23.47 ? C4 MK1 902 B 1 HETATM 8 C C5 MK1 . . . C 2 9.379 27.577 8.641 1 27.66 ? C5 MK1 902 B 1 HETATM 9 C C6 MK1 . . . C 2 11.398 26.347 9.074 1 21.71 ? C6 MK1 902 B 1 HETATM 10 C C7 MK1 . . . C 2 9.364 25.283 9.268 1 22.75 ? C7 MK1 902 B 1 HETATM 11 N N3 MK1 . . . C 2 11.819 24.282 4.355 1 28.91 ? N3 MK1 902 B 1 HETATM 12 C C8 MK1 . . . C 2 11.753 23.776 2.961 1 26.24 ? C8 MK1 902 B 1 HETATM 13 C C9 MK1 . . . C 2 10.44 23.182 2.493 1 27.47 ? C9 MK1 902 B 1 HETATM 14 C C10 MK1 . . . C 2 13.083 24.963 4.552 1 20.86 ? C10 MK1 902 B 1 HETATM 15 C C11 MK1 . . . C 2 14.203 24.064 5.078 1 21.68 ? C11 MK1 902 B 1 HETATM 16 O O2 MK1 . . . C 2 15.242 24.884 4.634 1 15.87 ? O2 MK1 902 B 1 HETATM 17 C C12 MK1 . . . C 2 14.44 23.761 6.569 1 21.49 ? C12 MK1 902 B 1 HETATM 18 C C13 MK1 . . . C 2 15.573 22.821 7.005 1 26.89 ? C13 MK1 902 B 1 HETATM 19 C C14 MK1 . . . C 2 15.644 22.664 8.534 1 28.67 ? C14 MK1 902 B 1 HETATM 20 C C15 MK1 . . . C 2 16.733 21.75 8.961 1 26.89 ? C15 MK1 902 B 1 HETATM 21 C C16 MK1 . . . C 2 18.058 21.916 8.553 1 29.22 ? C16 MK1 902 B 1 HETATM 22 C C17 MK1 . . . C 2 19.037 21.016 8.947 1 29.22 ? C17 MK1 902 B 1 HETATM 23 C C18 MK1 . . . C 2 18.673 19.939 9.758 1 30.97 ? C18 MK1 902 B 1 HETATM 24 C C19 MK1 . . . C 2 17.347 19.773 10.176 1 29.25 ? C19 MK1 902 B 1 HETATM 25 C C20 MK1 . . . C 2 16.374 20.687 9.772 1 29.96 ? C20 MK1 902 B 1 HETATM 26 C C21 MK1 . . . C 2 15.447 21.44 6.373 1 29.35 ? C21 MK1 902 B 1 HETATM 27 O O3 MK1 . . . C 2 14.367 20.831 6.397 1 32.66 ? O3 MK1 902 B 1 HETATM 28 N N4 MK1 . . . C 2 16.583 20.913 5.924 1 31.19 ? N4 MK1 902 B 1 HETATM 29 C C22 MK1 . . . C 2 16.692 19.5 5.604 1 29.22 ? C22 MK1 902 B 1 HETATM 30 C C23 MK1 . . . C 2 18.067 18.945 5.936 1 28.82 ? C23 MK1 902 B 1 HETATM 31 O O4 MK1 . . . C 2 19.061 19.938 5.729 1 28.32 ? O4 MK1 902 B 1 HETATM 32 C C24 MK1 . . . C 2 18.226 17.726 5.057 1 32.05 ? C24 MK1 902 B 1 HETATM 33 C C25 MK1 . . . C 2 17.476 17.904 3.76 1 31.29 ? C25 MK1 902 B 1 HETATM 34 C C26 MK1 . . . C 2 17.5 17.363 2.496 1 32 ? C26 MK1 902 B 1 HETATM 35 C C27 MK1 . . . C 2 16.613 17.872 1.541 1 28 ? C27 MK1 902 B 1 HETATM 36 C C28 MK1 . . . C 2 15.722 18.906 1.865 1 29.01 ? C28 MK1 902 B 1 HETATM 37 C C29 MK1 . . . C 2 15.683 19.479 3.129 1 27.7 ? C29 MK1 902 B 1 HETATM 38 C C30 MK1 . . . C 2 16.504 19.061 4.128 1 31.86 ? C30 MK1 902 B 1 HETATM 39 C C31 MK1 . . . C 2 8.033 23.1 2.604 1 36.25 ? C31 MK1 902 B 1 HETATM 40 C C32 MK1 . . . C 2 6.666 23.739 2.876 1 42.75 ? C32 MK1 902 B 1 HETATM 41 C C33 MK1 . . . C 2 6.158 24.808 2.124 1 47.41 ? C33 MK1 902 B 1 HETATM 42 N N5 MK1 . . . C 2 4.911 25.43 2.3 1 51.38 ? N5 MK1 902 B 1 HETATM 43 C C34 MK1 . . . C 2 4.207 24.839 3.348 1 50.6 ? C34 MK1 902 B 1 HETATM 44 C C35 MK1 . . . C 2 4.654 23.774 4.136 1 49.34 ? C35 MK1 902 B 1 HETATM 45 C C36 MK1 . . . C 2 5.905 23.211 3.897 1 44.71 ? C36 MK1 902 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 432 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 45 #