data_1HTD # _model_server_result.job_id -wtRsEzjphsWp_Zpdq7uEA _model_server_result.datetime_utc '2024-12-13 23:58:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1htd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":404}' # _entry.id 1HTD # _exptl.entry_id 1HTD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1HTD _cell.length_a 97.32 _cell.length_b 97.32 _cell.length_c 87.76 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1HTD _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 65' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 117 A CYS 117 1_555 A SG CYS 197 A CYS 197 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf2 A SG CYS 157 A CYS 157 1_555 A SG CYS 164 A CYS 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf3 B SG CYS 117 B CYS 117 1_555 B SG CYS 197 B CYS 197 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? disulf ? disulf4 B SG CYS 157 B CYS 157 1_555 B SG CYS 164 B CYS 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? metalc ? metalc1 A OE1 GLU 9 A GLU 9 1_555 D CA CA . A CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.335 ? metalc ? metalc2 A OD2 ASP 93 A ASP 93 1_555 D CA CA . A CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.482 ? metalc ? metalc3 A OD1 ASP 93 A ASP 93 1_555 D CA CA . A CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.419 ? metalc ? metalc4 A NE2 HIS 142 A HIS 142 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.008 ? metalc ? metalc5 A NE2 HIS 146 A HIS 146 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? metalc ? metalc6 A NE2 HIS 152 A HIS 152 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? metalc ? metalc7 A O CYS 197 A CYS 197 1_555 D CA CA . A CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.215 ? metalc ? metalc8 A OD1 ASN 200 A ASN 200 1_555 D CA CA . A CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.502 ? metalc ? metalc9 C ZN ZN . A ZN 401 1_555 G O HOH . A HOH 479 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.113 ? metalc ? metalc10 D CA CA . A CA 403 1_555 G O HOH . A HOH 416 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.828 ? metalc ? metalc11 D CA CA . A CA 403 1_555 G O HOH . A HOH 430 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.758 ? metalc ? metalc12 B OE1 GLU 9 B GLU 9 1_555 F CA CA . B CA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.359 ? metalc ? metalc13 B OD1 ASP 93 B ASP 93 1_555 F CA CA . B CA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.418 ? metalc ? metalc14 B OD2 ASP 93 B ASP 93 1_555 F CA CA . B CA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.538 ? metalc ? metalc15 B NE2 HIS 142 B HIS 142 1_555 E ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? metalc ? metalc16 B NE2 HIS 146 B HIS 146 1_555 E ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? metalc ? metalc17 B NE2 HIS 152 B HIS 152 1_555 E ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? metalc ? metalc18 B O CYS 197 B CYS 197 1_555 F CA CA . B CA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.255 ? metalc ? metalc19 B OD1 ASN 200 B ASN 200 1_555 F CA CA . B CA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? metalc ? metalc20 H O HOH . B HOH 302 1_555 E ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.084 ? metalc ? metalc21 H O HOH . B HOH 349 1_555 F CA CA . B CA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.786 ? metalc ? metalc22 H O HOH . B HOH 357 1_555 F CA CA . B CA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.725 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1HTD _atom_sites.fract_transf_matrix[1][1] 0.010275 _atom_sites.fract_transf_matrix[1][2] 0.005932 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011865 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011395 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 401 401 ZN ZN . D 3 CA A 1 403 403 CA CA . E 2 ZN B 1 402 402 ZN ZN . F 3 CA B 1 404 404 CA CA . G 4 HOH A 1 404 303 HOH HOH . G 4 HOH A 2 405 304 HOH HOH . G 4 HOH A 3 406 305 HOH HOH . G 4 HOH A 4 407 306 HOH HOH . G 4 HOH A 5 408 307 HOH HOH . G 4 HOH A 6 409 308 HOH HOH . G 4 HOH A 7 410 309 HOH HOH . G 4 HOH A 8 411 310 HOH HOH . G 4 HOH A 9 412 311 HOH HOH . G 4 HOH A 10 413 312 HOH HOH . G 4 HOH A 11 414 313 HOH HOH . G 4 HOH A 12 415 314 HOH HOH . G 4 HOH A 13 416 315 HOH HOH . G 4 HOH A 14 417 316 HOH HOH . G 4 HOH A 15 418 317 HOH HOH . G 4 HOH A 16 419 318 HOH HOH . G 4 HOH A 17 420 319 HOH HOH . G 4 HOH A 18 421 322 HOH HOH . G 4 HOH A 19 422 334 HOH HOH . G 4 HOH A 20 423 341 HOH HOH . G 4 HOH A 21 424 344 HOH HOH . G 4 HOH A 22 425 347 HOH HOH . G 4 HOH A 23 426 348 HOH HOH . G 4 HOH A 24 427 350 HOH HOH . G 4 HOH A 25 428 353 HOH HOH . G 4 HOH A 26 429 354 HOH HOH . G 4 HOH A 27 430 355 HOH HOH . G 4 HOH A 28 431 360 HOH HOH . G 4 HOH A 29 432 361 HOH HOH . G 4 HOH A 30 433 362 HOH HOH . G 4 HOH A 31 434 365 HOH HOH . G 4 HOH A 32 435 366 HOH HOH . G 4 HOH A 33 436 367 HOH HOH . G 4 HOH A 34 437 368 HOH HOH . G 4 HOH A 35 438 372 HOH HOH . G 4 HOH A 36 439 374 HOH HOH . G 4 HOH A 37 440 378 HOH HOH . G 4 HOH A 38 441 379 HOH HOH . G 4 HOH A 39 442 380 HOH HOH . G 4 HOH A 40 443 386 HOH HOH . G 4 HOH A 41 444 387 HOH HOH . G 4 HOH A 42 445 388 HOH HOH . G 4 HOH A 43 446 390 HOH HOH . G 4 HOH A 44 447 391 HOH HOH . G 4 HOH A 45 448 396 HOH HOH . G 4 HOH A 46 449 398 HOH HOH . G 4 HOH A 47 450 399 HOH HOH . G 4 HOH A 48 451 400 HOH HOH . G 4 HOH A 49 452 401 HOH HOH . G 4 HOH A 50 453 402 HOH HOH . G 4 HOH A 51 454 404 HOH HOH . G 4 HOH A 52 455 409 HOH HOH . G 4 HOH A 53 456 414 HOH HOH . G 4 HOH A 54 457 415 HOH HOH . G 4 HOH A 55 458 416 HOH HOH . G 4 HOH A 56 459 418 HOH HOH . G 4 HOH A 57 460 419 HOH HOH . G 4 HOH A 58 461 420 HOH HOH . G 4 HOH A 59 462 421 HOH HOH . G 4 HOH A 60 463 422 HOH HOH . G 4 HOH A 61 464 423 HOH HOH . G 4 HOH A 62 465 424 HOH HOH . G 4 HOH A 63 466 425 HOH HOH . G 4 HOH A 64 467 426 HOH HOH . G 4 HOH A 65 468 427 HOH HOH . G 4 HOH A 66 469 432 HOH HOH . G 4 HOH A 67 470 435 HOH HOH . G 4 HOH A 68 471 436 HOH HOH . G 4 HOH A 69 472 438 HOH HOH . G 4 HOH A 70 473 441 HOH HOH . G 4 HOH A 71 474 442 HOH HOH . G 4 HOH A 72 475 443 HOH HOH . G 4 HOH A 73 476 444 HOH HOH . G 4 HOH A 74 477 446 HOH HOH . G 4 HOH A 75 478 447 HOH HOH . G 4 HOH A 76 479 301 HOH HOH . G 4 HOH A 77 480 451 HOH HOH . H 4 HOH B 1 302 302 HOH HOH . H 4 HOH B 2 320 320 HOH HOH . H 4 HOH B 3 321 321 HOH HOH . H 4 HOH B 4 323 323 HOH HOH . H 4 HOH B 5 324 324 HOH HOH . H 4 HOH B 6 325 325 HOH HOH . H 4 HOH B 7 326 326 HOH HOH . H 4 HOH B 8 327 327 HOH HOH . H 4 HOH B 9 328 328 HOH HOH . H 4 HOH B 10 329 329 HOH HOH . H 4 HOH B 11 330 330 HOH HOH . H 4 HOH B 12 331 331 HOH HOH . H 4 HOH B 13 332 332 HOH HOH . H 4 HOH B 14 333 333 HOH HOH . H 4 HOH B 15 335 335 HOH HOH . H 4 HOH B 16 336 336 HOH HOH . H 4 HOH B 17 337 337 HOH HOH . H 4 HOH B 18 338 338 HOH HOH . H 4 HOH B 19 339 339 HOH HOH . H 4 HOH B 20 340 340 HOH HOH . H 4 HOH B 21 342 342 HOH HOH . H 4 HOH B 22 343 343 HOH HOH . H 4 HOH B 23 345 345 HOH HOH . H 4 HOH B 24 346 346 HOH HOH . H 4 HOH B 25 349 349 HOH HOH . H 4 HOH B 26 351 351 HOH HOH . H 4 HOH B 27 352 352 HOH HOH . H 4 HOH B 28 356 356 HOH HOH . H 4 HOH B 29 357 357 HOH HOH . H 4 HOH B 30 358 358 HOH HOH . H 4 HOH B 31 359 359 HOH HOH . H 4 HOH B 32 363 363 HOH HOH . H 4 HOH B 33 364 364 HOH HOH . H 4 HOH B 34 369 369 HOH HOH . H 4 HOH B 35 370 370 HOH HOH . H 4 HOH B 36 371 371 HOH HOH . H 4 HOH B 37 375 375 HOH HOH . H 4 HOH B 38 376 376 HOH HOH . H 4 HOH B 39 377 377 HOH HOH . H 4 HOH B 40 381 381 HOH HOH . H 4 HOH B 41 382 382 HOH HOH . H 4 HOH B 42 383 383 HOH HOH . H 4 HOH B 43 384 384 HOH HOH . H 4 HOH B 44 385 385 HOH HOH . H 4 HOH B 45 389 389 HOH HOH . H 4 HOH B 46 392 392 HOH HOH . H 4 HOH B 47 393 393 HOH HOH . H 4 HOH B 48 394 394 HOH HOH . H 4 HOH B 49 395 395 HOH HOH . H 4 HOH B 50 397 397 HOH HOH . H 4 HOH B 51 403 403 HOH HOH . H 4 HOH B 52 405 405 HOH HOH . H 4 HOH B 53 406 406 HOH HOH . H 4 HOH B 54 407 407 HOH HOH . H 4 HOH B 55 408 408 HOH HOH . H 4 HOH B 56 410 410 HOH HOH . H 4 HOH B 57 411 411 HOH HOH . H 4 HOH B 58 412 412 HOH HOH . H 4 HOH B 59 413 413 HOH HOH . H 4 HOH B 60 417 417 HOH HOH . H 4 HOH B 61 428 428 HOH HOH . H 4 HOH B 62 429 429 HOH HOH . H 4 HOH B 63 430 430 HOH HOH . H 4 HOH B 64 431 431 HOH HOH . H 4 HOH B 65 433 433 HOH HOH . H 4 HOH B 66 434 434 HOH HOH . H 4 HOH B 67 437 437 HOH HOH . H 4 HOH B 68 439 439 HOH HOH . H 4 HOH B 69 440 440 HOH HOH . H 4 HOH B 70 445 445 HOH HOH . H 4 HOH B 71 448 448 HOH HOH . H 4 HOH B 72 449 449 HOH HOH . H 4 HOH B 73 450 450 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 3 _atom_site.Cartn_x -5.551 _atom_site.Cartn_y 48.58 _atom_site.Cartn_z 36.003 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 24.11 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 404 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 101 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 291 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #