data_1HW4 # _model_server_result.job_id 4c_dfLi5KCJrpBRt-DyCxg _model_server_result.datetime_utc '2024-11-23 21:23:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1hw4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":314}' # _entry.id 1HW4 # _exptl.entry_id 1HW4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1HW4 _cell.length_a 95.68 _cell.length_b 95.68 _cell.length_c 82.998 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1HW4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_555 x-y,-y,-z+2/3 1 0 0 0 -1 0 0 0 -1 0 0 55.332 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ARG 84 A ARG 42 1_555 A N CME 85 A CME 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale2 A C CME 85 A CME 43 1_555 A N GLY 86 A GLY 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale3 A C MET 221 A MET 179 1_555 A N CME 222 A CME 180 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale4 A C CME 222 A CME 180 1_555 A N ALA 223 A ALA 181 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale5 A C LEU 240 A LEU 198 1_555 A N CME 241 A CME 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale6 A C CME 241 A CME 199 1_555 A N GLN 242 A GLN 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 104 n n C1 C2 EDO sing 105 n n C1 H11 EDO sing 106 n n C1 H12 EDO sing 107 n n O1 HO1 EDO sing 108 n n C2 O2 EDO sing 109 n n C2 H21 EDO sing 110 n n C2 H22 EDO sing 111 n n O2 HO2 EDO sing 112 n n # _atom_sites.entry_id 1HW4 _atom_sites.fract_transf_matrix[1][1] 0.010452 _atom_sites.fract_transf_matrix[1][2] 0.006034 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012068 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012048 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 315 315 SO4 SO4 . C 2 SO4 A 1 316 316 SO4 SO4 . D 2 SO4 A 1 317 317 SO4 SO4 . E 3 EDO A 1 314 314 EDO EDO . F 4 HOH A 1 318 1 HOH HOH . F 4 HOH A 2 319 2 HOH HOH . F 4 HOH A 3 320 3 HOH HOH . F 4 HOH A 4 321 4 HOH HOH . F 4 HOH A 5 322 5 HOH HOH . F 4 HOH A 6 323 6 HOH HOH . F 4 HOH A 7 324 7 HOH HOH . F 4 HOH A 8 325 8 HOH HOH . F 4 HOH A 9 326 9 HOH HOH . F 4 HOH A 10 327 10 HOH HOH . F 4 HOH A 11 328 11 HOH HOH . F 4 HOH A 12 329 12 HOH HOH . F 4 HOH A 13 330 13 HOH HOH . F 4 HOH A 14 331 14 HOH HOH . F 4 HOH A 15 332 15 HOH HOH . F 4 HOH A 16 333 16 HOH HOH . F 4 HOH A 17 334 17 HOH HOH . F 4 HOH A 18 335 18 HOH HOH . F 4 HOH A 19 336 19 HOH HOH . F 4 HOH A 20 337 20 HOH HOH . F 4 HOH A 21 338 21 HOH HOH . F 4 HOH A 22 339 22 HOH HOH . F 4 HOH A 23 340 23 HOH HOH . F 4 HOH A 24 341 24 HOH HOH . F 4 HOH A 25 342 25 HOH HOH . F 4 HOH A 26 343 26 HOH HOH . F 4 HOH A 27 344 27 HOH HOH . F 4 HOH A 28 345 28 HOH HOH . F 4 HOH A 29 346 29 HOH HOH . F 4 HOH A 30 347 30 HOH HOH . F 4 HOH A 31 348 31 HOH HOH . F 4 HOH A 32 349 32 HOH HOH . F 4 HOH A 33 350 33 HOH HOH . F 4 HOH A 34 351 34 HOH HOH . F 4 HOH A 35 352 35 HOH HOH . F 4 HOH A 36 353 36 HOH HOH . F 4 HOH A 37 354 37 HOH HOH . F 4 HOH A 38 355 38 HOH HOH . F 4 HOH A 39 356 39 HOH HOH . F 4 HOH A 40 357 40 HOH HOH . F 4 HOH A 41 358 41 HOH HOH . F 4 HOH A 42 359 42 HOH HOH . F 4 HOH A 43 360 43 HOH HOH . F 4 HOH A 44 361 44 HOH HOH . F 4 HOH A 45 362 45 HOH HOH . F 4 HOH A 46 363 46 HOH HOH . F 4 HOH A 47 364 47 HOH HOH . F 4 HOH A 48 365 48 HOH HOH . F 4 HOH A 49 366 49 HOH HOH . F 4 HOH A 50 367 50 HOH HOH . F 4 HOH A 51 368 51 HOH HOH . F 4 HOH A 52 369 52 HOH HOH . F 4 HOH A 53 370 53 HOH HOH . F 4 HOH A 54 371 54 HOH HOH . F 4 HOH A 55 372 55 HOH HOH . F 4 HOH A 56 373 56 HOH HOH . F 4 HOH A 57 374 57 HOH HOH . F 4 HOH A 58 375 58 HOH HOH . F 4 HOH A 59 376 59 HOH HOH . F 4 HOH A 60 377 60 HOH HOH . F 4 HOH A 61 378 61 HOH HOH . F 4 HOH A 62 379 62 HOH HOH . F 4 HOH A 63 380 63 HOH HOH . F 4 HOH A 64 381 64 HOH HOH . F 4 HOH A 65 382 65 HOH HOH . F 4 HOH A 66 383 66 HOH HOH . F 4 HOH A 67 384 67 HOH HOH . F 4 HOH A 68 385 68 HOH HOH . F 4 HOH A 69 386 69 HOH HOH . F 4 HOH A 70 387 70 HOH HOH . F 4 HOH A 71 388 71 HOH HOH . F 4 HOH A 72 389 72 HOH HOH . F 4 HOH A 73 390 73 HOH HOH . F 4 HOH A 74 391 74 HOH HOH . F 4 HOH A 75 392 75 HOH HOH . F 4 HOH A 76 393 76 HOH HOH . F 4 HOH A 77 394 77 HOH HOH . F 4 HOH A 78 395 78 HOH HOH . F 4 HOH A 79 396 79 HOH HOH . F 4 HOH A 80 397 80 HOH HOH . F 4 HOH A 81 398 81 HOH HOH . F 4 HOH A 82 399 82 HOH HOH . F 4 HOH A 83 400 83 HOH HOH . F 4 HOH A 84 401 84 HOH HOH . F 4 HOH A 85 402 85 HOH HOH . F 4 HOH A 86 403 86 HOH HOH . F 4 HOH A 87 404 87 HOH HOH . F 4 HOH A 88 405 88 HOH HOH . F 4 HOH A 89 406 89 HOH HOH . F 4 HOH A 90 407 90 HOH HOH . F 4 HOH A 91 408 91 HOH HOH . F 4 HOH A 92 409 92 HOH HOH . F 4 HOH A 93 410 93 HOH HOH . F 4 HOH A 94 411 94 HOH HOH . F 4 HOH A 95 412 95 HOH HOH . F 4 HOH A 96 413 96 HOH HOH . F 4 HOH A 97 414 97 HOH HOH . F 4 HOH A 98 415 98 HOH HOH . F 4 HOH A 99 416 99 HOH HOH . F 4 HOH A 100 417 100 HOH HOH . F 4 HOH A 101 418 101 HOH HOH . F 4 HOH A 102 419 102 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . E 3 38.956 -6.885 31.288 1 22.92 ? C1 EDO 314 A 1 HETATM 2 O O1 EDO . . . E 3 37.902 -5.785 31.438 1 23.74 ? O1 EDO 314 A 1 HETATM 3 C C2 EDO . . . E 3 38.782 -8.064 32.258 1 23.27 ? C2 EDO 314 A 1 HETATM 4 O O2 EDO . . . E 3 38.689 -7.499 33.724 1 22.04 ? O2 EDO 314 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 395 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 4 #