data_1HWR # _model_server_result.job_id efi4bqV6whUUV0WU6NBQoQ _model_server_result.datetime_utc '2025-03-06 00:53:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1hwr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":216}' # _entry.id 1HWR # _exptl.entry_id 1HWR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 406.517 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[4-R-(4-ALPHA,6-BETA,7-BETA]-HEXAHYDRO-5,6-DI(HYDROXY)-1,3-DI(ALLYL)-4,7-BISPHENYLMETHYL)-2H-1,3-DIAZEPINONE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1HWR _cell.length_a 62.9 _cell.length_b 62.9 _cell.length_c 83.5 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1HWR _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 61' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C25 H30 N2 O3' _chem_comp.formula_weight 406.517 _chem_comp.id 216 _chem_comp.mon_nstd_flag . _chem_comp.name '[4-R-(4-ALPHA,6-BETA,7-BETA]-HEXAHYDRO-5,6-DI(HYDROXY)-1,3-DI(ALLYL)-4,7-BISPHENYLMETHYL)-2H-1,3-DIAZEPINONE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms XK216 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 216 doub 1 n n O4 C4 216 sing 2 n n O4 HO4 216 sing 3 n n O5 C5 216 sing 4 n n O5 HO5 216 sing 5 n n N2 C1 216 sing 6 n n N2 C3 216 sing 7 n n N2 C21 216 sing 8 n n N7 C1 216 sing 9 n n N7 C6 216 sing 10 n n N7 C71 216 sing 11 n n C3 C4 216 sing 12 n n C3 C31 216 sing 13 n n C3 H3 216 sing 14 n n C4 C5 216 sing 15 n n C4 H4 216 sing 16 n n C5 C6 216 sing 17 n n C5 H5 216 sing 18 n n C6 C61 216 sing 19 n n C6 H6 216 sing 20 n n C21 C22 216 sing 21 n n C21 H211 216 sing 22 n n C21 H212 216 sing 23 n n C22 C23 216 doub 24 n n C22 H22 216 sing 25 n n C23 H231 216 sing 26 n n C23 H232 216 sing 27 n n C31 C32 216 sing 28 n n C31 H311 216 sing 29 n n C31 H312 216 sing 30 n n C32 C33 216 doub 31 n y C32 C37 216 sing 32 n y C33 C34 216 sing 33 n y C33 H33 216 sing 34 n n C34 C35 216 doub 35 n y C34 H34 216 sing 36 n n C35 C36 216 sing 37 n y C35 H35 216 sing 38 n n C36 C37 216 doub 39 n y C36 H36 216 sing 40 n n C37 H37 216 sing 41 n n C61 C62 216 sing 42 n n C61 H611 216 sing 43 n n C61 H612 216 sing 44 n n C62 C63 216 doub 45 n y C62 C67 216 sing 46 n y C63 C64 216 sing 47 n y C63 H63 216 sing 48 n n C64 C65 216 doub 49 n y C64 H64 216 sing 50 n n C65 C66 216 sing 51 n y C65 H65 216 sing 52 n n C66 C67 216 doub 53 n y C66 H66 216 sing 54 n n C67 H67 216 sing 55 n n C71 C72 216 sing 56 n n C71 H711 216 sing 57 n n C71 H712 216 sing 58 n n C72 C73 216 doub 59 n n C72 H72 216 sing 60 n n C73 H731 216 sing 61 n n C73 H732 216 sing 62 n n # _atom_sites.entry_id 1HWR _atom_sites.fract_transf_matrix[1][1] 0.015898 _atom_sites.fract_transf_matrix[1][2] 0.009179 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018358 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011976 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id C _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id 216 _pdbx_nonpoly_scheme.pdb_strand_id B _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 216 _pdbx_nonpoly_scheme.auth_seq_num 216 _pdbx_nonpoly_scheme.pdb_mon_id 216 _pdbx_nonpoly_scheme.auth_mon_id 216 _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 216 . . . C 2 -8.028 14.281 27.778 1 15.57 ? O1 216 216 B 1 HETATM 2 O O4 216 . . . C 2 -10.121 19.342 26.766 1 16.4 ? O4 216 216 B 1 HETATM 3 O O5 216 . . . C 2 -11.789 18.383 28.879 1 20.28 ? O5 216 216 B 1 HETATM 4 N N2 216 . . . C 2 -8.652 16.065 26.776 1 18.4 ? N2 216 216 B 1 HETATM 5 N N7 216 . . . C 2 -9.427 15.568 28.938 1 15.38 ? N7 216 216 B 1 HETATM 6 C C1 216 . . . C 2 -8.7 15.284 27.837 1 15.43 ? C1 216 216 B 1 HETATM 7 C C3 216 . . . C 2 -8.828 17.522 26.824 1 15.89 ? C3 216 216 B 1 HETATM 8 C C4 216 . . . C 2 -10.204 18.017 27.139 1 14.81 ? C4 216 216 B 1 HETATM 9 C C5 216 . . . C 2 -10.543 17.831 28.573 1 15.55 ? C5 216 216 B 1 HETATM 10 C C6 216 . . . C 2 -10.677 16.359 28.92 1 18.79 ? C6 216 216 B 1 HETATM 11 C C21 216 . . . C 2 -8.243 15.476 25.499 1 16.1 ? C21 216 216 B 1 HETATM 12 C C22 216 . . . C 2 -9.185 15.862 24.384 1 15.27 ? C22 216 216 B 1 HETATM 13 C C23 216 . . . C 2 -8.749 16.38 23.231 1 20.37 ? C23 216 216 B 1 HETATM 14 C C31 216 . . . C 2 -7.684 18.183 27.609 1 17.22 ? C31 216 216 B 1 HETATM 15 C C32 216 . . . C 2 -6.36 17.98 26.928 1 17.8 ? C32 216 216 B 1 HETATM 16 C C33 216 . . . C 2 -5.552 16.872 27.27 1 18.73 ? C33 216 216 B 1 HETATM 17 C C34 216 . . . C 2 -4.3 16.671 26.647 1 20.13 ? C34 216 216 B 1 HETATM 18 C C35 216 . . . C 2 -3.848 17.57 25.668 1 14.13 ? C35 216 216 B 1 HETATM 19 C C36 216 . . . C 2 -4.668 18.686 25.317 1 18.27 ? C36 216 216 B 1 HETATM 20 C C37 216 . . . C 2 -5.927 18.898 25.945 1 16.6 ? C37 216 216 B 1 HETATM 21 C C61 216 . . . C 2 -11.787 15.554 28.175 1 19.27 ? C61 216 216 B 1 HETATM 22 C C62 216 . . . C 2 -12.391 14.392 28.953 1 20.3 ? C62 216 216 B 1 HETATM 23 C C63 216 . . . C 2 -13.279 14.688 30.016 1 15.64 ? C63 216 216 B 1 HETATM 24 C C64 216 . . . C 2 -13.912 13.663 30.738 1 14.31 ? C64 216 216 B 1 HETATM 25 C C65 216 . . . C 2 -13.638 12.326 30.371 1 19.49 ? C65 216 216 B 1 HETATM 26 C C66 216 . . . C 2 -12.75 12.018 29.306 1 19.3 ? C66 216 216 B 1 HETATM 27 C C67 216 . . . C 2 -12.11 13.051 28.585 1 18.55 ? C67 216 216 B 1 HETATM 28 C C71 216 . . . C 2 -9.119 15.018 30.272 1 18.02 ? C71 216 216 B 1 HETATM 29 C C72 216 . . . C 2 -9.007 16.063 31.37 1 17.88 ? C72 216 216 B 1 HETATM 30 C C73 216 . . . C 2 -9.448 15.876 32.62 1 16.54 ? C73 216 216 B 1 # _model_server_stats.io_time_ms 56 _model_server_stats.parse_time_ms 33 _model_server_stats.create_model_time_ms 44 _model_server_stats.query_time_ms 271 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 30 #