data_1HXE # _model_server_result.job_id mRlExjbo8h86LAzj2-jSlQ _model_server_result.datetime_utc '2024-12-27 00:26:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1hxe # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":550}' # _entry.id 1HXE # _exptl.entry_id 1HXE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 85.468 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'RUBIDIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 101 _cell.angle_gamma 90 _cell.entry_id 1HXE _cell.length_a 71.5 _cell.length_b 72.3 _cell.length_c 73.3 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1HXE _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 9 L CYS 1 1_555 B SG CYS 119 H CYS 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.009 ? disulf ? disulf2 B SG CYS 28 H CYS 42 1_555 B SG CYS 44 H CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf3 B SG CYS 173 H CYS 168 1_555 B SG CYS 187 H CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf4 B SG CYS 201 H CYS 191 1_555 B SG CYS 231 H CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? metalc ? metalc1 B O LYS 174 H LYS 169 1_555 E RB RB . H RB 551 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.924 ? metalc ? metalc2 B O THR 177 H THR 172 1_555 E RB RB . H RB 551 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.862 ? metalc ? metalc3 B O TYR 190 H TYR 184 1_555 D RB RB . H RB 550 1_555 A ? ? ? ? ? ? ? ? ? ? ? 3.56 ? metalc ? metalc4 B O PHE 215 H PHE 204 4_546 E RB RB . H RB 551 1_555 A ? ? ? ? ? ? ? ? ? ? ? 2.654 ? metalc ? metalc5 B O ARG 233 H ARG 221 1_555 D RB RB . H RB 550 1_555 A ? ? ? ? ? ? ? ? ? ? ? 2.934 ? metalc ? metalc6 B O LYS 236 H LYS 224 1_555 D RB RB . H RB 550 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.703 ? metalc ? metalc7 G O HOH . H HOH 469 1_555 D RB RB . H RB 550 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.528 ? metalc ? metalc8 G O HOH . H HOH 519 1_555 D RB RB . H RB 550 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.137 ? metalc ? metalc9 G O HOH . H HOH 520 1_555 D RB RB . H RB 550 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.084 ? metalc ? metalc10 G O HOH . H HOH 537 1_555 D RB RB . H RB 550 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.04 ? metalc ? metalc11 G O HOH . H HOH 538 1_555 D RB RB . H RB 550 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.257 ? metalc ? metalc12 G O HOH . H HOH 540 1_555 E RB RB . H RB 551 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.65 ? metalc ? metalc13 G O HOH . H HOH 541 1_555 E RB RB . H RB 551 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.359 ? metalc ? metalc14 G O HOH . H HOH 542 1_555 E RB RB . H RB 551 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.996 ? # _chem_comp.formula 'Rb 1' _chem_comp.formula_weight 85.468 _chem_comp.id RB _chem_comp.mon_nstd_flag . _chem_comp.name 'RUBIDIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1HXE _atom_sites.fract_transf_matrix[1][1] 0.013986 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002719 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013831 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013898 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 RB H 1 550 550 RB RB . E 4 RB H 1 551 551 RB RB . F 5 HOH L 1 406 406 HOH HOH . F 5 HOH L 2 409 409 HOH HOH . F 5 HOH L 3 416 416 HOH HOH . F 5 HOH L 4 420 420 HOH HOH . F 5 HOH L 5 430 430 HOH HOH . F 5 HOH L 6 435 435 HOH HOH . F 5 HOH L 7 483 483 HOH HOH . F 5 HOH L 8 525 525 HOH HOH . F 5 HOH L 9 526 526 HOH HOH . G 5 HOH H 1 402 402 HOH HOH . G 5 HOH H 2 403 403 HOH HOH . G 5 HOH H 3 404 404 HOH HOH . G 5 HOH H 4 405 405 HOH HOH . G 5 HOH H 5 407 407 HOH HOH . G 5 HOH H 6 408 408 HOH HOH . G 5 HOH H 7 410 410 HOH HOH . G 5 HOH H 8 411 411 HOH HOH . G 5 HOH H 9 412 412 HOH HOH . G 5 HOH H 10 413 413 HOH HOH . G 5 HOH H 11 414 414 HOH HOH . G 5 HOH H 12 415 415 HOH HOH . G 5 HOH H 13 417 417 HOH HOH . G 5 HOH H 14 418 418 HOH HOH . G 5 HOH H 15 419 419 HOH HOH . G 5 HOH H 16 421 421 HOH HOH . G 5 HOH H 17 422 422 HOH HOH . G 5 HOH H 18 423 423 HOH HOH . G 5 HOH H 19 425 425 HOH HOH . G 5 HOH H 20 426 426 HOH HOH . G 5 HOH H 21 428 428 HOH HOH . G 5 HOH H 22 429 429 HOH HOH . G 5 HOH H 23 431 431 HOH HOH . G 5 HOH H 24 432 432 HOH HOH . G 5 HOH H 25 433 433 HOH HOH . G 5 HOH H 26 434 434 HOH HOH . G 5 HOH H 27 436 436 HOH HOH . G 5 HOH H 28 437 437 HOH HOH . G 5 HOH H 29 438 438 HOH HOH . G 5 HOH H 30 439 439 HOH HOH . G 5 HOH H 31 440 440 HOH HOH . G 5 HOH H 32 441 441 HOH HOH . G 5 HOH H 33 442 442 HOH HOH . G 5 HOH H 34 443 443 HOH HOH . G 5 HOH H 35 444 444 HOH HOH . G 5 HOH H 36 445 445 HOH HOH . G 5 HOH H 37 446 446 HOH HOH . G 5 HOH H 38 447 447 HOH HOH . G 5 HOH H 39 448 448 HOH HOH . G 5 HOH H 40 449 449 HOH HOH . G 5 HOH H 41 450 450 HOH HOH . G 5 HOH H 42 451 451 HOH HOH . G 5 HOH H 43 452 452 HOH HOH . G 5 HOH H 44 453 453 HOH HOH . G 5 HOH H 45 454 454 HOH HOH . G 5 HOH H 46 455 455 HOH HOH . G 5 HOH H 47 457 457 HOH HOH . G 5 HOH H 48 458 458 HOH HOH . G 5 HOH H 49 459 459 HOH HOH . G 5 HOH H 50 460 460 HOH HOH . G 5 HOH H 51 463 463 HOH HOH . G 5 HOH H 52 464 464 HOH HOH . G 5 HOH H 53 465 465 HOH HOH . G 5 HOH H 54 466 466 HOH HOH . G 5 HOH H 55 467 467 HOH HOH . G 5 HOH H 56 468 468 HOH HOH . G 5 HOH H 57 469 469 HOH HOH . G 5 HOH H 58 474 474 HOH HOH . G 5 HOH H 59 475 475 HOH HOH . G 5 HOH H 60 476 476 HOH HOH . G 5 HOH H 61 477 477 HOH HOH . G 5 HOH H 62 478 478 HOH HOH . G 5 HOH H 63 479 479 HOH HOH . G 5 HOH H 64 482 482 HOH HOH . G 5 HOH H 65 484 484 HOH HOH . G 5 HOH H 66 486 486 HOH HOH . G 5 HOH H 67 487 487 HOH HOH . G 5 HOH H 68 488 488 HOH HOH . G 5 HOH H 69 489 489 HOH HOH . G 5 HOH H 70 490 490 HOH HOH . G 5 HOH H 71 491 491 HOH HOH . G 5 HOH H 72 492 492 HOH HOH . G 5 HOH H 73 493 493 HOH HOH . G 5 HOH H 74 494 494 HOH HOH . G 5 HOH H 75 495 495 HOH HOH . G 5 HOH H 76 496 496 HOH HOH . G 5 HOH H 77 498 498 HOH HOH . G 5 HOH H 78 499 499 HOH HOH . G 5 HOH H 79 501 501 HOH HOH . G 5 HOH H 80 503 503 HOH HOH . G 5 HOH H 81 504 504 HOH HOH . G 5 HOH H 82 505 505 HOH HOH . G 5 HOH H 83 507 507 HOH HOH . G 5 HOH H 84 508 508 HOH HOH . G 5 HOH H 85 509 509 HOH HOH . G 5 HOH H 86 510 510 HOH HOH . G 5 HOH H 87 512 512 HOH HOH . G 5 HOH H 88 513 513 HOH HOH . G 5 HOH H 89 514 514 HOH HOH . G 5 HOH H 90 515 515 HOH HOH . G 5 HOH H 91 516 516 HOH HOH . G 5 HOH H 92 517 517 HOH HOH . G 5 HOH H 93 518 518 HOH HOH . G 5 HOH H 94 519 519 HOH HOH . G 5 HOH H 95 520 520 HOH HOH . G 5 HOH H 96 521 521 HOH HOH . G 5 HOH H 97 522 522 HOH HOH . G 5 HOH H 98 523 523 HOH HOH . G 5 HOH H 99 524 524 HOH HOH . G 5 HOH H 100 527 527 HOH HOH . G 5 HOH H 101 528 528 HOH HOH . G 5 HOH H 102 529 529 HOH HOH . G 5 HOH H 103 530 530 HOH HOH . G 5 HOH H 104 531 531 HOH HOH . G 5 HOH H 105 533 533 HOH HOH . G 5 HOH H 106 534 534 HOH HOH . G 5 HOH H 107 535 535 HOH HOH . G 5 HOH H 108 536 536 HOH HOH . G 5 HOH H 109 537 537 HOH HOH . G 5 HOH H 110 538 538 HOH HOH . G 5 HOH H 111 539 539 HOH HOH . G 5 HOH H 112 540 540 HOH HOH . G 5 HOH H 113 541 541 HOH HOH . G 5 HOH H 114 542 542 HOH HOH . H 5 HOH I 1 456 456 HOH HOH . H 5 HOH I 2 497 497 HOH HOH . H 5 HOH I 3 500 500 HOH HOH . H 5 HOH I 4 502 502 HOH HOH . H 5 HOH I 5 506 506 HOH HOH . H 5 HOH I 6 511 511 HOH HOH . H 5 HOH I 7 532 532 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol RB _atom_site.label_atom_id RB _atom_site.label_comp_id RB _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x 5.485 _atom_site.Cartn_y -13.315 _atom_site.Cartn_z 31 _atom_site.occupancy 0.52 _atom_site.B_iso_or_equiv 41.45 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id RB _atom_site.auth_comp_id RB _atom_site.auth_seq_id 550 _atom_site.auth_asym_id H _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 54 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 19 _model_server_stats.element_count 1 #