data_1HYV # _model_server_result.job_id VZ1AVyqmmvaL0KSqmkrXHQ _model_server_result.datetime_utc '2024-10-14 01:20:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1hyv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":304}' # _entry.id 1HYV # _exptl.entry_id 1HYV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 383.337 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description TETRAPHENYL-ARSONIUM _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1HYV _cell.length_a 72.01 _cell.length_b 72.01 _cell.length_c 65.6 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1HYV _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 y,x,-z -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ASP 18 A ASP 64 1_555 A N CAF 19 A CAF 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.354 ? covale ? covale2 A C CAF 19 A CAF 65 1_555 A N THR 20 A THR 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.282 ? covale ? covale3 A C ALA 83 A ALA 129 1_555 A N CAF 84 A CAF 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.375 ? covale ? covale4 A C CAF 84 A CAF 130 1_555 A N TRP 85 A TRP 131 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.302 ? # _chem_comp.formula 'C24 H20 As 1' _chem_comp.formula_weight 383.337 _chem_comp.id TTA _chem_comp.mon_nstd_flag . _chem_comp.name TETRAPHENYL-ARSONIUM _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1HYV _atom_sites.fract_transf_matrix[1][1] 0.01389 _atom_sites.fract_transf_matrix[1][2] 0.00802 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01604 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01524 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 302 302 SO4 SUL . C 3 CL A 1 303 303 CL IUM . D 4 TTA A 1 304 1 TTA TAC . E 5 HOH A 1 305 1 HOH WAT . E 5 HOH A 2 306 2 HOH WAT . E 5 HOH A 3 307 3 HOH WAT . E 5 HOH A 4 308 4 HOH WAT . E 5 HOH A 5 309 5 HOH WAT . E 5 HOH A 6 310 6 HOH WAT . E 5 HOH A 7 311 7 HOH WAT . E 5 HOH A 8 312 8 HOH WAT . E 5 HOH A 9 313 9 HOH WAT . E 5 HOH A 10 314 10 HOH WAT . E 5 HOH A 11 315 11 HOH WAT . E 5 HOH A 12 316 12 HOH WAT . E 5 HOH A 13 317 13 HOH WAT . E 5 HOH A 14 318 14 HOH WAT . E 5 HOH A 15 319 15 HOH WAT . E 5 HOH A 16 320 16 HOH WAT . E 5 HOH A 17 321 17 HOH WAT . E 5 HOH A 18 322 18 HOH WAT . E 5 HOH A 19 323 19 HOH WAT . E 5 HOH A 20 324 20 HOH WAT . E 5 HOH A 21 325 21 HOH WAT . E 5 HOH A 22 326 22 HOH WAT . E 5 HOH A 23 327 23 HOH WAT . E 5 HOH A 24 328 24 HOH WAT . E 5 HOH A 25 329 25 HOH WAT . E 5 HOH A 26 330 26 HOH WAT . E 5 HOH A 27 331 27 HOH WAT . E 5 HOH A 28 332 28 HOH WAT . E 5 HOH A 29 333 29 HOH WAT . E 5 HOH A 30 334 30 HOH WAT . E 5 HOH A 31 335 31 HOH WAT . E 5 HOH A 32 336 32 HOH WAT . E 5 HOH A 33 337 33 HOH WAT . E 5 HOH A 34 338 34 HOH WAT . E 5 HOH A 35 339 35 HOH WAT . E 5 HOH A 36 340 36 HOH WAT . E 5 HOH A 37 341 37 HOH WAT . E 5 HOH A 38 342 38 HOH WAT . E 5 HOH A 39 343 39 HOH WAT . E 5 HOH A 40 344 40 HOH WAT . E 5 HOH A 41 345 41 HOH WAT . E 5 HOH A 42 346 42 HOH WAT . E 5 HOH A 43 347 43 HOH WAT . E 5 HOH A 44 348 44 HOH WAT . E 5 HOH A 45 349 45 HOH WAT . E 5 HOH A 46 350 46 HOH WAT . E 5 HOH A 47 351 47 HOH WAT . E 5 HOH A 48 352 48 HOH WAT . E 5 HOH A 49 353 49 HOH WAT . E 5 HOH A 50 354 50 HOH WAT . E 5 HOH A 51 355 51 HOH WAT . E 5 HOH A 52 356 52 HOH WAT . E 5 HOH A 53 357 53 HOH WAT . E 5 HOH A 54 358 54 HOH WAT . E 5 HOH A 55 359 55 HOH WAT . E 5 HOH A 56 360 56 HOH WAT . E 5 HOH A 57 361 57 HOH WAT . E 5 HOH A 58 362 58 HOH WAT . E 5 HOH A 59 363 59 HOH WAT . E 5 HOH A 60 364 60 HOH WAT . E 5 HOH A 61 365 61 HOH WAT . E 5 HOH A 62 366 62 HOH WAT . E 5 HOH A 63 367 63 HOH WAT . E 5 HOH A 64 368 64 HOH WAT . E 5 HOH A 65 369 65 HOH WAT . E 5 HOH A 66 370 66 HOH WAT . E 5 HOH A 67 371 67 HOH WAT . E 5 HOH A 68 372 68 HOH WAT . E 5 HOH A 69 373 69 HOH WAT . E 5 HOH A 70 374 70 HOH WAT . E 5 HOH A 71 375 71 HOH WAT . E 5 HOH A 72 376 72 HOH WAT . E 5 HOH A 73 377 73 HOH WAT . E 5 HOH A 74 378 74 HOH WAT . E 5 HOH A 75 379 75 HOH WAT . E 5 HOH A 76 380 76 HOH WAT . E 5 HOH A 77 381 77 HOH WAT . E 5 HOH A 78 382 78 HOH WAT . E 5 HOH A 79 383 79 HOH WAT . E 5 HOH A 80 384 80 HOH WAT . E 5 HOH A 81 385 81 HOH WAT . E 5 HOH A 82 386 82 HOH WAT . E 5 HOH A 83 387 83 HOH WAT . E 5 HOH A 84 388 84 HOH WAT . E 5 HOH A 85 389 85 HOH WAT . E 5 HOH A 86 390 86 HOH WAT . E 5 HOH A 87 391 87 HOH WAT . E 5 HOH A 88 392 88 HOH WAT . E 5 HOH A 89 393 89 HOH WAT . E 5 HOH A 90 394 90 HOH WAT . E 5 HOH A 91 395 91 HOH WAT . E 5 HOH A 92 396 92 HOH WAT . E 5 HOH A 93 397 93 HOH WAT . E 5 HOH A 94 398 94 HOH WAT . E 5 HOH A 95 399 95 HOH WAT . E 5 HOH A 96 400 96 HOH WAT . E 5 HOH A 97 401 97 HOH WAT . E 5 HOH A 98 402 98 HOH WAT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 AS AS TTA . . . D 4 6.327 46.127 -10.786 1 79.37 ? AS TTA 304 A 1 HETATM 2 C C1 TTA . . . D 4 5.569 44.869 -12.019 1 79.31 ? C1 TTA 304 A 1 HETATM 3 C C2 TTA . . . D 4 5.701 43.481 -11.925 1 78.55 ? C2 TTA 304 A 1 HETATM 4 C C3 TTA . . . D 4 5.066 42.685 -12.886 1 78.92 ? C3 TTA 304 A 1 HETATM 5 C C4 TTA . . . D 4 4.308 43.263 -13.866 1 78.82 ? C4 TTA 304 A 1 HETATM 6 C C5 TTA . . . D 4 4.139 44.655 -13.98 1 79.22 ? C5 TTA 304 A 1 HETATM 7 C C6 TTA . . . D 4 4.774 45.528 -13.017 1 79.11 ? C6 TTA 304 A 1 HETATM 8 C C7 TTA . . . D 4 4.902 46.872 -9.816 1 80.51 ? C7 TTA 304 A 1 HETATM 9 C C8 TTA . . . D 4 4.97 47.313 -8.448 1 80.98 ? C8 TTA 304 A 1 HETATM 10 C C9 TTA . . . D 4 3.851 47.831 -7.804 1 81.32 ? C9 TTA 304 A 1 HETATM 11 C C10 TTA . . . D 4 2.615 47.891 -8.534 1 81.42 ? C10 TTA 304 A 1 HETATM 12 C C11 TTA . . . D 4 2.543 47.424 -9.91 1 81.31 ? C11 TTA 304 A 1 HETATM 13 C C12 TTA . . . D 4 3.66 46.911 -10.554 1 80.86 ? C12 TTA 304 A 1 HETATM 14 C C13 TTA . . . D 4 7.43 47.192 -11.894 1 79.49 ? C13 TTA 304 A 1 HETATM 15 C C14 TTA . . . D 4 8.413 48.108 -11.288 1 79.01 ? C14 TTA 304 A 1 HETATM 16 C C15 TTA . . . D 4 9.346 48.79 -12.212 1 78.91 ? C15 TTA 304 A 1 HETATM 17 C C16 TTA . . . D 4 9.301 48.47 -13.624 1 78.95 ? C16 TTA 304 A 1 HETATM 18 C C17 TTA . . . D 4 8.424 47.512 -14.191 1 79.09 ? C17 TTA 304 A 1 HETATM 19 C C18 TTA . . . D 4 7.524 46.843 -13.323 1 79.19 ? C18 TTA 304 A 1 HETATM 20 C C19 TTA . . . D 4 7.486 45.333 -9.472 1 80.37 ? C19 TTA 304 A 1 HETATM 21 C C20 TTA . . . D 4 6.952 45.114 -8.183 1 81.01 ? C20 TTA 304 A 1 HETATM 22 C C21 TTA . . . D 4 7.862 44.534 -7.25 1 81.05 ? C21 TTA 304 A 1 HETATM 23 C C22 TTA . . . D 4 9.126 44.236 -7.595 1 80.83 ? C22 TTA 304 A 1 HETATM 24 C C23 TTA . . . D 4 9.707 44.461 -8.898 1 80.85 ? C23 TTA 304 A 1 HETATM 25 C C24 TTA . . . D 4 8.788 45.061 -9.894 1 80.17 ? C24 TTA 304 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 292 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 25 #