data_1HYZ # _model_server_result.job_id 3BjghBv1nYluoEk1r7HaFg _model_server_result.datetime_utc '2024-11-22 08:42:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1hyz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":304}' # _entry.id 1HYZ # _exptl.entry_id 1HYZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 415.336 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (3,4-DIHYDROXY-PHENYL)-TRIPHENYL-ARSONIUM _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1HYZ _cell.length_a 72.22 _cell.length_b 72.22 _cell.length_c 65.16 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1HYZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 y,x,-z -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ASP 18 A ASP 64 1_555 A N CAF 19 A CAF 65 1_555 ? A ? ? A ? ? ? ? ? ? ? 1.331 ? covale ? covale2 A C ASP 18 A ASP 64 1_555 A N CAF 19 A CAF 65 1_555 ? B ? ? B ? ? ? ? ? ? ? 1.331 ? covale ? covale3 A C CAF 19 A CAF 65 1_555 A N THR 20 A THR 66 1_555 ? A ? ? A ? ? ? ? ? ? ? 1.322 ? covale ? covale4 A C CAF 19 A CAF 65 1_555 A N THR 20 A THR 66 1_555 ? B ? ? B ? ? ? ? ? ? ? 1.321 ? covale ? covale5 A C ALA 83 A ALA 129 1_555 A N CAF 84 A CAF 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.345 ? covale ? covale6 A C CAF 84 A CAF 130 1_555 A N TRP 85 A TRP 131 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.31 ? metalc ? metalc1 A AS CAF 19 A CAF 65 1_555 A NE2 HIS 21 A HIS 67 1_555 ? B ? ? B ? ? ? ? ? ? ? 2.454 ? # _chem_comp.formula 'C24 H20 As O2 1' _chem_comp.formula_weight 415.336 _chem_comp.id TTO _chem_comp.mon_nstd_flag . _chem_comp.name (3,4-DIHYDROXY-PHENYL)-TRIPHENYL-ARSONIUM _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag AS C1 TTO sing 360 n n AS C7 TTO sing 361 n n AS C13 TTO sing 362 n n AS C19 TTO sing 363 n n C1 C2 TTO doub 364 n y C1 C6 TTO sing 365 n y C2 C3 TTO sing 366 n y C2 HC2 TTO sing 367 n n C3 C4 TTO doub 368 n y C3 HC3 TTO sing 369 n n C4 C5 TTO sing 370 n y C4 HC4 TTO sing 371 n n C5 C6 TTO doub 372 n y C5 HC5 TTO sing 373 n n C6 HC6 TTO sing 374 n n C7 C8 TTO doub 375 n y C7 C12 TTO sing 376 n y C8 C9 TTO sing 377 n y C8 HC8 TTO sing 378 n n C9 C10 TTO doub 379 n y C9 HC9 TTO sing 380 n n C10 C11 TTO sing 381 n y C10 H10 TTO sing 382 n n C11 C12 TTO doub 383 n y C11 H11 TTO sing 384 n n C12 H12 TTO sing 385 n n C13 C14 TTO doub 386 n y C13 C18 TTO sing 387 n y C14 C15 TTO sing 388 n y C14 H14 TTO sing 389 n n C15 C16 TTO doub 390 n y C15 H15 TTO sing 391 n n C16 C17 TTO sing 392 n y C16 H16 TTO sing 393 n n C17 C18 TTO doub 394 n y C17 H17 TTO sing 395 n n C18 H18 TTO sing 396 n n C19 C20 TTO doub 397 n y C19 C24 TTO sing 398 n y C20 C21 TTO sing 399 n y C20 H20 TTO sing 400 n n C21 C22 TTO doub 401 n y C21 O1 TTO sing 402 n n C22 C23 TTO sing 403 n y C22 O2 TTO sing 404 n n C23 C24 TTO doub 405 n y C23 H23 TTO sing 406 n n C24 H24 TTO sing 407 n n O1 HO1 TTO sing 408 n n O2 HO2 TTO sing 409 n n # _atom_sites.entry_id 1HYZ _atom_sites.fract_transf_matrix[1][1] 0.01385 _atom_sites.fract_transf_matrix[1][2] 0.00799 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01599 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01535 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 302 302 SO4 SUL . C 3 CL A 1 303 303 CL IUM . D 4 TTO A 1 304 1 TTO TAC . E 5 HOH A 1 305 1 HOH WAT . E 5 HOH A 2 306 2 HOH WAT . E 5 HOH A 3 307 3 HOH WAT . E 5 HOH A 4 308 4 HOH WAT . E 5 HOH A 5 309 5 HOH WAT . E 5 HOH A 6 310 6 HOH WAT . E 5 HOH A 7 311 7 HOH WAT . E 5 HOH A 8 312 8 HOH WAT . E 5 HOH A 9 313 9 HOH WAT . E 5 HOH A 10 314 10 HOH WAT . E 5 HOH A 11 315 11 HOH WAT . E 5 HOH A 12 316 12 HOH WAT . E 5 HOH A 13 317 13 HOH WAT . E 5 HOH A 14 318 14 HOH WAT . E 5 HOH A 15 319 15 HOH WAT . E 5 HOH A 16 320 16 HOH WAT . E 5 HOH A 17 321 17 HOH WAT . E 5 HOH A 18 322 18 HOH WAT . E 5 HOH A 19 323 19 HOH WAT . E 5 HOH A 20 324 20 HOH WAT . E 5 HOH A 21 325 21 HOH WAT . E 5 HOH A 22 326 22 HOH WAT . E 5 HOH A 23 327 23 HOH WAT . E 5 HOH A 24 328 24 HOH WAT . E 5 HOH A 25 329 25 HOH WAT . E 5 HOH A 26 330 26 HOH WAT . E 5 HOH A 27 331 27 HOH WAT . E 5 HOH A 28 332 28 HOH WAT . E 5 HOH A 29 333 29 HOH WAT . E 5 HOH A 30 334 30 HOH WAT . E 5 HOH A 31 335 31 HOH WAT . E 5 HOH A 32 336 32 HOH WAT . E 5 HOH A 33 337 33 HOH WAT . E 5 HOH A 34 338 34 HOH WAT . E 5 HOH A 35 339 35 HOH WAT . E 5 HOH A 36 340 36 HOH WAT . E 5 HOH A 37 341 37 HOH WAT . E 5 HOH A 38 342 38 HOH WAT . E 5 HOH A 39 343 39 HOH WAT . E 5 HOH A 40 344 40 HOH WAT . E 5 HOH A 41 345 41 HOH WAT . E 5 HOH A 42 346 42 HOH WAT . E 5 HOH A 43 347 43 HOH WAT . E 5 HOH A 44 348 44 HOH WAT . E 5 HOH A 45 349 45 HOH WAT . E 5 HOH A 46 350 46 HOH WAT . E 5 HOH A 47 351 47 HOH WAT . E 5 HOH A 48 352 48 HOH WAT . E 5 HOH A 49 353 49 HOH WAT . E 5 HOH A 50 354 50 HOH WAT . E 5 HOH A 51 355 51 HOH WAT . E 5 HOH A 52 356 52 HOH WAT . E 5 HOH A 53 357 53 HOH WAT . E 5 HOH A 54 358 54 HOH WAT . E 5 HOH A 55 359 55 HOH WAT . E 5 HOH A 56 360 56 HOH WAT . E 5 HOH A 57 361 57 HOH WAT . E 5 HOH A 58 362 58 HOH WAT . E 5 HOH A 59 363 59 HOH WAT . E 5 HOH A 60 364 60 HOH WAT . E 5 HOH A 61 365 61 HOH WAT . E 5 HOH A 62 366 62 HOH WAT . E 5 HOH A 63 367 63 HOH WAT . E 5 HOH A 64 368 64 HOH WAT . E 5 HOH A 65 369 65 HOH WAT . E 5 HOH A 66 370 66 HOH WAT . E 5 HOH A 67 371 67 HOH WAT . E 5 HOH A 68 372 68 HOH WAT . E 5 HOH A 69 373 69 HOH WAT . E 5 HOH A 70 374 70 HOH WAT . E 5 HOH A 71 375 71 HOH WAT . E 5 HOH A 72 376 72 HOH WAT . E 5 HOH A 73 377 73 HOH WAT . E 5 HOH A 74 378 74 HOH WAT . E 5 HOH A 75 379 75 HOH WAT . E 5 HOH A 76 380 76 HOH WAT . E 5 HOH A 77 381 77 HOH WAT . E 5 HOH A 78 382 78 HOH WAT . E 5 HOH A 79 383 79 HOH WAT . E 5 HOH A 80 384 80 HOH WAT . E 5 HOH A 81 385 81 HOH WAT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 AS AS TTO . . . D 4 6.332 46.102 -10.652 0.5 79.65 ? AS TTO 304 A 1 HETATM 2 C C1 TTO . . . D 4 5.469 44.979 -11.923 0.5 79.44 ? C1 TTO 304 A 1 HETATM 3 C C2 TTO . . . D 4 5.525 43.578 -11.753 0.5 81.3 ? C2 TTO 304 A 1 HETATM 4 C C3 TTO . . . D 4 4.844 42.855 -12.699 0.5 82.24 ? C3 TTO 304 A 1 HETATM 5 C C4 TTO . . . D 4 4.186 43.385 -13.761 0.5 79.58 ? C4 TTO 304 A 1 HETATM 6 C C5 TTO . . . D 4 4.119 44.776 -13.962 0.5 82.12 ? C5 TTO 304 A 1 HETATM 7 C C6 TTO . . . D 4 4.786 45.625 -12.993 0.5 81.58 ? C6 TTO 304 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 7 #