data_1I06 # _model_server_result.job_id dLHpWrrJ58kIacxyrNpIow _model_server_result.datetime_utc '2024-11-05 19:43:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1i06 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 1I06 # _exptl.entry_id 1I06 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 112.411 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CADMIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1I06 _cell.length_a 57.033 _cell.length_b 57.033 _cell.length_c 108.976 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1I06 _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE1 GLU 36 A GLU 36 1_555 C CD CD . A CD 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.757 ? metalc ? metalc2 A OE2 GLU 36 A GLU 36 1_555 C CD CD . A CD 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.553 ? metalc ? metalc3 A OE2 GLU 61 A GLU 61 1_555 E CD CD . A CD 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.734 ? metalc ? metalc4 A OE1 GLU 61 A GLU 61 1_555 E CD CD . A CD 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.553 ? metalc ? metalc5 A OD2 ASP 79 A ASP 79 1_555 D CD CD . A CD 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.119 ? metalc ? metalc6 A OD1 ASP 79 A ASP 79 1_555 D CD CD . A CD 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.643 ? metalc ? metalc7 A OE1 GLU 80 A GLU 80 3_544 B CD CD . A CD 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.531 ? metalc ? metalc8 A OE2 GLU 80 A GLU 80 3_544 B CD CD . A CD 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.514 ? metalc ? metalc9 A OE1 GLU 84 A GLU 84 1_555 E CD CD . A CD 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.683 ? metalc ? metalc10 A NE2 HIS 122 A HIS 122 1_555 B CD CD . A CD 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.454 ? metalc ? metalc11 A OE1 GLU 126 A GLU 126 4_555 D CD CD . A CD 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.904 ? metalc ? metalc12 A OE2 GLU 126 A GLU 126 4_555 D CD CD . A CD 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.828 ? metalc ? metalc13 A NE2 GLN 133 A GLN 133 1_555 B CD CD . A CD 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.457 ? metalc ? metalc14 A OE1 GLU 157 A GLU 157 5_555 C CD CD . A CD 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.46 ? metalc ? metalc15 A OE2 GLU 157 A GLU 157 5_555 C CD CD . A CD 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.602 ? metalc ? metalc16 A ND1 HIS 159 A HIS 159 1_555 B CD CD . A CD 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.456 ? metalc ? metalc17 B CD CD . A CD 401 1_555 G O HOH . A HOH 514 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.566 ? metalc ? metalc18 C CD CD . A CD 402 1_555 G O HOH . A HOH 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.12 ? metalc ? metalc19 C CD CD . A CD 402 1_555 G O HOH . A HOH 520 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.653 ? metalc ? metalc20 C CD CD . A CD 402 1_555 G O HOH . A HOH 529 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.63 ? metalc ? metalc21 D CD CD . A CD 403 1_555 G O HOH . A HOH 537 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.733 ? # _chem_comp.formula 'Cd 2' _chem_comp.formula_weight 112.411 _chem_comp.id CD _chem_comp.mon_nstd_flag . _chem_comp.name 'CADMIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1I06 _atom_sites.fract_transf_matrix[1][1] 0.017534 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017534 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009176 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CD A 1 401 401 CD CD2 . C 2 CD A 1 402 402 CD CD2 . D 2 CD A 1 403 403 CD CD2 . E 2 CD A 1 404 404 CD CD2 . F 3 TZL A 1 405 1 TZL TZL . G 4 HOH A 1 500 500 HOH WAT . G 4 HOH A 2 502 502 HOH WAT . G 4 HOH A 3 503 503 HOH WAT . G 4 HOH A 4 504 504 HOH WAT . G 4 HOH A 5 505 505 HOH WAT . G 4 HOH A 6 506 506 HOH WAT . G 4 HOH A 7 507 507 HOH WAT . G 4 HOH A 8 508 508 HOH WAT . G 4 HOH A 9 509 509 HOH WAT . G 4 HOH A 10 510 510 HOH WAT . G 4 HOH A 11 511 511 HOH WAT . G 4 HOH A 12 512 512 HOH WAT . G 4 HOH A 13 513 513 HOH WAT . G 4 HOH A 14 514 514 HOH WAT . G 4 HOH A 15 515 515 HOH WAT . G 4 HOH A 16 516 516 HOH WAT . G 4 HOH A 17 517 517 HOH WAT . G 4 HOH A 18 518 518 HOH WAT . G 4 HOH A 19 519 519 HOH WAT . G 4 HOH A 20 520 520 HOH WAT . G 4 HOH A 21 521 521 HOH WAT . G 4 HOH A 22 522 522 HOH WAT . G 4 HOH A 23 523 523 HOH WAT . G 4 HOH A 24 524 524 HOH WAT . G 4 HOH A 25 525 525 HOH WAT . G 4 HOH A 26 526 526 HOH WAT . G 4 HOH A 27 527 527 HOH WAT . G 4 HOH A 28 528 528 HOH WAT . G 4 HOH A 29 529 529 HOH WAT . G 4 HOH A 30 530 530 HOH WAT . G 4 HOH A 31 531 531 HOH WAT . G 4 HOH A 32 532 532 HOH WAT . G 4 HOH A 33 533 533 HOH WAT . G 4 HOH A 34 534 534 HOH WAT . G 4 HOH A 35 535 535 HOH WAT . G 4 HOH A 36 536 536 HOH WAT . G 4 HOH A 37 537 537 HOH WAT . G 4 HOH A 38 538 538 HOH WAT . G 4 HOH A 39 539 539 HOH WAT . G 4 HOH A 40 540 540 HOH WAT . G 4 HOH A 41 541 541 HOH WAT . G 4 HOH A 42 542 542 HOH WAT . G 4 HOH A 43 543 543 HOH WAT . G 4 HOH A 44 544 544 HOH WAT . G 4 HOH A 45 545 545 HOH WAT . G 4 HOH A 46 546 546 HOH WAT . G 4 HOH A 47 547 547 HOH WAT . G 4 HOH A 48 548 548 HOH WAT . G 4 HOH A 49 549 549 HOH WAT . G 4 HOH A 50 550 550 HOH WAT . G 4 HOH A 51 551 551 HOH WAT . G 4 HOH A 52 552 552 HOH WAT . G 4 HOH A 53 553 553 HOH WAT . G 4 HOH A 54 554 554 HOH WAT . G 4 HOH A 55 555 555 HOH WAT . G 4 HOH A 56 556 556 HOH WAT . G 4 HOH A 57 557 557 HOH WAT . G 4 HOH A 58 558 558 HOH WAT . G 4 HOH A 59 559 559 HOH WAT . G 4 HOH A 60 560 560 HOH WAT . G 4 HOH A 61 561 561 HOH WAT . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CD _atom_site.label_atom_id CD _atom_site.label_comp_id CD _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 15.472 _atom_site.Cartn_y 6.877 _atom_site.Cartn_z 24.553 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 22.83 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CD _atom_site.auth_comp_id CD _atom_site.auth_seq_id 401 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 211 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #