data_1I13 # _model_server_result.job_id JkgPgJiYnunF_NLMJWIylw _model_server_result.datetime_utc '2024-11-07 14:50:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1i13 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":902}' # _entry.id 1I13 # _exptl.entry_id 1I13 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 94.11 _cell.angle_gamma 90 _cell.entry_id 1I13 _cell.length_a 39.45 _cell.length_b 102.25 _cell.length_c 52 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1I13 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 G N N ? 2 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 171 A ASP 171 1_555 D MG MG . A MG 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? metalc ? metalc2 F O3 PRP . A PRP 801 1_555 C MG MG . A MG 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.283 ? metalc ? metalc3 F O1 PRP . A PRP 801 1_555 C MG MG . A MG 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.594 ? metalc ? metalc4 F O2 PRP . A PRP 801 1_555 C MG MG . A MG 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.281 ? metalc ? metalc5 F O3B PRP . A PRP 801 1_555 C MG MG . A MG 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.268 ? metalc ? metalc6 F O1B PRP . A PRP 801 1_555 D MG MG . A MG 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? metalc ? metalc7 F O2A PRP . A PRP 801 1_555 D MG MG . A MG 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.117 ? metalc ? metalc8 C MG MG . A MG 900 1_555 L O HOH . A HOH 5502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.077 ? metalc ? metalc9 C MG MG . A MG 900 1_555 L O HOH . A HOH 5503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.164 ? metalc ? metalc10 D MG MG . A MG 902 1_555 L O HOH . A HOH 5504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? metalc ? metalc11 D MG MG . A MG 902 1_555 L O HOH . A HOH 5505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.103 ? metalc ? metalc12 D MG MG . A MG 902 1_555 L O HOH . A HOH 5506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? metalc ? metalc13 B OD1 ASP 171 B ASP 171 1_555 G MG MG . B MG 912 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.198 ? metalc ? metalc14 J O3 PRP . B PRP 811 1_555 H MG MG . B MG 910 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.13 ? metalc ? metalc15 J O2 PRP . B PRP 811 1_555 H MG MG . B MG 910 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.129 ? metalc ? metalc16 J O3B PRP . B PRP 811 1_555 H MG MG . B MG 910 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.107 ? metalc ? metalc17 J O1 PRP . B PRP 811 1_555 H MG MG . B MG 910 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.356 ? metalc ? metalc18 J O2A PRP . B PRP 811 1_555 G MG MG . B MG 912 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? metalc ? metalc19 J O1B PRP . B PRP 811 1_555 G MG MG . B MG 912 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.232 ? metalc ? metalc20 H MG MG . B MG 910 1_555 M O HOH . B HOH 5510 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.086 ? metalc ? metalc21 H MG MG . B MG 910 1_555 M O HOH . B HOH 5511 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? metalc ? metalc22 G MG MG . B MG 912 1_555 M O HOH . B HOH 5507 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.116 ? metalc ? metalc23 G MG MG . B MG 912 1_555 M O HOH . B HOH 5508 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? metalc ? metalc24 G MG MG . B MG 912 1_555 M O HOH . B HOH 5509 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1I13 _atom_sites.fract_transf_matrix[1][1] 0.025349 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001821 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00978 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01928 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG A 1 900 900 MG MO2 . D 2 MG A 1 902 902 MG MO3 . E 3 7HP A 1 800 800 7HP 7HP . F 4 PRP A 1 801 801 PRP PRP . G 2 MG B 1 912 912 MG MO3 . H 2 MG B 1 910 910 MG MO2 . I 3 7HP B 1 810 810 7HP 7HP . J 4 PRP B 1 811 811 PRP PRP . K 5 FMT B 1 479 479 FMT FMT . L 6 HOH A 1 1000 1000 HOH HOH . L 6 HOH A 2 1001 1001 HOH HOH . L 6 HOH A 3 1002 1002 HOH HOH . L 6 HOH A 4 1003 1003 HOH HOH . L 6 HOH A 5 1005 1005 HOH HOH . L 6 HOH A 6 1006 1006 HOH HOH . L 6 HOH A 7 1007 1007 HOH HOH . L 6 HOH A 8 1008 1008 HOH HOH . L 6 HOH A 9 1009 1009 HOH HOH . L 6 HOH A 10 1010 1010 HOH HOH . L 6 HOH A 11 1011 1011 HOH HOH . L 6 HOH A 12 1012 1012 HOH HOH . L 6 HOH A 13 1014 1014 HOH HOH . L 6 HOH A 14 1015 1015 HOH HOH . L 6 HOH A 15 1016 1016 HOH HOH . L 6 HOH A 16 1018 1018 HOH HOH . L 6 HOH A 17 1019 1019 HOH HOH . L 6 HOH A 18 1021 1021 HOH HOH . L 6 HOH A 19 1022 1022 HOH HOH . L 6 HOH A 20 1023 1023 HOH HOH . L 6 HOH A 21 1024 1024 HOH HOH . L 6 HOH A 22 1025 1025 HOH HOH . L 6 HOH A 23 1026 1026 HOH HOH . L 6 HOH A 24 1027 1027 HOH HOH . L 6 HOH A 25 1029 1029 HOH HOH . L 6 HOH A 26 1030 1030 HOH HOH . L 6 HOH A 27 1031 1031 HOH HOH . L 6 HOH A 28 1032 1032 HOH HOH . L 6 HOH A 29 1034 1034 HOH HOH . L 6 HOH A 30 1035 1035 HOH HOH . L 6 HOH A 31 1036 1036 HOH HOH . L 6 HOH A 32 1037 1037 HOH HOH . L 6 HOH A 33 1038 1038 HOH HOH . L 6 HOH A 34 1039 1039 HOH HOH . L 6 HOH A 35 1040 1040 HOH HOH . L 6 HOH A 36 1041 1041 HOH HOH . L 6 HOH A 37 1042 1042 HOH HOH . L 6 HOH A 38 1043 1043 HOH HOH . L 6 HOH A 39 1044 1044 HOH HOH . L 6 HOH A 40 1045 1045 HOH HOH . L 6 HOH A 41 1046 1046 HOH HOH . L 6 HOH A 42 1047 1047 HOH HOH . L 6 HOH A 43 1048 1048 HOH HOH . L 6 HOH A 44 1051 1051 HOH HOH . L 6 HOH A 45 1052 1052 HOH HOH . L 6 HOH A 46 1054 1054 HOH HOH . L 6 HOH A 47 1055 1055 HOH HOH . L 6 HOH A 48 1057 1057 HOH HOH . L 6 HOH A 49 1088 1088 HOH HOH . L 6 HOH A 50 3000 3000 HOH HOH . L 6 HOH A 51 3001 3001 HOH HOH . L 6 HOH A 52 3002 3002 HOH HOH . L 6 HOH A 53 3004 3004 HOH HOH . L 6 HOH A 54 3005 3005 HOH HOH . L 6 HOH A 55 3006 3006 HOH HOH . L 6 HOH A 56 3008 3008 HOH HOH . L 6 HOH A 57 3009 3009 HOH HOH . L 6 HOH A 58 3010 3010 HOH HOH . L 6 HOH A 59 3011 3011 HOH HOH . L 6 HOH A 60 3012 3012 HOH HOH . L 6 HOH A 61 3013 3013 HOH HOH . L 6 HOH A 62 3014 3014 HOH HOH . L 6 HOH A 63 3015 3015 HOH HOH . L 6 HOH A 64 3017 3017 HOH HOH . L 6 HOH A 65 3018 3018 HOH HOH . L 6 HOH A 66 3019 3019 HOH HOH . L 6 HOH A 67 3020 3020 HOH HOH . L 6 HOH A 68 4001 4001 HOH HOH . L 6 HOH A 69 4002 4002 HOH HOH . L 6 HOH A 70 4004 4004 HOH HOH . L 6 HOH A 71 4005 4005 HOH HOH . L 6 HOH A 72 4006 4006 HOH HOH . L 6 HOH A 73 4007 4007 HOH HOH . L 6 HOH A 74 4008 4008 HOH HOH . L 6 HOH A 75 4009 4009 HOH HOH . L 6 HOH A 76 4010 4010 HOH HOH . L 6 HOH A 77 4011 4011 HOH HOH . L 6 HOH A 78 4016 4016 HOH HOH . L 6 HOH A 79 5000 5000 HOH HOH . L 6 HOH A 80 5001 5001 HOH HOH . L 6 HOH A 81 5003 5003 HOH HOH . L 6 HOH A 82 5004 5004 HOH HOH . L 6 HOH A 83 5005 5005 HOH HOH . L 6 HOH A 84 5006 5006 HOH HOH . L 6 HOH A 85 5007 5007 HOH HOH . L 6 HOH A 86 5008 5008 HOH HOH . L 6 HOH A 87 5010 5010 HOH HOH . L 6 HOH A 88 5200 5200 HOH HOH . L 6 HOH A 89 5502 900 HOH MO2 . L 6 HOH A 90 5503 900 HOH MO2 . L 6 HOH A 91 5504 902 HOH MO3 . L 6 HOH A 92 5505 902 HOH MO3 . L 6 HOH A 93 5506 902 HOH MO3 . M 6 HOH B 1 1017 1017 HOH HOH . M 6 HOH B 2 1020 1020 HOH HOH . M 6 HOH B 3 1050 1050 HOH HOH . M 6 HOH B 4 1058 1058 HOH HOH . M 6 HOH B 5 1059 1059 HOH HOH . M 6 HOH B 6 1061 1061 HOH HOH . M 6 HOH B 7 1062 1062 HOH HOH . M 6 HOH B 8 1063 1063 HOH HOH . M 6 HOH B 9 1064 1064 HOH HOH . M 6 HOH B 10 1065 1065 HOH HOH . M 6 HOH B 11 1067 1067 HOH HOH . M 6 HOH B 12 1068 1068 HOH HOH . M 6 HOH B 13 1069 1069 HOH HOH . M 6 HOH B 14 1070 1070 HOH HOH . M 6 HOH B 15 1071 1071 HOH HOH . M 6 HOH B 16 1072 1072 HOH HOH . M 6 HOH B 17 1073 1073 HOH HOH . M 6 HOH B 18 1074 1074 HOH HOH . M 6 HOH B 19 1075 1075 HOH HOH . M 6 HOH B 20 1076 1076 HOH HOH . M 6 HOH B 21 1077 1077 HOH HOH . M 6 HOH B 22 1078 1078 HOH HOH . M 6 HOH B 23 1079 1079 HOH HOH . M 6 HOH B 24 1080 1080 HOH HOH . M 6 HOH B 25 1081 1081 HOH HOH . M 6 HOH B 26 1082 1082 HOH HOH . M 6 HOH B 27 1083 1083 HOH HOH . M 6 HOH B 28 1084 1084 HOH HOH . M 6 HOH B 29 1085 1085 HOH HOH . M 6 HOH B 30 1086 1086 HOH HOH . M 6 HOH B 31 1087 1087 HOH HOH . M 6 HOH B 32 1089 1089 HOH HOH . M 6 HOH B 33 1090 1090 HOH HOH . M 6 HOH B 34 1091 1091 HOH HOH . M 6 HOH B 35 1092 1092 HOH HOH . M 6 HOH B 36 1093 1093 HOH HOH . M 6 HOH B 37 1094 1094 HOH HOH . M 6 HOH B 38 1097 1097 HOH HOH . M 6 HOH B 39 1098 1098 HOH HOH . M 6 HOH B 40 1099 1099 HOH HOH . M 6 HOH B 41 1100 1100 HOH HOH . M 6 HOH B 42 1101 1101 HOH HOH . M 6 HOH B 43 1102 1102 HOH HOH . M 6 HOH B 44 3007 3007 HOH HOH . M 6 HOH B 45 3016 3016 HOH HOH . M 6 HOH B 46 3021 3021 HOH HOH . M 6 HOH B 47 3022 3022 HOH HOH . M 6 HOH B 48 3023 3023 HOH HOH . M 6 HOH B 49 3024 3024 HOH HOH . M 6 HOH B 50 3025 3025 HOH HOH . M 6 HOH B 51 3026 3026 HOH HOH . M 6 HOH B 52 3027 3027 HOH HOH . M 6 HOH B 53 3028 3028 HOH HOH . M 6 HOH B 54 3032 3032 HOH HOH . M 6 HOH B 55 3033 3033 HOH HOH . M 6 HOH B 56 3034 3034 HOH HOH . M 6 HOH B 57 3035 3035 HOH HOH . M 6 HOH B 58 3036 3036 HOH HOH . M 6 HOH B 59 3037 3037 HOH HOH . M 6 HOH B 60 3038 3038 HOH HOH . M 6 HOH B 61 3039 3039 HOH HOH . M 6 HOH B 62 3040 3040 HOH HOH . M 6 HOH B 63 3041 3041 HOH HOH . M 6 HOH B 64 3042 3042 HOH HOH . M 6 HOH B 65 3043 3043 HOH HOH . M 6 HOH B 66 3044 3044 HOH HOH . M 6 HOH B 67 4012 4012 HOH HOH . M 6 HOH B 68 4013 4013 HOH HOH . M 6 HOH B 69 4015 4015 HOH HOH . M 6 HOH B 70 4018 4018 HOH HOH . M 6 HOH B 71 5011 5011 HOH HOH . M 6 HOH B 72 5012 5012 HOH HOH . M 6 HOH B 73 5013 5013 HOH HOH . M 6 HOH B 74 5014 5014 HOH HOH . M 6 HOH B 75 5201 5201 HOH HOH . M 6 HOH B 76 5202 5202 HOH HOH . M 6 HOH B 77 5203 5203 HOH HOH . M 6 HOH B 78 5204 5204 HOH HOH . M 6 HOH B 79 5500 5500 HOH HOH . M 6 HOH B 80 5501 5501 HOH HOH . M 6 HOH B 81 5507 912 HOH MO3 . M 6 HOH B 82 5508 912 HOH MO3 . M 6 HOH B 83 5509 912 HOH MO3 . M 6 HOH B 84 5510 910 HOH MO2 . M 6 HOH B 85 5511 910 HOH MO2 . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x 38.681 _atom_site.Cartn_y 63.94 _atom_site.Cartn_z 33.961 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 13.85 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 902 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 289 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #