data_1I1A # _model_server_result.job_id Fl4-eqWiGZnxxZthyCxPsw _model_server_result.datetime_utc '2025-03-06 09:35:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1i1a # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":901}' # _entry.id 1I1A # _exptl.entry_id 1I1A _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 121.158 _entity.id 10 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description CYSTEINE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1I1A _cell.length_a 68.358 _cell.length_b 74.213 _cell.length_c 196.604 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1I1A _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 10 K N N ? 10 L N N # loop_ _pdbx_entity_branch.entity_id _pdbx_entity_branch.type 5 oligosaccharide 6 oligosaccharide 7 oligosaccharide 8 oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 5 2 1 FUC NAG C1 O1 . O6 HO6 . sing 2 ? 6 2 1 NAG NAG C1 O1 . O4 HO4 . sing 3 ? 6 3 2 BMA NAG C1 O1 . O4 HO4 . sing 4 ? 6 4 3 MAN BMA C1 O1 . O3 HO3 . sing 5 ? 6 5 4 NDG MAN C1 O1 . O2 HO2 . sing 6 ? 6 6 1 FUC NAG C1 O1 . O6 HO6 . sing 7 ? 7 2 1 NAG NAG C1 O1 . O4 HO4 . sing 8 ? 7 3 2 BMA NAG C1 O1 . O4 HO4 . sing 9 ? 7 4 3 MAN BMA C1 O1 . O3 HO3 . sing 10 ? 7 5 4 NAG MAN C1 O1 . O2 HO2 . sing 11 ? 7 6 3 MAN BMA C1 O1 . O6 HO6 . sing 12 ? 7 7 6 NAG MAN C1 O1 . O2 HO2 . sing 13 ? 7 8 1 FUL NAG C1 O1 . O6 HO6 . sing 14 ? 8 2 1 NAG NAG C1 O1 . O4 HO4 . sing 15 ? 8 3 2 BMA NAG C1 O1 . O4 HO4 . sing 16 ? 8 4 3 MAN BMA C1 O1 . O3 HO3 . sing 17 ? 8 5 4 NAG MAN C1 O1 . O2 HO2 . sing 18 ? 8 6 3 MAN BMA C1 O1 . O6 HO6 . sing 19 ? 8 7 6 NAG MAN C1 O1 . O2 HO2 . sing 20 ? 8 8 1 FUC NAG C1 O1 . O6 HO6 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 5 n E NAG 1 E 1 NAG J 651 NAG 5 n E FUC 2 E 2 FUC J 652 FUC 6 n F NAG 1 F 1 NAG K 701 NAG 6 n F NAG 2 F 2 NAG K 703 NAG 6 n F BMA 3 F 3 BMA K 704 MAN 6 n F MAN 4 F 4 MAN K 708 MAN 6 n F NDG 5 F 5 NDG K 709 NAG 6 n F FUC 6 F 6 FUC K 702 FUC 7 n G NAG 1 G 1 NAG G 501 NAG 7 n G NAG 2 G 2 NAG G 503 NAG 7 n G BMA 3 G 3 BMA G 504 MAN 7 n G MAN 4 G 4 MAN G 508 MAN 7 n G NAG 5 G 5 NAG G 509 NAG 7 n G MAN 6 G 6 MAN G 505 MAN 7 n G NAG 7 G 7 NAG G 506 NAG 7 n G FUL 8 G 8 FUL G 502 FUC 8 n H NAG 1 H 1 NAG H 551 NAG 8 n H NAG 2 H 2 NAG H 553 NAG 8 n H BMA 3 H 3 BMA H 554 MAN 8 n H MAN 4 H 4 MAN H 558 MAN 8 n H NAG 5 H 5 NAG H 559 NAG 8 n H MAN 6 H 6 MAN H 555 MAN 8 n H NAG 7 H 7 NAG H 556 NAG 8 n H FUC 8 H 8 FUC H 552 FUC # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 48 A CYS 48 1_555 K SG CYS . A CYS 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf2 A SG CYS 98 A CYS 98 1_555 A SG CYS 161 A CYS 161 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? disulf ? disulf3 A SG CYS 200 A CYS 200 1_555 A SG CYS 254 A CYS 254 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf4 A SG CYS 226 A CYS 226 1_555 L SG CYS . A CYS 951 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf5 B SG CYS 25 B CYS 25 1_555 B SG CYS 80 B CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf6 C SG CYS 39 C CYS 261 1_555 C SG CYS 99 C CYS 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf7 C SG CYS 145 C CYS 367 1_555 C SG CYS 203 C CYS 425 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf8 D SG CYS 39 D CYS 261 1_555 D SG CYS 99 D CYS 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf9 D SG CYS 145 D CYS 367 1_555 D SG CYS 203 D CYS 425 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? covale ? covale1 A ND2 ASN 87 A ASN 87 1_555 I C1 NAG . A NAG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.455 ? covale ? covale2 A ND2 ASN 104 A ASN 104 1_555 E C1 NAG . E NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.451 ? covale ? covale3 A ND2 ASN 128 A ASN 128 1_555 F C1 NAG . F NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.454 ? covale ? covale4 A ND2 ASN 225 A ASN 225 1_555 J C1 NAG . A NAG 751 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.453 ? covale ? covale5 C ND2 ASN 75 C ASN 297 1_555 G C1 NAG . G NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.452 ? covale ? covale6 D ND2 ASN 75 D ASN 297 1_555 H C1 NAG . H NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.454 ? covale ? covale7 E O6 NAG . E NAG 1 1_555 E C1 FUC . E FUC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.401 ? covale ? covale8 F O4 NAG . F NAG 1 1_555 F C1 NAG . F NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.386 ? covale ? covale9 F O6 NAG . F NAG 1 1_555 F C1 FUC . F FUC 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.402 ? covale ? covale10 F O4 NAG . F NAG 2 1_555 F C1 BMA . F BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.386 ? covale ? covale11 F O3 BMA . F BMA 3 1_555 F C1 MAN . F MAN 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.407 ? covale ? covale12 F O2 MAN . F MAN 4 1_555 F C1 NDG . F NDG 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.399 ? covale ? covale13 G O4 NAG . G NAG 1 1_555 G C1 NAG . G NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.386 ? covale ? covale14 G O6 NAG . G NAG 1 1_555 G C1 FUL . G FUL 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.401 ? covale ? covale15 G O4 NAG . G NAG 2 1_555 G C1 BMA . G BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.388 ? covale ? covale16 G O3 BMA . G BMA 3 1_555 G C1 MAN . G MAN 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.397 ? covale ? covale17 G O6 BMA . G BMA 3 1_555 G C1 MAN . G MAN 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.393 ? covale ? covale18 G O2 MAN . G MAN 4 1_555 G C1 NAG . G NAG 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.385 ? covale ? covale19 G O2 MAN . G MAN 6 1_555 G C1 NAG . G NAG 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.388 ? covale ? covale20 H O4 NAG . H NAG 1 1_555 H C1 NAG . H NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.387 ? covale ? covale21 H O6 NAG . H NAG 1 1_555 H C1 FUC . H FUC 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.398 ? covale ? covale22 H O4 NAG . H NAG 2 1_555 H C1 BMA . H BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.39 ? covale ? covale23 H O3 BMA . H BMA 3 1_555 H C1 MAN . H MAN 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.396 ? covale ? covale24 H O6 BMA . H BMA 3 1_555 H C1 MAN . H MAN 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.398 ? covale ? covale25 H O2 MAN . H MAN 4 1_555 H C1 NAG . H NAG 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.385 ? covale ? covale26 H O2 MAN . H MAN 6 1_555 H C1 NAG . H NAG 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.386 ? # _chem_comp.formula 'C3 H7 N O2 S' _chem_comp.formula_weight 121.158 _chem_comp.id CYS _chem_comp.mon_nstd_flag y _chem_comp.name CYSTEINE _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA CYS sing 94 n n N H CYS sing 95 n n N H2 CYS sing 96 n n CA C CYS sing 97 n n CA CB CYS sing 98 n n CA HA CYS sing 99 n n C O CYS doub 100 n n C OXT CYS sing 101 n n CB SG CYS sing 102 n n CB HB2 CYS sing 103 n n CB HB3 CYS sing 104 n n SG HG CYS sing 105 n n OXT HXT CYS sing 106 n n # _atom_sites.entry_id 1I1A _atom_sites.fract_transf_matrix[1][1] 0.014629 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013475 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005086 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 9 NAG A 1 601 601 NAG NAG . J 9 NAG A 1 751 751 NAG NAG . K 10 CYS A 1 901 901 CYS CYS . L 10 CYS A 1 951 951 CYS CYS . M 11 HOH A 1 981 981 HOH WAT . M 11 HOH A 2 982 982 HOH WAT . M 11 HOH A 3 984 984 HOH WAT . N 11 HOH B 1 983 983 HOH WAT . N 11 HOH B 2 985 985 HOH WAT . O 11 HOH C 1 986 986 HOH WAT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N CYS . . . K 10 26.215 -0.478 15.319 1 97.89 ? N CYS 901 A 1 HETATM 2 C CA CYS . . . K 10 25.614 0.677 16.067 1 99.01 ? CA CYS 901 A 1 HETATM 3 C C CYS . . . K 10 24.473 0.2 16.955 1 106.4 ? C CYS 901 A 1 HETATM 4 O O CYS . . . K 10 23.435 -0.258 16.397 1 106.35 ? O CYS 901 A 1 HETATM 5 C CB CYS . . . K 10 25.053 1.744 15.113 1 115.87 ? CB CYS 901 A 1 HETATM 6 S SG CYS . . . K 10 24.658 3.28 15.992 1 120.52 ? SG CYS 901 A 1 HETATM 7 O OXT CYS . . . K 10 24.633 0.312 18.189 1 89.75 ? OXT CYS 901 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 252 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 7 #