data_1I2E # _model_server_result.job_id Db5zowmMNss0EzpMSkYBqg _model_server_result.datetime_utc '2024-10-24 04:33:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1i2e # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":106}' # _entry.id 1I2E # _exptl.entry_id 1I2E _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 363.221 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "GUANOSINE-2'-MONOPHOSPHATE" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1I2E _cell.length_a 40.229 _cell.length_b 46.591 _cell.length_c 49.768 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1I2E _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 2 A CYS 2 1_555 A SG CYS 10 A CYS 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? disulf ? disulf2 A SG CYS 6 A CYS 6 1_555 A SG CYS 103 A CYS 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? metalc ? metalc1 A OD1 ASP 15 A ASP 15 1_555 B CA CA . A CA 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.556 ? metalc ? metalc2 A OD2 ASP 15 A ASP 15 1_555 B CA CA . A CA 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.469 ? metalc ? metalc3 B CA CA . A CA 105 1_555 D O HOH . A HOH 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.405 ? metalc ? metalc4 B CA CA . A CA 105 1_555 D O HOH . A HOH 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.39 ? metalc ? metalc5 B CA CA . A CA 105 1_555 D O HOH . A HOH 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.492 ? metalc ? metalc6 B CA CA . A CA 105 1_555 D O HOH . A HOH 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.39 ? metalc ? metalc7 B CA CA . A CA 105 1_555 D O HOH . A HOH 271 4_456 ? ? ? ? ? ? ? ? ? ? ? ? 2.395 ? metalc ? metalc8 B CA CA . A CA 105 1_555 D O HOH . A HOH 274 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.651 ? # _chem_comp.formula 'C10 H14 N5 O8 P' _chem_comp.formula_weight 363.221 _chem_comp.id 2GP _chem_comp.mon_nstd_flag . _chem_comp.name "GUANOSINE-2'-MONOPHOSPHATE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1I2E _atom_sites.fract_transf_matrix[1][1] 0.024858 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021463 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020093 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 105 105 CA CA . C 3 2GP A 1 106 106 2GP 2GP . D 4 HOH A 1 201 201 HOH HOH . D 4 HOH A 2 202 202 HOH HOH . D 4 HOH A 3 203 203 HOH HOH . D 4 HOH A 4 204 204 HOH HOH . D 4 HOH A 5 205 205 HOH HOH . D 4 HOH A 6 206 206 HOH HOH . D 4 HOH A 7 207 207 HOH HOH . D 4 HOH A 8 208 208 HOH HOH . D 4 HOH A 9 209 209 HOH HOH . D 4 HOH A 10 210 210 HOH HOH . D 4 HOH A 11 211 211 HOH HOH . D 4 HOH A 12 212 212 HOH HOH . D 4 HOH A 13 213 213 HOH HOH . D 4 HOH A 14 214 214 HOH HOH . D 4 HOH A 15 215 215 HOH HOH . D 4 HOH A 16 216 216 HOH HOH . D 4 HOH A 17 217 217 HOH HOH . D 4 HOH A 18 218 218 HOH HOH . D 4 HOH A 19 219 219 HOH HOH . D 4 HOH A 20 220 220 HOH HOH . D 4 HOH A 21 221 221 HOH HOH . D 4 HOH A 22 222 222 HOH HOH . D 4 HOH A 23 223 223 HOH HOH . D 4 HOH A 24 224 224 HOH HOH . D 4 HOH A 25 225 225 HOH HOH . D 4 HOH A 26 226 226 HOH HOH . D 4 HOH A 27 227 227 HOH HOH . D 4 HOH A 28 228 228 HOH HOH . D 4 HOH A 29 229 229 HOH HOH . D 4 HOH A 30 230 230 HOH HOH . D 4 HOH A 31 231 231 HOH HOH . D 4 HOH A 32 232 232 HOH HOH . D 4 HOH A 33 233 233 HOH HOH . D 4 HOH A 34 234 234 HOH HOH . D 4 HOH A 35 235 235 HOH HOH . D 4 HOH A 36 236 236 HOH HOH . D 4 HOH A 37 237 237 HOH HOH . D 4 HOH A 38 238 238 HOH HOH . D 4 HOH A 39 239 239 HOH HOH . D 4 HOH A 40 240 240 HOH HOH . D 4 HOH A 41 241 241 HOH HOH . D 4 HOH A 42 242 242 HOH HOH . D 4 HOH A 43 243 243 HOH HOH . D 4 HOH A 44 244 244 HOH HOH . D 4 HOH A 45 245 245 HOH HOH . D 4 HOH A 46 246 246 HOH HOH . D 4 HOH A 47 247 247 HOH HOH . D 4 HOH A 48 248 248 HOH HOH . D 4 HOH A 49 249 249 HOH HOH . D 4 HOH A 50 250 250 HOH HOH . D 4 HOH A 51 251 251 HOH HOH . D 4 HOH A 52 252 252 HOH HOH . D 4 HOH A 53 253 253 HOH HOH . D 4 HOH A 54 254 254 HOH HOH . D 4 HOH A 55 255 255 HOH HOH . D 4 HOH A 56 256 256 HOH HOH . D 4 HOH A 57 257 257 HOH HOH . D 4 HOH A 58 258 258 HOH HOH . D 4 HOH A 59 259 259 HOH HOH . D 4 HOH A 60 260 260 HOH HOH . D 4 HOH A 61 261 261 HOH HOH . D 4 HOH A 62 262 262 HOH HOH . D 4 HOH A 63 263 263 HOH HOH . D 4 HOH A 64 264 264 HOH HOH . D 4 HOH A 65 265 265 HOH HOH . D 4 HOH A 66 266 266 HOH HOH . D 4 HOH A 67 267 267 HOH HOH . D 4 HOH A 68 268 268 HOH HOH . D 4 HOH A 69 269 269 HOH HOH . D 4 HOH A 70 270 270 HOH HOH . D 4 HOH A 71 271 271 HOH HOH . D 4 HOH A 72 272 272 HOH HOH . D 4 HOH A 73 273 273 HOH HOH . D 4 HOH A 74 274 274 HOH HOH . D 4 HOH A 75 275 275 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P 2GP . . . C 3 19.164 19.699 10.135 1 31.82 ? P 2GP 106 A 1 HETATM 2 O O1P 2GP . . . C 3 20.198 20.241 11.052 1 33.66 ? O1P 2GP 106 A 1 HETATM 3 O O2P 2GP . . . C 3 18.058 20.627 9.886 1 32.99 ? O2P 2GP 106 A 1 HETATM 4 O O3P 2GP . . . C 3 18.733 18.323 10.426 1 32.94 ? O3P 2GP 106 A 1 HETATM 5 O O5' 2GP . . . C 3 25.338 19.408 8.8 1 35.93 ? O5' 2GP 106 A 1 HETATM 6 C C5' 2GP . . . C 3 24.346 18.519 8.267 1 33.29 ? C5' 2GP 106 A 1 HETATM 7 C C4' 2GP . . . C 3 23.31 19.314 7.453 1 32 ? C4' 2GP 106 A 1 HETATM 8 O O4' 2GP . . . C 3 22.515 18.396 6.684 1 30.92 ? O4' 2GP 106 A 1 HETATM 9 C C3' 2GP . . . C 3 22.306 20.08 8.308 1 31.36 ? C3' 2GP 106 A 1 HETATM 10 O O3' 2GP . . . C 3 21.936 21.257 7.533 1 32.25 ? O3' 2GP 106 A 1 HETATM 11 C C2' 2GP . . . C 3 21.167 19.061 8.468 1 30.55 ? C2' 2GP 106 A 1 HETATM 12 O O2' 2GP . . . C 3 19.862 19.643 8.694 1 31.89 ? O2' 2GP 106 A 1 HETATM 13 C C1' 2GP . . . C 3 21.138 18.41 7.119 1 28.92 ? C1' 2GP 106 A 1 HETATM 14 N N9 2GP . . . C 3 20.702 16.985 7.033 1 25.7 ? N9 2GP 106 A 1 HETATM 15 C C8 2GP . . . C 3 19.949 16.485 6.003 1 24.77 ? C8 2GP 106 A 1 HETATM 16 N N7 2GP . . . C 3 19.834 15.186 6.004 1 23.04 ? N7 2GP 106 A 1 HETATM 17 C C5 2GP . . . C 3 20.558 14.795 7.116 1 22.55 ? C5 2GP 106 A 1 HETATM 18 C C6 2GP . . . C 3 20.814 13.502 7.596 1 21.56 ? C6 2GP 106 A 1 HETATM 19 O O6 2GP . . . C 3 20.438 12.481 7.035 1 21.22 ? O6 2GP 106 A 1 HETATM 20 N N1 2GP . . . C 3 21.594 13.479 8.74 1 21.2 ? N1 2GP 106 A 1 HETATM 21 C C2 2GP . . . C 3 22.09 14.603 9.362 1 21.49 ? C2 2GP 106 A 1 HETATM 22 N N2 2GP . . . C 3 22.798 14.409 10.474 1 21.31 ? N2 2GP 106 A 1 HETATM 23 N N3 2GP . . . C 3 21.861 15.834 8.897 1 22.01 ? N3 2GP 106 A 1 HETATM 24 C C4 2GP . . . C 3 21.092 15.866 7.777 1 23.4 ? C4 2GP 106 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 286 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 24 #