data_1I5V # _model_server_result.job_id z_pOMzD6KEWr1WSCHf1oLA _model_server_result.datetime_utc '2024-10-18 13:23:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1i5v # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":7}' # _entry.id 1I5V # _exptl.entry_id 1I5V _exptl.method 'SOLUTION NMR' # _entity.details ? _entity.formula_weight 229.238 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-(PYRIDO[1,2-E]PURIN-4-YL)AMINO-ETHANOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1I5V _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1I5V _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order hydrog WATSON-CRICK hydrog1 A N1 DG 2 A DG 2 1_555 B N3 DC 5 B DC 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 A N2 DG 2 A DG 2 1_555 B O2 DC 5 B DC 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 A O6 DG 2 A DG 2 1_555 B N4 DC 5 B DC 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 A N1 DA 3 A DA 3 1_555 B N3 DT 4 B DT 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 A N6 DA 3 A DA 3 1_555 B O4 DT 4 B DT 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 A N3 DT 4 A DT 4 1_555 B N1 DA 3 B DA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 A O4 DT 4 A DT 4 1_555 B N6 DA 3 B DA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 A N3 DC 5 A DC 5 1_555 B N1 DG 2 B DG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 A N4 DC 5 A DC 5 1_555 B O6 DG 2 B DG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 A O2 DC 5 A DC 5 1_555 B N2 DG 2 B DG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'C11 H11 N5 O' _chem_comp.formula_weight 229.238 _chem_comp.id PPZ _chem_comp.mon_nstd_flag . _chem_comp.name 2-(PYRIDO[1,2-E]PURIN-4-YL)AMINO-ETHANOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C4 C5 PPZ doub 150 n y C4 N9 PPZ sing 151 n y C4 N3 PPZ sing 152 n y C5 N7 PPZ sing 153 n y C5 C6 PPZ sing 154 n y N7 C8 PPZ doub 155 n y C8 C13 PPZ sing 156 n y C8 N9 PPZ sing 157 n y C13 C12 PPZ doub 158 n y C13 H13 PPZ sing 159 n n C12 C11 PPZ sing 160 n y C12 H12 PPZ sing 161 n n C11 C10 PPZ doub 162 n y C11 H11 PPZ sing 163 n n C10 N9 PPZ sing 164 n y C10 H10 PPZ sing 165 n n C6 N6 PPZ sing 166 n n C6 N1 PPZ doub 167 n y N6 C61 PPZ sing 168 n n N6 H6 PPZ sing 169 n n N1 C2 PPZ sing 170 n y C2 N3 PPZ doub 171 n y C2 H2 PPZ sing 172 n n C61 C7 PPZ sing 173 n n C61 H61 PPZ sing 174 n n C61 H62 PPZ sing 175 n n C7 O8 PPZ sing 176 n n C7 H71 PPZ sing 177 n n C7 H72 PPZ sing 178 n n O8 H8 PPZ sing 179 n n # _atom_sites.entry_id 1I5V _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PPZ A 1 7 1 PPZ UNK . D 2 PPZ B 1 7 1 PPZ UNK . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 PPZ . . . D 2 -8.725 -3.934 0.769 1 0 ? C4 PPZ 7 B 1 HETATM 2 C C5 PPZ . . . D 2 -9.737 -3.798 -0.188 1 0 ? C5 PPZ 7 B 1 HETATM 3 N N7 PPZ . . . D 2 -9.16 -3.77 -1.459 1 0 ? N7 PPZ 7 B 1 HETATM 4 C C8 PPZ . . . D 2 -7.819 -4.061 -1.301 1 0 ? C8 PPZ 7 B 1 HETATM 5 C C13 PPZ . . . D 2 -6.787 -4.309 -2.22 1 0 ? C13 PPZ 7 B 1 HETATM 6 C C12 PPZ . . . D 2 -5.557 -4.787 -1.752 1 0 ? C12 PPZ 7 B 1 HETATM 7 C C11 PPZ . . . D 2 -5.37 -4.984 -0.376 1 0 ? C11 PPZ 7 B 1 HETATM 8 C C10 PPZ . . . D 2 -6.379 -4.645 0.54 1 0 ? C10 PPZ 7 B 1 HETATM 9 N N9 PPZ . . . D 2 -7.591 -4.211 0.049 1 0 ? N9 PPZ 7 B 1 HETATM 10 C C6 PPZ . . . D 2 -11.049 -3.764 0.311 1 0 ? C6 PPZ 7 B 1 HETATM 11 N N6 PPZ . . . D 2 -12.12 -3.975 -0.537 1 0 ? N6 PPZ 7 B 1 HETATM 12 N N1 PPZ . . . D 2 -11.239 -3.725 1.639 1 0 ? N1 PPZ 7 B 1 HETATM 13 C C2 PPZ . . . D 2 -10.177 -3.788 2.441 1 0 ? C2 PPZ 7 B 1 HETATM 14 N N3 PPZ . . . D 2 -8.894 -3.919 2.115 1 0 ? N3 PPZ 7 B 1 HETATM 15 C C61 PPZ . . . D 2 -12.037 -4.339 -1.942 1 0 ? C61 PPZ 7 B 1 HETATM 16 C C7 PPZ . . . D 2 -11.069 -5.512 -2.134 1 0 ? C7 PPZ 7 B 1 HETATM 17 O O8 PPZ . . . D 2 -11.695 -6.756 -1.901 1 0 ? O8 PPZ 7 B 1 HETATM 18 H H13 PPZ . . . D 2 -6.972 -4.214 -3.279 1 0 ? H13 PPZ 7 B 1 HETATM 19 H H12 PPZ . . . D 2 -4.768 -5.026 -2.452 1 0 ? H12 PPZ 7 B 1 HETATM 20 H H11 PPZ . . . D 2 -4.445 -5.416 -0.024 1 0 ? H11 PPZ 7 B 1 HETATM 21 H H10 PPZ . . . D 2 -6.237 -4.778 1.604 1 0 ? H10 PPZ 7 B 1 HETATM 22 H H6 PPZ . . . D 2 -13.035 -3.928 -0.115 1 0 ? H6 PPZ 7 B 1 HETATM 23 H H2 PPZ . . . D 2 -10.389 -3.757 3.499 1 0 ? H2 PPZ 7 B 1 HETATM 24 H H61 PPZ . . . D 2 -11.385 -3.613 -2.431 1 0 ? H61 PPZ 7 B 1 HETATM 25 H H62 PPZ . . . D 2 -13.015 -4.465 -2.407 1 0 ? H62 PPZ 7 B 1 HETATM 26 H H71 PPZ . . . D 2 -10.64 -5.501 -3.137 1 0 ? H71 PPZ 7 B 1 HETATM 27 H H72 PPZ . . . D 2 -10.213 -5.399 -1.452 1 0 ? H72 PPZ 7 B 1 HETATM 28 H H8 PPZ . . . D 2 -12.094 -6.736 -1.026 1 0 ? H8 PPZ 7 B 1 # _model_server_stats.io_time_ms 54 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 5746 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 28 #