data_1I8F
#
_model_server_result.job_id            rJmfj9FaDxgGPkcCIogH9g 
_model_server_result.datetime_utc      '2025-04-07 17:18:24' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1i8f 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"L","auth_seq_id":1003}' 
#
_entry.id    1I8F 
#
_exptl.entry_id    1I8F 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          92.69 
_cell.angle_gamma         90 
_cell.entry_id            1I8F 
_cell.length_a            100.261 
_cell.length_b            95.738 
_cell.length_c            62.157 
_cell.Z_PDB               28 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1I8F 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    heptameric 
_pdbx_struct_assembly.oligomeric_count      7 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 H N N 
? 2 I N N 
? 2 J N N 
? 2 K N N 
? 2 L N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     1I8F 
_atom_sites.fract_transf_matrix[1][1]    0.009974 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000468 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010445 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.016106 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
H 2 GOL A 1 1001 1001 GOL GOL . 
I 2 GOL C 1 1005 1005 GOL GOL . 
J 2 GOL D 1 1004 1004 GOL GOL . 
K 2 GOL G 1 1002 1002 GOL GOL . 
L 2 GOL G 1 1003 1003 GOL GOL . 
M 3 HOH A 1 1002 5 HOH HOH . 
M 3 HOH A 2 1003 12 HOH HOH . 
M 3 HOH A 3 1004 21 HOH HOH . 
M 3 HOH A 4 1005 23 HOH HOH . 
M 3 HOH A 5 1006 31 HOH HOH . 
M 3 HOH A 6 1007 40 HOH HOH . 
M 3 HOH A 7 1008 43 HOH HOH . 
M 3 HOH A 8 1009 54 HOH HOH . 
M 3 HOH A 9 1010 58 HOH HOH . 
M 3 HOH A 10 1011 59 HOH HOH . 
M 3 HOH A 11 1012 67 HOH HOH . 
M 3 HOH A 12 1013 69 HOH HOH . 
M 3 HOH A 13 1014 72 HOH HOH . 
M 3 HOH A 14 1015 80 HOH HOH . 
M 3 HOH A 15 1016 85 HOH HOH . 
M 3 HOH A 16 1017 94 HOH HOH . 
M 3 HOH A 17 1018 97 HOH HOH . 
M 3 HOH A 18 1019 103 HOH HOH . 
M 3 HOH A 19 1020 105 HOH HOH . 
M 3 HOH A 20 1021 106 HOH HOH . 
M 3 HOH A 21 1022 109 HOH HOH . 
M 3 HOH A 22 1023 114 HOH HOH . 
M 3 HOH A 23 1024 115 HOH HOH . 
M 3 HOH A 24 1025 130 HOH HOH . 
N 3 HOH B 1 82 3 HOH HOH . 
N 3 HOH B 2 83 13 HOH HOH . 
N 3 HOH B 3 84 20 HOH HOH . 
N 3 HOH B 4 85 22 HOH HOH . 
N 3 HOH B 5 86 30 HOH HOH . 
N 3 HOH B 6 87 32 HOH HOH . 
N 3 HOH B 7 88 33 HOH HOH . 
N 3 HOH B 8 89 38 HOH HOH . 
N 3 HOH B 9 90 57 HOH HOH . 
N 3 HOH B 10 91 70 HOH HOH . 
N 3 HOH B 11 92 71 HOH HOH . 
N 3 HOH B 12 93 77 HOH HOH . 
N 3 HOH B 13 94 81 HOH HOH . 
N 3 HOH B 14 95 102 HOH HOH . 
N 3 HOH B 15 96 110 HOH HOH . 
N 3 HOH B 16 97 112 HOH HOH . 
N 3 HOH B 17 98 121 HOH HOH . 
N 3 HOH B 18 99 123 HOH HOH . 
N 3 HOH B 19 100 124 HOH HOH . 
N 3 HOH B 20 101 128 HOH HOH . 
O 3 HOH C 1 1006 2 HOH HOH . 
O 3 HOH C 2 1007 10 HOH HOH . 
O 3 HOH C 3 1008 16 HOH HOH . 
O 3 HOH C 4 1009 18 HOH HOH . 
O 3 HOH C 5 1010 25 HOH HOH . 
O 3 HOH C 6 1011 26 HOH HOH . 
O 3 HOH C 7 1012 37 HOH HOH . 
O 3 HOH C 8 1013 45 HOH HOH . 
O 3 HOH C 9 1014 50 HOH HOH . 
O 3 HOH C 10 1015 53 HOH HOH . 
O 3 HOH C 11 1016 74 HOH HOH . 
O 3 HOH C 12 1017 84 HOH HOH . 
O 3 HOH C 13 1018 87 HOH HOH . 
O 3 HOH C 14 1019 90 HOH HOH . 
O 3 HOH C 15 1020 91 HOH HOH . 
O 3 HOH C 16 1021 100 HOH HOH . 
O 3 HOH C 17 1022 107 HOH HOH . 
O 3 HOH C 18 1023 111 HOH HOH . 
O 3 HOH C 19 1024 116 HOH HOH . 
O 3 HOH C 20 1025 119 HOH HOH . 
O 3 HOH C 21 1026 125 HOH HOH . 
O 3 HOH C 22 1027 127 HOH HOH . 
P 3 HOH D 1 1005 8 HOH HOH . 
P 3 HOH D 2 1006 15 HOH HOH . 
P 3 HOH D 3 1007 34 HOH HOH . 
P 3 HOH D 4 1008 36 HOH HOH . 
P 3 HOH D 5 1009 39 HOH HOH . 
P 3 HOH D 6 1010 41 HOH HOH . 
P 3 HOH D 7 1011 44 HOH HOH . 
P 3 HOH D 8 1012 48 HOH HOH . 
P 3 HOH D 9 1013 55 HOH HOH . 
P 3 HOH D 10 1014 60 HOH HOH . 
P 3 HOH D 11 1015 66 HOH HOH . 
Q 3 HOH E 1 82 4 HOH HOH . 
Q 3 HOH E 2 83 11 HOH HOH . 
Q 3 HOH E 3 84 24 HOH HOH . 
Q 3 HOH E 4 85 35 HOH HOH . 
Q 3 HOH E 5 86 46 HOH HOH . 
Q 3 HOH E 6 87 49 HOH HOH . 
Q 3 HOH E 7 88 52 HOH HOH . 
Q 3 HOH E 8 89 63 HOH HOH . 
Q 3 HOH E 9 90 73 HOH HOH . 
Q 3 HOH E 10 91 76 HOH HOH . 
Q 3 HOH E 11 92 79 HOH HOH . 
Q 3 HOH E 12 93 82 HOH HOH . 
Q 3 HOH E 13 94 92 HOH HOH . 
Q 3 HOH E 14 95 96 HOH HOH . 
Q 3 HOH E 15 96 98 HOH HOH . 
Q 3 HOH E 16 97 99 HOH HOH . 
Q 3 HOH E 17 98 108 HOH HOH . 
Q 3 HOH E 18 99 117 HOH HOH . 
Q 3 HOH E 19 100 118 HOH HOH . 
Q 3 HOH E 20 101 120 HOH HOH . 
R 3 HOH F 1 82 9 HOH HOH . 
R 3 HOH F 2 83 17 HOH HOH . 
R 3 HOH F 3 84 19 HOH HOH . 
R 3 HOH F 4 85 27 HOH HOH . 
R 3 HOH F 5 86 28 HOH HOH . 
R 3 HOH F 6 87 42 HOH HOH . 
R 3 HOH F 7 88 51 HOH HOH . 
R 3 HOH F 8 89 56 HOH HOH . 
R 3 HOH F 9 90 65 HOH HOH . 
R 3 HOH F 10 91 88 HOH HOH . 
R 3 HOH F 11 92 101 HOH HOH . 
R 3 HOH F 12 93 122 HOH HOH . 
S 3 HOH G 1 1004 1 HOH HOH . 
S 3 HOH G 2 1005 6 HOH HOH . 
S 3 HOH G 3 1006 7 HOH HOH . 
S 3 HOH G 4 1007 14 HOH HOH . 
S 3 HOH G 5 1008 29 HOH HOH . 
S 3 HOH G 6 1009 47 HOH HOH . 
S 3 HOH G 7 1010 61 HOH HOH . 
S 3 HOH G 8 1011 62 HOH HOH . 
S 3 HOH G 9 1012 64 HOH HOH . 
S 3 HOH G 10 1013 68 HOH HOH . 
S 3 HOH G 11 1014 75 HOH HOH . 
S 3 HOH G 12 1015 78 HOH HOH . 
S 3 HOH G 13 1016 83 HOH HOH . 
S 3 HOH G 14 1017 86 HOH HOH . 
S 3 HOH G 15 1018 89 HOH HOH . 
S 3 HOH G 16 1019 93 HOH HOH . 
S 3 HOH G 17 1020 95 HOH HOH . 
S 3 HOH G 18 1021 104 HOH HOH . 
S 3 HOH G 19 1022 113 HOH HOH . 
S 3 HOH G 20 1023 126 HOH HOH . 
S 3 HOH G 21 1024 129 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . L 2 40.802 78.079 3.139 1 48.15 ? C1 GOL 1003 G 1 
HETATM 2 O O1 GOL . . . L 2 40.757 78.588 4.628 1 36.88 ? O1 GOL 1003 G 1 
HETATM 3 C C2 GOL . . . L 2 40.126 78.666 2.11 1 53.78 ? C2 GOL 1003 G 1 
HETATM 4 O O2 GOL . . . L 2 39.907 79.989 2.353 1 46.85 ? O2 GOL 1003 G 1 
HETATM 5 C C3 GOL . . . L 2 39.919 77.832 1.253 1 56.27 ? C3 GOL 1003 G 1 
HETATM 6 O O3 GOL . . . L 2 39.684 77.19 -0.163 1 67.28 ? O3 GOL 1003 G 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           300 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           6 
#