data_1I8L
#
_model_server_result.job_id            tUn-Qd7jRfvLFZhvXh55DQ 
_model_server_result.datetime_utc      '2025-03-06 19:54:11' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1i8l 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"Q","auth_seq_id":213}' 
#
_entry.id    1I8L 
#
_exptl.entry_id    1I8L 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              180.156 
_entity.id                          4 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            alpha-D-mannopyranose 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1I8L 
_cell.length_a            88.6 
_cell.length_b            183.238 
_cell.length_c            230.726 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1I8L 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? dimeric 2 author_defined_assembly 1 
? dimeric 2 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E,F,G,H,I,J,K,L,U,V 1 1 
B,D,M,N,O,P,Q,R,S,T,W,X 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 I N N 
? 4 Q N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 16 A CYS 16 1_555 A SG CYS 82 A CYS 82 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? 
disulf ? disulf2 A SG CYS 128 A CYS 128 1_555 A SG CYS 182 A CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf3 B SG CYS 16 B CYS 16 1_555 B SG CYS 82 B CYS 82 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? 
disulf ? disulf4 B SG CYS 128 B CYS 128 1_555 B SG CYS 182 B CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
disulf ? disulf5 C SG CYS 23 C CYS 23 1_555 C SG CYS 94 C CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf6 C SG CYS 50 C CYS 50 1_555 C SG CYS 68 C CYS 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
disulf ? disulf7 D SG CYS 23 D CYS 23 1_555 D SG CYS 94 D CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf8 D SG CYS 50 D CYS 50 1_555 D SG CYS 68 D CYS 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
#
_chem_comp.formula           'C6 H12 O6' 
_chem_comp.formula_weight    180.156 
_chem_comp.id                MAN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              alpha-D-mannopyranose 
_chem_comp.type              'd-saccharide, alpha linking' 
_chem_comp.pdbx_synonyms     alpha-D-mannose;D-mannose;mannose 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 MAN sing 216 n n 
C1 O1 MAN sing 217 n n 
C1 O5 MAN sing 218 n n 
C1 H1 MAN sing 219 n n 
C2 C3 MAN sing 220 n n 
C2 O2 MAN sing 221 n n 
C2 H2 MAN sing 222 n n 
C3 C4 MAN sing 223 n n 
C3 O3 MAN sing 224 n n 
C3 H3 MAN sing 225 n n 
C4 C5 MAN sing 226 n n 
C4 O4 MAN sing 227 n n 
C4 H4 MAN sing 228 n n 
C5 C6 MAN sing 229 n n 
C5 O5 MAN sing 230 n n 
C5 H5 MAN sing 231 n n 
C6 O6 MAN sing 232 n n 
C6 H61 MAN sing 233 n n 
C6 H62 MAN sing 234 n n 
O1 HO1 MAN sing 235 n n 
O2 HO2 MAN sing 236 n n 
O3 HO3 MAN sing 237 n n 
O4 HO4 MAN sing 238 n n 
O6 HO6 MAN sing 239 n n 
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.identifier
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
MAN DManpa 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 
MAN a-D-mannopyranose 'COMMON NAME' GMML 1 
MAN a-D-Manp 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 
MAN Man 'SNFG CARBOHYDRATE SYMBOL' GMML 1 
#
_atom_sites.entry_id                     1I8L 
_atom_sites.fract_transf_matrix[1][1]    0.011287 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005457 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004334 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 NAG A 1 209 1 NAG NAG . 
F 3 NAG A 1 210 2 NAG NAG . 
G 3 NAG A 1 211 3 NAG NAG . 
H 3 NAG A 1 212 4 NAG NAG . 
I 4 MAN A 1 213 5 MAN MAN . 
J 3 NAG A 1 214 6 NAG NAG . 
K 3 NAG A 1 215 7 NAG NAG . 
L 3 NAG A 1 216 8 NAG NAG . 
M 3 NAG B 1 209 9 NAG NAG . 
N 3 NAG B 1 210 10 NAG NAG . 
O 3 NAG B 1 211 11 NAG NAG . 
P 3 NAG B 1 212 12 NAG NAG . 
Q 4 MAN B 1 213 13 MAN MAN . 
R 3 NAG B 1 214 14 NAG NAG . 
S 3 NAG B 1 215 15 NAG NAG . 
T 3 NAG B 1 216 16 NAG NAG . 
U 3 NAG C 1 127 17 NAG NAG . 
V 3 NAG C 1 128 18 NAG NAG . 
W 3 NAG D 1 127 19 NAG NAG . 
X 3 NAG D 1 128 20 NAG NAG . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 MAN . . . Q 4 47.305 86.247 181.092 1 166.28 ? C1 MAN 213 B 1 
HETATM 2 C C2 MAN . . . Q 4 48.136 85.102 180.406 1 166.39 ? C2 MAN 213 B 1 
HETATM 3 C C3 MAN . . . Q 4 47.246 83.832 180.215 1 166.64 ? C3 MAN 213 B 1 
HETATM 4 C C4 MAN . . . Q 4 46.692 83.385 181.606 1 166.73 ? C4 MAN 213 B 1 
HETATM 5 C C5 MAN . . . Q 4 45.865 84.577 182.248 1 166.36 ? C5 MAN 213 B 1 
HETATM 6 C C6 MAN . . . Q 4 45.328 84.229 183.662 1 164.61 ? C6 MAN 213 B 1 
HETATM 7 O O2 MAN . . . Q 4 49.316 84.736 181.13 1 165.56 ? O2 MAN 213 B 1 
HETATM 8 O O3 MAN . . . Q 4 47.987 82.78 179.612 1 166.31 ? O3 MAN 213 B 1 
HETATM 9 O O4 MAN . . . Q 4 45.896 82.22 181.438 1 165.49 ? O4 MAN 213 B 1 
HETATM 10 O O5 MAN . . . Q 4 46.718 85.756 182.356 1 167.03 ? O5 MAN 213 B 1 
HETATM 11 O O6 MAN . . . Q 4 44.493 83.091 183.676 1 162.29 ? O6 MAN 213 B 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           241 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           11 
#