data_1IAM # _model_server_result.job_id iSqMAyuvCgLG--zWsy3plg _model_server_result.datetime_utc '2024-11-09 02:25:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1iam # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":275}' # _entry.id 1IAM # _exptl.entry_id 1IAM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 221.208 _entity.id 2 _entity.src_method man _entity.type non-polymer _entity.pdbx_description 2-acetamido-2-deoxy-beta-D-glucopyranose _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1IAM _cell.length_a 41.857 _cell.length_b 124.736 _cell.length_c 83.186 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1IAM _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_565 x,-y+1,-z 1 0 0 0 -1 0 0 0 -1 0 124.736 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 21 A CYS 21 1_555 A SG CYS 65 A CYS 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf2 A SG CYS 25 A CYS 25 1_555 A SG CYS 69 A CYS 69 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf3 A SG CYS 108 A CYS 108 1_555 A SG CYS 159 A CYS 159 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? covale ? covale1 A ND2 ASN 175 A ASN 175 1_555 B C1 NAG . A NAG 275 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.454 ? # _chem_comp.formula 'C8 H15 N O6' _chem_comp.formula_weight 221.208 _chem_comp.id NAG _chem_comp.mon_nstd_flag . _chem_comp.name 2-acetamido-2-deoxy-beta-D-glucopyranose _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms N-acetyl-beta-D-glucosamine;2-acetamido-2-deoxy-beta-D-glucose;2-acetamido-2-deoxy-D-glucose;2-acetamido-2-deoxy-glucose;N-ACETYL-D-GLUCOSAMINE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 NAG sing 237 n n C1 O1 NAG sing 238 n n C1 O5 NAG sing 239 n n C1 H1 NAG sing 240 n n C2 C3 NAG sing 241 n n C2 N2 NAG sing 242 n n C2 H2 NAG sing 243 n n C3 C4 NAG sing 244 n n C3 O3 NAG sing 245 n n C3 H3 NAG sing 246 n n C4 C5 NAG sing 247 n n C4 O4 NAG sing 248 n n C4 H4 NAG sing 249 n n C5 C6 NAG sing 250 n n C5 O5 NAG sing 251 n n C5 H5 NAG sing 252 n n C6 O6 NAG sing 253 n n C6 H61 NAG sing 254 n n C6 H62 NAG sing 255 n n C7 C8 NAG sing 256 n n C7 N2 NAG sing 257 n n C7 O7 NAG doub 258 n n C8 H81 NAG sing 259 n n C8 H82 NAG sing 260 n n C8 H83 NAG sing 261 n n N2 HN2 NAG sing 262 n n O1 HO1 NAG sing 263 n n O3 HO3 NAG sing 264 n n O4 HO4 NAG sing 265 n n O6 HO6 NAG sing 266 n n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.identifier _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 # _atom_sites.entry_id 1IAM _atom_sites.fract_transf_matrix[1][1] 0.023891 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008017 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012021 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAG A 1 275 275 NAG NAG . C 3 HOH A 1 400 400 HOH HOH . C 3 HOH A 2 401 401 HOH HOH . C 3 HOH A 3 402 402 HOH HOH . C 3 HOH A 4 403 403 HOH HOH . C 3 HOH A 5 404 404 HOH HOH . C 3 HOH A 6 405 405 HOH HOH . C 3 HOH A 7 406 406 HOH HOH . C 3 HOH A 8 407 407 HOH HOH . C 3 HOH A 9 408 408 HOH HOH . C 3 HOH A 10 409 409 HOH HOH . C 3 HOH A 11 410 410 HOH HOH . C 3 HOH A 12 411 411 HOH HOH . C 3 HOH A 13 412 412 HOH HOH . C 3 HOH A 14 413 413 HOH HOH . C 3 HOH A 15 414 414 HOH HOH . C 3 HOH A 16 415 415 HOH HOH . C 3 HOH A 17 416 416 HOH HOH . C 3 HOH A 18 417 417 HOH HOH . C 3 HOH A 19 418 418 HOH HOH . C 3 HOH A 20 419 419 HOH HOH . C 3 HOH A 21 420 420 HOH HOH . C 3 HOH A 22 421 421 HOH HOH . C 3 HOH A 23 422 422 HOH HOH . C 3 HOH A 24 423 423 HOH HOH . C 3 HOH A 25 424 424 HOH HOH . C 3 HOH A 26 425 425 HOH HOH . C 3 HOH A 27 426 426 HOH HOH . C 3 HOH A 28 427 427 HOH HOH . C 3 HOH A 29 428 428 HOH HOH . C 3 HOH A 30 429 429 HOH HOH . C 3 HOH A 31 430 430 HOH HOH . C 3 HOH A 32 431 431 HOH HOH . C 3 HOH A 33 432 432 HOH HOH . C 3 HOH A 34 433 433 HOH HOH . C 3 HOH A 35 434 434 HOH HOH . C 3 HOH A 36 435 435 HOH HOH . C 3 HOH A 37 436 436 HOH HOH . C 3 HOH A 38 437 437 HOH HOH . C 3 HOH A 39 438 438 HOH HOH . C 3 HOH A 40 439 439 HOH HOH . C 3 HOH A 41 440 440 HOH HOH . C 3 HOH A 42 441 441 HOH HOH . C 3 HOH A 43 442 442 HOH HOH . C 3 HOH A 44 443 443 HOH HOH . C 3 HOH A 45 444 444 HOH HOH . C 3 HOH A 46 445 445 HOH HOH . C 3 HOH A 47 446 446 HOH HOH . C 3 HOH A 48 447 447 HOH HOH . C 3 HOH A 49 448 448 HOH HOH . C 3 HOH A 50 449 449 HOH HOH . C 3 HOH A 51 450 450 HOH HOH . C 3 HOH A 52 451 451 HOH HOH . C 3 HOH A 53 452 452 HOH HOH . C 3 HOH A 54 453 453 HOH HOH . C 3 HOH A 55 454 454 HOH HOH . C 3 HOH A 56 455 455 HOH HOH . C 3 HOH A 57 456 456 HOH HOH . C 3 HOH A 58 457 457 HOH HOH . C 3 HOH A 59 458 458 HOH HOH . C 3 HOH A 60 459 459 HOH HOH . C 3 HOH A 61 460 460 HOH HOH . C 3 HOH A 62 461 461 HOH HOH . C 3 HOH A 63 462 462 HOH HOH . C 3 HOH A 64 463 463 HOH HOH . C 3 HOH A 65 464 464 HOH HOH . C 3 HOH A 66 465 465 HOH HOH . C 3 HOH A 67 466 466 HOH HOH . C 3 HOH A 68 467 467 HOH HOH . C 3 HOH A 69 468 468 HOH HOH . C 3 HOH A 70 469 469 HOH HOH . C 3 HOH A 71 470 470 HOH HOH . C 3 HOH A 72 471 471 HOH HOH . C 3 HOH A 73 472 472 HOH HOH . C 3 HOH A 74 473 473 HOH HOH . C 3 HOH A 75 474 474 HOH HOH . C 3 HOH A 76 475 475 HOH HOH . C 3 HOH A 77 476 476 HOH HOH . C 3 HOH A 78 477 477 HOH HOH . C 3 HOH A 79 478 478 HOH HOH . C 3 HOH A 80 479 479 HOH HOH . C 3 HOH A 81 480 480 HOH HOH . C 3 HOH A 82 481 481 HOH HOH . C 3 HOH A 83 482 482 HOH HOH . C 3 HOH A 84 483 483 HOH HOH . C 3 HOH A 85 484 484 HOH HOH . C 3 HOH A 86 485 485 HOH HOH . C 3 HOH A 87 486 486 HOH HOH . C 3 HOH A 88 487 487 HOH HOH . C 3 HOH A 89 488 488 HOH HOH . C 3 HOH A 90 489 489 HOH HOH . C 3 HOH A 91 490 490 HOH HOH . C 3 HOH A 92 491 491 HOH HOH . C 3 HOH A 93 492 492 HOH HOH . C 3 HOH A 94 493 493 HOH HOH . C 3 HOH A 95 494 494 HOH HOH . C 3 HOH A 96 495 495 HOH HOH . C 3 HOH A 97 496 496 HOH HOH . C 3 HOH A 98 497 497 HOH HOH . C 3 HOH A 99 498 498 HOH HOH . C 3 HOH A 100 499 499 HOH HOH . C 3 HOH A 101 500 500 HOH HOH . C 3 HOH A 102 501 501 HOH HOH . C 3 HOH A 103 502 502 HOH HOH . C 3 HOH A 104 503 503 HOH HOH . C 3 HOH A 105 504 504 HOH HOH . C 3 HOH A 106 505 505 HOH HOH . C 3 HOH A 107 506 506 HOH HOH . C 3 HOH A 108 507 507 HOH HOH . C 3 HOH A 109 508 508 HOH HOH . C 3 HOH A 110 509 509 HOH HOH . C 3 HOH A 111 510 510 HOH HOH . C 3 HOH A 112 511 511 HOH HOH . C 3 HOH A 113 512 512 HOH HOH . C 3 HOH A 114 513 513 HOH HOH . C 3 HOH A 115 514 514 HOH HOH . C 3 HOH A 116 515 515 HOH HOH . C 3 HOH A 117 516 516 HOH HOH . C 3 HOH A 118 517 517 HOH HOH . C 3 HOH A 119 518 518 HOH HOH . C 3 HOH A 120 519 519 HOH HOH . C 3 HOH A 121 520 520 HOH HOH . C 3 HOH A 122 521 521 HOH HOH . C 3 HOH A 123 522 522 HOH HOH . C 3 HOH A 124 523 523 HOH HOH . C 3 HOH A 125 524 524 HOH HOH . C 3 HOH A 126 525 525 HOH HOH . C 3 HOH A 127 526 526 HOH HOH . C 3 HOH A 128 527 527 HOH HOH . C 3 HOH A 129 528 528 HOH HOH . C 3 HOH A 130 529 529 HOH HOH . C 3 HOH A 131 530 530 HOH HOH . C 3 HOH A 132 531 531 HOH HOH . C 3 HOH A 133 532 532 HOH HOH . C 3 HOH A 134 533 533 HOH HOH . C 3 HOH A 135 534 534 HOH HOH . C 3 HOH A 136 535 535 HOH HOH . C 3 HOH A 137 536 536 HOH HOH . C 3 HOH A 138 537 537 HOH HOH . C 3 HOH A 139 538 538 HOH HOH . C 3 HOH A 140 539 539 HOH HOH . C 3 HOH A 141 540 540 HOH HOH . C 3 HOH A 142 541 541 HOH HOH . C 3 HOH A 143 542 542 HOH HOH . C 3 HOH A 144 543 543 HOH HOH . C 3 HOH A 145 544 544 HOH HOH . C 3 HOH A 146 545 545 HOH HOH . C 3 HOH A 147 546 546 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 NAG . . . B 2 38.937 79.092 -11.448 1 29.13 ? C1 NAG 275 A 1 HETATM 2 C C2 NAG . . . B 2 38.221 80.007 -12.45 1 28.72 ? C2 NAG 275 A 1 HETATM 3 C C3 NAG . . . B 2 36.84 79.46 -12.841 1 30.16 ? C3 NAG 275 A 1 HETATM 4 C C4 NAG . . . B 2 36.925 77.977 -13.215 1 30.85 ? C4 NAG 275 A 1 HETATM 5 C C5 NAG . . . B 2 37.63 77.228 -12.096 1 31.59 ? C5 NAG 275 A 1 HETATM 6 C C6 NAG . . . B 2 37.774 75.746 -12.344 1 32.25 ? C6 NAG 275 A 1 HETATM 7 C C7 NAG . . . B 2 38.719 82.343 -12.311 1 29.49 ? C7 NAG 275 A 1 HETATM 8 C C8 NAG . . . B 2 38.491 83.663 -11.594 1 30.26 ? C8 NAG 275 A 1 HETATM 9 N N2 NAG . . . B 2 38.054 81.302 -11.841 1 27.43 ? N2 NAG 275 A 1 HETATM 10 O O3 NAG . . . B 2 36.333 80.208 -13.94 1 29 ? O3 NAG 275 A 1 HETATM 11 O O4 NAG . . . B 2 35.619 77.447 -13.415 1 32.68 ? O4 NAG 275 A 1 HETATM 12 O O5 NAG . . . B 2 38.958 77.755 -11.934 1 31.29 ? O5 NAG 275 A 1 HETATM 13 O O6 NAG . . . B 2 38.74 75.182 -11.463 1 35.19 ? O6 NAG 275 A 1 HETATM 14 O O7 NAG . . . B 2 39.498 82.275 -13.27 1 31.16 ? O7 NAG 275 A 1 # _model_server_stats.io_time_ms 57 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 14 #