data_1ID5
#
_model_server_result.job_id            dlWY5bgZ2-BH0ZwnDvvqEQ 
_model_server_result.datetime_utc      '2025-03-09 02:34:55' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1id5 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":800}' 
#
_entry.id    1ID5 
#
_exptl.entry_id    1ID5 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              122.143 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1ID5 
_cell.length_a            88.517 
_cell.length_b            165.377 
_cell.length_c            83.326 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1ID5 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    hexameric 
_pdbx_struct_assembly.oligomeric_count      6 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 4_556 x,-y,-z+1 1 0 0 0 -1 0 0 0 -1 0 0 83.326 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 22 L CYS 1 1_555 B SG CYS 119 H CYS 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? 
disulf ? disulf2 B SG CYS 28 H CYS 42 1_555 B SG CYS 44 H CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? 
disulf ? disulf3 B SG CYS 173 H CYS 168 1_555 B SG CYS 187 H CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? 
disulf ? disulf4 B SG CYS 201 H CYS 191 1_555 B SG CYS 231 H CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? 
disulf ? disulf5 C SG CYS 50 I CYS 50 1_555 C SG CYS 87 I CYS 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
metalc ? metalc1 B O ARG 233 H ARG 221 1_555 D CA CA . H CA 600 1_555 A ? ? ? ? ? ? ? ? ? ? ? 2.306 ? 
metalc ? metalc2 B O LYS 236 H LYS 224 1_555 D CA CA . H CA 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.374 ? 
metalc ? metalc3 D CA CA . H CA 600 1_555 G O HOH . H HOH 840 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.845 ? 
metalc ? metalc4 D CA CA . H CA 600 1_555 G O HOH . H HOH 841 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.786 ? 
metalc ? metalc5 D CA CA . H CA 600 1_555 G O HOH . H HOH 847 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.133 ? 
#
_chem_comp.formula           'C4 H12 N O3 1' 
_chem_comp.formula_weight    122.143 
_chem_comp.id                TRS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'TRIS BUFFER' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C C1 TRS sing 334 n n 
C C2 TRS sing 335 n n 
C C3 TRS sing 336 n n 
C N TRS sing 337 n n 
C1 O1 TRS sing 338 n n 
C1 H11 TRS sing 339 n n 
C1 H12 TRS sing 340 n n 
C2 O2 TRS sing 341 n n 
C2 H21 TRS sing 342 n n 
C2 H22 TRS sing 343 n n 
C3 O3 TRS sing 344 n n 
C3 H31 TRS sing 345 n n 
C3 H32 TRS sing 346 n n 
N HN1 TRS sing 347 n n 
N HN2 TRS sing 348 n n 
N HN3 TRS sing 349 n n 
O1 HO1 TRS sing 350 n n 
O2 HO2 TRS sing 351 n n 
O3 HO3 TRS sing 352 n n 
#
_atom_sites.entry_id                     1ID5 
_atom_sites.fract_transf_matrix[1][1]    0.011297 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006047 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012001 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 CA H 1 600 600 CA CA . 
E 5 TRS H 1 800 800 TRS TRS . 
F 6 HOH L 1 18 18 HOH HOH . 
F 6 HOH L 2 19 19 HOH HOH . 
F 6 HOH L 3 43 43 HOH HOH . 
F 6 HOH L 4 93 93 HOH HOH . 
G 6 HOH H 1 801 1 HOH HOH . 
G 6 HOH H 2 802 2 HOH HOH . 
G 6 HOH H 3 803 4 HOH HOH . 
G 6 HOH H 4 804 6 HOH HOH . 
G 6 HOH H 5 805 7 HOH HOH . 
G 6 HOH H 6 806 9 HOH HOH . 
G 6 HOH H 7 807 10 HOH HOH . 
G 6 HOH H 8 808 11 HOH HOH . 
G 6 HOH H 9 809 12 HOH HOH . 
G 6 HOH H 10 810 13 HOH HOH . 
G 6 HOH H 11 811 15 HOH HOH . 
G 6 HOH H 12 812 16 HOH HOH . 
G 6 HOH H 13 813 20 HOH HOH . 
G 6 HOH H 14 814 21 HOH HOH . 
G 6 HOH H 15 815 22 HOH HOH . 
G 6 HOH H 16 816 23 HOH HOH . 
G 6 HOH H 17 817 24 HOH HOH . 
G 6 HOH H 18 818 25 HOH HOH . 
G 6 HOH H 19 819 26 HOH HOH . 
G 6 HOH H 20 820 27 HOH HOH . 
G 6 HOH H 21 821 28 HOH HOH . 
G 6 HOH H 22 822 31 HOH HOH . 
G 6 HOH H 23 823 32 HOH HOH . 
G 6 HOH H 24 824 33 HOH HOH . 
G 6 HOH H 25 825 37 HOH HOH . 
G 6 HOH H 26 826 38 HOH HOH . 
G 6 HOH H 27 827 40 HOH HOH . 
G 6 HOH H 28 828 41 HOH HOH . 
G 6 HOH H 29 829 42 HOH HOH . 
G 6 HOH H 30 830 44 HOH HOH . 
G 6 HOH H 31 831 45 HOH HOH . 
G 6 HOH H 32 832 47 HOH HOH . 
G 6 HOH H 33 833 48 HOH HOH . 
G 6 HOH H 34 834 49 HOH HOH . 
G 6 HOH H 35 835 50 HOH HOH . 
G 6 HOH H 36 836 51 HOH HOH . 
G 6 HOH H 37 837 52 HOH HOH . 
G 6 HOH H 38 838 53 HOH HOH . 
G 6 HOH H 39 839 54 HOH HOH . 
G 6 HOH H 40 840 55 HOH HOH . 
G 6 HOH H 41 841 56 HOH HOH . 
G 6 HOH H 42 842 57 HOH HOH . 
G 6 HOH H 43 843 61 HOH HOH . 
G 6 HOH H 44 844 62 HOH HOH . 
G 6 HOH H 45 845 63 HOH HOH . 
G 6 HOH H 46 846 64 HOH HOH . 
G 6 HOH H 47 847 66 HOH HOH . 
G 6 HOH H 48 848 67 HOH HOH . 
G 6 HOH H 49 849 68 HOH HOH . 
G 6 HOH H 50 850 72 HOH HOH . 
G 6 HOH H 51 851 73 HOH HOH . 
G 6 HOH H 52 852 74 HOH HOH . 
G 6 HOH H 53 853 75 HOH HOH . 
G 6 HOH H 54 854 76 HOH HOH . 
G 6 HOH H 55 855 77 HOH HOH . 
G 6 HOH H 56 856 78 HOH HOH . 
G 6 HOH H 57 857 79 HOH HOH . 
G 6 HOH H 58 858 80 HOH HOH . 
G 6 HOH H 59 859 81 HOH HOH . 
G 6 HOH H 60 860 82 HOH HOH . 
G 6 HOH H 61 861 83 HOH HOH . 
G 6 HOH H 62 862 84 HOH HOH . 
G 6 HOH H 63 863 89 HOH HOH . 
G 6 HOH H 64 864 90 HOH HOH . 
G 6 HOH H 65 865 92 HOH HOH . 
G 6 HOH H 66 866 94 HOH HOH . 
G 6 HOH H 67 867 97 HOH HOH . 
G 6 HOH H 68 868 99 HOH HOH . 
G 6 HOH H 69 869 100 HOH HOH . 
G 6 HOH H 70 870 101 HOH HOH . 
G 6 HOH H 71 871 102 HOH HOH . 
G 6 HOH H 72 872 105 HOH HOH . 
G 6 HOH H 73 873 106 HOH HOH . 
G 6 HOH H 74 874 107 HOH HOH . 
G 6 HOH H 75 875 108 HOH HOH . 
G 6 HOH H 76 876 109 HOH HOH . 
G 6 HOH H 77 877 110 HOH HOH . 
G 6 HOH H 78 878 112 HOH HOH . 
G 6 HOH H 79 879 113 HOH HOH . 
H 6 HOH I 1 143 3 HOH HOH . 
H 6 HOH I 2 144 5 HOH HOH . 
H 6 HOH I 3 145 8 HOH HOH . 
H 6 HOH I 4 146 14 HOH HOH . 
H 6 HOH I 5 147 17 HOH HOH . 
H 6 HOH I 6 148 29 HOH HOH . 
H 6 HOH I 7 149 30 HOH HOH . 
H 6 HOH I 8 150 34 HOH HOH . 
H 6 HOH I 9 151 35 HOH HOH . 
H 6 HOH I 10 152 36 HOH HOH . 
H 6 HOH I 11 153 39 HOH HOH . 
H 6 HOH I 12 154 46 HOH HOH . 
H 6 HOH I 13 155 58 HOH HOH . 
H 6 HOH I 14 156 59 HOH HOH . 
H 6 HOH I 15 157 60 HOH HOH . 
H 6 HOH I 16 158 65 HOH HOH . 
H 6 HOH I 17 159 69 HOH HOH . 
H 6 HOH I 18 160 70 HOH HOH . 
H 6 HOH I 19 161 71 HOH HOH . 
H 6 HOH I 20 162 85 HOH HOH . 
H 6 HOH I 21 163 86 HOH HOH . 
H 6 HOH I 22 164 87 HOH HOH . 
H 6 HOH I 23 165 88 HOH HOH . 
H 6 HOH I 24 166 91 HOH HOH . 
H 6 HOH I 25 167 95 HOH HOH . 
H 6 HOH I 26 168 96 HOH HOH . 
H 6 HOH I 27 169 98 HOH HOH . 
H 6 HOH I 28 170 103 HOH HOH . 
H 6 HOH I 29 171 104 HOH HOH . 
H 6 HOH I 30 172 111 HOH HOH . 
H 6 HOH I 31 173 114 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C TRS . . . E 5 -0.716 -20.769 38.864 1 67.36 ? C TRS 800 H 1 
HETATM 2 C C1 TRS . . . E 5 0.352 -21.223 37.79 1 67.68 ? C1 TRS 800 H 1 
HETATM 3 C C2 TRS . . . E 5 -1.298 -22.131 39.369 1 66.33 ? C2 TRS 800 H 1 
HETATM 4 C C3 TRS . . . E 5 -1.926 -19.953 38.282 1 67.23 ? C3 TRS 800 H 1 
HETATM 5 N N TRS . . . E 5 0.087 -20.067 39.808 1 68.13 ? N TRS 800 H 1 
HETATM 6 O O1 TRS . . . E 5 -0.419 -21.333 36.563 1 64.68 ? O1 TRS 800 H 1 
HETATM 7 O O2 TRS . . . E 5 -1.47 -22.011 40.801 1 63.18 ? O2 TRS 800 H 1 
HETATM 8 O O3 TRS . . . E 5 -1.581 -18.59 37.839 1 66.35 ? O3 TRS 800 H 1 
#
_model_server_stats.io_time_ms              0 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           320 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           8 
#