data_1IDR # _model_server_result.job_id XcV9FEjNmfzbyCDscUk79g _model_server_result.datetime_utc '2025-03-28 02:02:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1idr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":303}' # _entry.id 1IDR # _exptl.entry_id 1IDR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1IDR _cell.length_a 44.8 _cell.length_b 62.248 _cell.length_c 91.02 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1IDR _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 81 A HIS 81 1_555 E FE HEM . A HEM 144 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.102 ? metalc ? metalc2 E FE HEM . A HEM 144 1_555 F O1 OXY . A OXY 145 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.199 ? metalc ? metalc3 E FE HEM . A HEM 144 1_555 F O2 OXY . A OXY 145 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.016 ? metalc ? metalc4 B NE2 HIS 81 B HIS 81 1_555 H FE HEM . B HEM 144 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.114 ? metalc ? metalc5 H FE HEM . B HEM 144 1_555 I O1 OXY . B OXY 145 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? metalc ? metalc6 H FE HEM . B HEM 144 1_555 I O2 OXY . B OXY 145 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.778 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 330 n n P O2 PO4 sing 331 n n P O3 PO4 sing 332 n n P O4 PO4 sing 333 n n # _atom_sites.entry_id 1IDR _atom_sites.fract_transf_matrix[1][1] 0.022321 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016065 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010987 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PO4 A 1 301 301 PO4 PO4 . D 2 PO4 A 1 302 302 PO4 PO4 . E 3 HEM A 1 144 144 HEM HEM . F 4 OXY A 1 145 145 OXY OXY . G 2 PO4 B 1 303 303 PO4 PO4 . H 3 HEM B 1 144 144 HEM HEM . I 4 OXY B 1 145 145 OXY OXY . J 5 HOH A 1 303 1 HOH HOH . J 5 HOH A 2 304 2 HOH HOH . J 5 HOH A 3 305 3 HOH HOH . J 5 HOH A 4 306 6 HOH HOH . J 5 HOH A 5 307 7 HOH HOH . J 5 HOH A 6 308 8 HOH HOH . J 5 HOH A 7 309 10 HOH HOH . J 5 HOH A 8 310 11 HOH HOH . J 5 HOH A 9 311 12 HOH HOH . J 5 HOH A 10 312 13 HOH HOH . J 5 HOH A 11 313 14 HOH HOH . J 5 HOH A 12 314 17 HOH HOH . J 5 HOH A 13 315 18 HOH HOH . J 5 HOH A 14 316 20 HOH HOH . J 5 HOH A 15 317 21 HOH HOH . J 5 HOH A 16 318 23 HOH HOH . J 5 HOH A 17 319 25 HOH HOH . J 5 HOH A 18 320 26 HOH HOH . J 5 HOH A 19 321 27 HOH HOH . J 5 HOH A 20 322 28 HOH HOH . J 5 HOH A 21 323 30 HOH HOH . J 5 HOH A 22 324 34 HOH HOH . J 5 HOH A 23 325 37 HOH HOH . J 5 HOH A 24 326 39 HOH HOH . J 5 HOH A 25 327 42 HOH HOH . J 5 HOH A 26 328 43 HOH HOH . J 5 HOH A 27 329 46 HOH HOH . J 5 HOH A 28 330 48 HOH HOH . J 5 HOH A 29 331 49 HOH HOH . J 5 HOH A 30 332 50 HOH HOH . J 5 HOH A 31 333 52 HOH HOH . J 5 HOH A 32 334 53 HOH HOH . J 5 HOH A 33 335 56 HOH HOH . J 5 HOH A 34 336 59 HOH HOH . J 5 HOH A 35 337 60 HOH HOH . J 5 HOH A 36 338 62 HOH HOH . J 5 HOH A 37 339 63 HOH HOH . J 5 HOH A 38 340 64 HOH HOH . J 5 HOH A 39 341 67 HOH HOH . J 5 HOH A 40 342 68 HOH HOH . J 5 HOH A 41 343 69 HOH HOH . J 5 HOH A 42 344 70 HOH HOH . J 5 HOH A 43 345 71 HOH HOH . J 5 HOH A 44 346 72 HOH HOH . J 5 HOH A 45 347 73 HOH HOH . J 5 HOH A 46 348 75 HOH HOH . J 5 HOH A 47 349 76 HOH HOH . J 5 HOH A 48 350 79 HOH HOH . J 5 HOH A 49 351 80 HOH HOH . J 5 HOH A 50 352 86 HOH HOH . J 5 HOH A 51 353 87 HOH HOH . J 5 HOH A 52 354 91 HOH HOH . J 5 HOH A 53 355 92 HOH HOH . J 5 HOH A 54 356 95 HOH HOH . J 5 HOH A 55 357 96 HOH HOH . J 5 HOH A 56 358 97 HOH HOH . J 5 HOH A 57 359 102 HOH HOH . J 5 HOH A 58 360 103 HOH HOH . J 5 HOH A 59 361 104 HOH HOH . J 5 HOH A 60 362 105 HOH HOH . J 5 HOH A 61 363 109 HOH HOH . J 5 HOH A 62 364 110 HOH HOH . J 5 HOH A 63 365 111 HOH HOH . J 5 HOH A 64 366 113 HOH HOH . J 5 HOH A 65 367 116 HOH HOH . J 5 HOH A 66 368 117 HOH HOH . J 5 HOH A 67 369 118 HOH HOH . J 5 HOH A 68 370 119 HOH HOH . J 5 HOH A 69 371 121 HOH HOH . J 5 HOH A 70 372 124 HOH HOH . J 5 HOH A 71 373 130 HOH HOH . J 5 HOH A 72 374 131 HOH HOH . J 5 HOH A 73 375 135 HOH HOH . J 5 HOH A 74 376 136 HOH HOH . J 5 HOH A 75 377 137 HOH HOH . J 5 HOH A 76 378 139 HOH HOH . J 5 HOH A 77 379 140 HOH HOH . J 5 HOH A 78 380 142 HOH HOH . J 5 HOH A 79 381 143 HOH HOH . J 5 HOH A 80 382 144 HOH HOH . J 5 HOH A 81 383 145 HOH HOH . J 5 HOH A 82 384 148 HOH HOH . J 5 HOH A 83 385 149 HOH HOH . J 5 HOH A 84 386 150 HOH HOH . J 5 HOH A 85 387 152 HOH HOH . J 5 HOH A 86 388 153 HOH HOH . J 5 HOH A 87 389 154 HOH HOH . J 5 HOH A 88 390 155 HOH HOH . J 5 HOH A 89 391 156 HOH HOH . J 5 HOH A 90 392 164 HOH HOH . J 5 HOH A 91 393 165 HOH HOH . J 5 HOH A 92 394 168 HOH HOH . J 5 HOH A 93 395 169 HOH HOH . J 5 HOH A 94 396 170 HOH HOH . J 5 HOH A 95 397 173 HOH HOH . J 5 HOH A 96 398 174 HOH HOH . J 5 HOH A 97 399 176 HOH HOH . J 5 HOH A 98 400 178 HOH HOH . J 5 HOH A 99 401 182 HOH HOH . J 5 HOH A 100 402 189 HOH HOH . J 5 HOH A 101 403 190 HOH HOH . J 5 HOH A 102 404 192 HOH HOH . J 5 HOH A 103 405 195 HOH HOH . J 5 HOH A 104 406 196 HOH HOH . J 5 HOH A 105 407 200 HOH HOH . J 5 HOH A 106 408 201 HOH HOH . J 5 HOH A 107 409 205 HOH HOH . J 5 HOH A 108 410 206 HOH HOH . J 5 HOH A 109 411 207 HOH HOH . J 5 HOH A 110 412 211 HOH HOH . J 5 HOH A 111 413 212 HOH HOH . J 5 HOH A 112 414 214 HOH HOH . J 5 HOH A 113 415 216 HOH HOH . J 5 HOH A 114 416 218 HOH HOH . J 5 HOH A 115 417 220 HOH HOH . J 5 HOH A 116 418 221 HOH HOH . J 5 HOH A 117 419 223 HOH HOH . J 5 HOH A 118 420 224 HOH HOH . J 5 HOH A 119 421 228 HOH HOH . K 5 HOH B 1 304 4 HOH HOH . K 5 HOH B 2 305 5 HOH HOH . K 5 HOH B 3 306 9 HOH HOH . K 5 HOH B 4 307 15 HOH HOH . K 5 HOH B 5 308 16 HOH HOH . K 5 HOH B 6 309 19 HOH HOH . K 5 HOH B 7 310 22 HOH HOH . K 5 HOH B 8 311 24 HOH HOH . K 5 HOH B 9 312 29 HOH HOH . K 5 HOH B 10 313 31 HOH HOH . K 5 HOH B 11 314 32 HOH HOH . K 5 HOH B 12 315 33 HOH HOH . K 5 HOH B 13 316 35 HOH HOH . K 5 HOH B 14 317 36 HOH HOH . K 5 HOH B 15 318 38 HOH HOH . K 5 HOH B 16 319 40 HOH HOH . K 5 HOH B 17 320 41 HOH HOH . K 5 HOH B 18 321 44 HOH HOH . K 5 HOH B 19 322 45 HOH HOH . K 5 HOH B 20 323 47 HOH HOH . K 5 HOH B 21 324 51 HOH HOH . K 5 HOH B 22 325 54 HOH HOH . K 5 HOH B 23 326 55 HOH HOH . K 5 HOH B 24 327 57 HOH HOH . K 5 HOH B 25 328 58 HOH HOH . K 5 HOH B 26 329 61 HOH HOH . K 5 HOH B 27 330 65 HOH HOH . K 5 HOH B 28 331 66 HOH HOH . K 5 HOH B 29 332 74 HOH HOH . K 5 HOH B 30 333 77 HOH HOH . K 5 HOH B 31 334 78 HOH HOH . K 5 HOH B 32 335 81 HOH HOH . K 5 HOH B 33 336 82 HOH HOH . K 5 HOH B 34 337 83 HOH HOH . K 5 HOH B 35 338 84 HOH HOH . K 5 HOH B 36 339 85 HOH HOH . K 5 HOH B 37 340 88 HOH HOH . K 5 HOH B 38 341 89 HOH HOH . K 5 HOH B 39 342 90 HOH HOH . K 5 HOH B 40 343 93 HOH HOH . K 5 HOH B 41 344 94 HOH HOH . K 5 HOH B 42 345 98 HOH HOH . K 5 HOH B 43 346 99 HOH HOH . K 5 HOH B 44 347 100 HOH HOH . K 5 HOH B 45 348 101 HOH HOH . K 5 HOH B 46 349 106 HOH HOH . K 5 HOH B 47 350 107 HOH HOH . K 5 HOH B 48 351 108 HOH HOH . K 5 HOH B 49 352 112 HOH HOH . K 5 HOH B 50 353 114 HOH HOH . K 5 HOH B 51 354 115 HOH HOH . K 5 HOH B 52 355 120 HOH HOH . K 5 HOH B 53 356 122 HOH HOH . K 5 HOH B 54 357 123 HOH HOH . K 5 HOH B 55 358 125 HOH HOH . K 5 HOH B 56 359 126 HOH HOH . K 5 HOH B 57 360 127 HOH HOH . K 5 HOH B 58 361 128 HOH HOH . K 5 HOH B 59 362 129 HOH HOH . K 5 HOH B 60 363 132 HOH HOH . K 5 HOH B 61 364 133 HOH HOH . K 5 HOH B 62 365 134 HOH HOH . K 5 HOH B 63 366 138 HOH HOH . K 5 HOH B 64 367 141 HOH HOH . K 5 HOH B 65 368 146 HOH HOH . K 5 HOH B 66 369 147 HOH HOH . K 5 HOH B 67 370 151 HOH HOH . K 5 HOH B 68 371 157 HOH HOH . K 5 HOH B 69 372 158 HOH HOH . K 5 HOH B 70 373 159 HOH HOH . K 5 HOH B 71 374 160 HOH HOH . K 5 HOH B 72 375 161 HOH HOH . K 5 HOH B 73 376 162 HOH HOH . K 5 HOH B 74 377 163 HOH HOH . K 5 HOH B 75 378 166 HOH HOH . K 5 HOH B 76 379 167 HOH HOH . K 5 HOH B 77 380 171 HOH HOH . K 5 HOH B 78 381 172 HOH HOH . K 5 HOH B 79 382 175 HOH HOH . K 5 HOH B 80 383 177 HOH HOH . K 5 HOH B 81 384 179 HOH HOH . K 5 HOH B 82 385 180 HOH HOH . K 5 HOH B 83 386 181 HOH HOH . K 5 HOH B 84 387 183 HOH HOH . K 5 HOH B 85 388 184 HOH HOH . K 5 HOH B 86 389 185 HOH HOH . K 5 HOH B 87 390 186 HOH HOH . K 5 HOH B 88 391 187 HOH HOH . K 5 HOH B 89 392 188 HOH HOH . K 5 HOH B 90 393 191 HOH HOH . K 5 HOH B 91 394 193 HOH HOH . K 5 HOH B 92 395 194 HOH HOH . K 5 HOH B 93 396 197 HOH HOH . K 5 HOH B 94 397 198 HOH HOH . K 5 HOH B 95 398 199 HOH HOH . K 5 HOH B 96 399 202 HOH HOH . K 5 HOH B 97 400 203 HOH HOH . K 5 HOH B 98 401 204 HOH HOH . K 5 HOH B 99 402 208 HOH HOH . K 5 HOH B 100 403 209 HOH HOH . K 5 HOH B 101 404 210 HOH HOH . K 5 HOH B 102 405 213 HOH HOH . K 5 HOH B 103 406 215 HOH HOH . K 5 HOH B 104 407 217 HOH HOH . K 5 HOH B 105 408 219 HOH HOH . K 5 HOH B 106 409 222 HOH HOH . K 5 HOH B 107 410 225 HOH HOH . K 5 HOH B 108 411 226 HOH HOH . K 5 HOH B 109 412 227 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . G 2 21.365 37.653 61.774 1 82 ? P PO4 303 B 1 HETATM 2 O O1 PO4 . . . G 2 22.579 38.312 62.383 1 38.97 ? O1 PO4 303 B 1 HETATM 3 O O2 PO4 . . . G 2 21.438 36.148 61.947 1 79.1 ? O2 PO4 303 B 1 HETATM 4 O O3 PO4 . . . G 2 20.135 38.195 62.462 1 72.59 ? O3 PO4 303 B 1 HETATM 5 O O4 PO4 . . . G 2 21.304 37.98 60.301 1 73.18 ? O4 PO4 303 B 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 317 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 5 #