data_1IFQ # _model_server_result.job_id gkyPJsO2BnnniOOMYMFJgw _model_server_result.datetime_utc '2025-01-11 14:42:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1ifq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":128}' # _entry.id 1IFQ # _exptl.entry_id 1IFQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1IFQ _cell.length_a 50.244 _cell.length_b 57.056 _cell.length_c 99.009 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1IFQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C THR 16 A THR 5 1_555 A N MSE 17 A MSE 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale2 A C MSE 17 A MSE 6 1_555 A N ILE 18 A ILE 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale3 A C SER 30 A SER 19 1_555 A N MSE 31 A MSE 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale4 A C MSE 31 A MSE 20 1_555 A N GLN 32 A GLN 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale5 A C ALA 69 A ALA 58 1_555 A N MSE 70 A MSE 59 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale6 A C MSE 70 A MSE 59 1_555 A N THR 71 A THR 60 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale7 B C THR 16 B THR 5 1_555 B N MSE 17 B MSE 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale8 B C MSE 17 B MSE 6 1_555 B N ILE 18 B ILE 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale9 B C SER 30 B SER 19 1_555 B N MSE 31 B MSE 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale10 B C MSE 31 B MSE 20 1_555 B N GLN 32 B GLN 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale11 B C ALA 69 B ALA 58 1_555 B N MSE 70 B MSE 59 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale12 B C MSE 70 B MSE 59 1_555 B N THR 71 B THR 60 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 1IFQ _atom_sites.fract_transf_matrix[1][1] 0.019903 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017527 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.0101 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GOL A 1 128 65 GOL GOL . D 2 GOL B 1 128 66 GOL GOL . E 3 HOH A 1 129 1 HOH HOH . E 3 HOH A 2 130 2 HOH HOH . E 3 HOH A 3 131 3 HOH HOH . E 3 HOH A 4 132 4 HOH HOH . E 3 HOH A 5 133 5 HOH HOH . E 3 HOH A 6 134 7 HOH HOH . E 3 HOH A 7 135 9 HOH HOH . E 3 HOH A 8 136 11 HOH HOH . E 3 HOH A 9 137 12 HOH HOH . E 3 HOH A 10 138 13 HOH HOH . E 3 HOH A 11 139 15 HOH HOH . E 3 HOH A 12 140 16 HOH HOH . E 3 HOH A 13 141 17 HOH HOH . E 3 HOH A 14 142 19 HOH HOH . E 3 HOH A 15 143 20 HOH HOH . E 3 HOH A 16 144 21 HOH HOH . E 3 HOH A 17 145 24 HOH HOH . E 3 HOH A 18 146 27 HOH HOH . E 3 HOH A 19 147 28 HOH HOH . E 3 HOH A 20 148 29 HOH HOH . E 3 HOH A 21 149 31 HOH HOH . E 3 HOH A 22 150 32 HOH HOH . E 3 HOH A 23 151 37 HOH HOH . E 3 HOH A 24 152 38 HOH HOH . E 3 HOH A 25 153 39 HOH HOH . E 3 HOH A 26 154 41 HOH HOH . E 3 HOH A 27 155 44 HOH HOH . E 3 HOH A 28 156 45 HOH HOH . E 3 HOH A 29 157 49 HOH HOH . E 3 HOH A 30 158 51 HOH HOH . E 3 HOH A 31 159 55 HOH HOH . E 3 HOH A 32 160 58 HOH HOH . E 3 HOH A 33 161 61 HOH HOH . E 3 HOH A 34 162 62 HOH HOH . E 3 HOH A 35 163 63 HOH HOH . E 3 HOH A 36 164 64 HOH HOH . F 3 HOH B 1 129 6 HOH HOH . F 3 HOH B 2 130 8 HOH HOH . F 3 HOH B 3 131 10 HOH HOH . F 3 HOH B 4 132 14 HOH HOH . F 3 HOH B 5 133 18 HOH HOH . F 3 HOH B 6 134 22 HOH HOH . F 3 HOH B 7 135 23 HOH HOH . F 3 HOH B 8 136 25 HOH HOH . F 3 HOH B 9 137 26 HOH HOH . F 3 HOH B 10 138 30 HOH HOH . F 3 HOH B 11 139 33 HOH HOH . F 3 HOH B 12 140 34 HOH HOH . F 3 HOH B 13 141 35 HOH HOH . F 3 HOH B 14 142 36 HOH HOH . F 3 HOH B 15 143 40 HOH HOH . F 3 HOH B 16 144 42 HOH HOH . F 3 HOH B 17 145 43 HOH HOH . F 3 HOH B 18 146 46 HOH HOH . F 3 HOH B 19 147 47 HOH HOH . F 3 HOH B 20 148 48 HOH HOH . F 3 HOH B 21 149 50 HOH HOH . F 3 HOH B 22 150 52 HOH HOH . F 3 HOH B 23 151 53 HOH HOH . F 3 HOH B 24 152 54 HOH HOH . F 3 HOH B 25 153 56 HOH HOH . F 3 HOH B 26 154 57 HOH HOH . F 3 HOH B 27 155 59 HOH HOH . F 3 HOH B 28 156 60 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 2 31.098 11.587 2.945 1 81.79 ? C1 GOL 128 A 1 HETATM 2 O O1 GOL . . . C 2 31.987 11.651 4.048 1 80.71 ? O1 GOL 128 A 1 HETATM 3 C C2 GOL . . . C 2 31.841 11.864 1.636 1 81.92 ? C2 GOL 128 A 1 HETATM 4 O O2 GOL . . . C 2 30.931 11.773 0.533 1 81.29 ? O2 GOL 128 A 1 HETATM 5 C C3 GOL . . . C 2 32.973 10.854 1.446 1 81.5 ? C3 GOL 128 A 1 HETATM 6 O O3 GOL . . . C 2 33.744 11.172 0.301 1 81.72 ? O3 GOL 128 A 1 # _model_server_stats.io_time_ms 57 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 335 _model_server_stats.encode_time_ms 12 _model_server_stats.element_count 6 #