data_1IHI # _model_server_result.job_id oOxttsRc2JYWj2jJNVbnxQ _model_server_result.datetime_utc '2024-10-13 04:20:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1ihi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":324}' # _entry.id 1IHI # _exptl.entry_id 1IHI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 743.405 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1IHI _cell.length_a 144.09 _cell.length_b 144.09 _cell.length_c 202.77 _cell.Z_PDB 36 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1IHI _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'H 3 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D 1 1 B,E,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # _chem_comp.formula 'C21 H28 N7 O17 P3' _chem_comp.formula_weight 743.405 _chem_comp.id NAP _chem_comp.mon_nstd_flag . _chem_comp.name 'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms "2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE" # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A NAP doub 306 n n PA O2A NAP sing 307 n n PA O5B NAP sing 308 n n PA O3 NAP sing 309 n n O2A HOA2 NAP sing 310 n n O5B C5B NAP sing 311 n n C5B C4B NAP sing 312 n n C5B H51A NAP sing 313 n n C5B H52A NAP sing 314 n n C4B O4B NAP sing 315 n n C4B C3B NAP sing 316 n n C4B H4B NAP sing 317 n n O4B C1B NAP sing 318 n n C3B O3B NAP sing 319 n n C3B C2B NAP sing 320 n n C3B H3B NAP sing 321 n n O3B HO3A NAP sing 322 n n C2B O2B NAP sing 323 n n C2B C1B NAP sing 324 n n C2B H2B NAP sing 325 n n O2B P2B NAP sing 326 n n C1B N9A NAP sing 327 n n C1B H1B NAP sing 328 n n N9A C8A NAP sing 329 n y N9A C4A NAP sing 330 n y C8A N7A NAP doub 331 n y C8A H8A NAP sing 332 n n N7A C5A NAP sing 333 n y C5A C6A NAP sing 334 n y C5A C4A NAP doub 335 n y C6A N6A NAP sing 336 n n C6A N1A NAP doub 337 n y N6A H61A NAP sing 338 n n N6A H62A NAP sing 339 n n N1A C2A NAP sing 340 n y C2A N3A NAP doub 341 n y C2A H2A NAP sing 342 n n N3A C4A NAP sing 343 n y O3 PN NAP sing 344 n n PN O1N NAP doub 345 n n PN O2N NAP sing 346 n n PN O5D NAP sing 347 n n O5D C5D NAP sing 348 n n C5D C4D NAP sing 349 n n C5D H51N NAP sing 350 n n C5D H52N NAP sing 351 n n C4D O4D NAP sing 352 n n C4D C3D NAP sing 353 n n C4D H4D NAP sing 354 n n O4D C1D NAP sing 355 n n C3D O3D NAP sing 356 n n C3D C2D NAP sing 357 n n C3D H3D NAP sing 358 n n O3D HO3N NAP sing 359 n n C2D O2D NAP sing 360 n n C2D C1D NAP sing 361 n n C2D H2D NAP sing 362 n n O2D HO2N NAP sing 363 n n C1D N1N NAP sing 364 n n C1D H1D NAP sing 365 n n N1N C2N NAP sing 366 n y N1N C6N NAP doub 367 n y C2N C3N NAP doub 368 n y C2N H2N NAP sing 369 n n C3N C7N NAP sing 370 n n C3N C4N NAP sing 371 n y C7N O7N NAP doub 372 n n C7N N7N NAP sing 373 n n N7N H71N NAP sing 374 n n N7N H72N NAP sing 375 n n C4N C5N NAP doub 376 n y C4N H4N NAP sing 377 n n C5N C6N NAP sing 378 n y C5N H5N NAP sing 379 n n C6N H6N NAP sing 380 n n P2B O1X NAP doub 381 n n P2B O2X NAP sing 382 n n P2B O3X NAP sing 383 n n O2X HOP2 NAP sing 384 n n O3X HOP3 NAP sing 385 n n # _atom_sites.entry_id 1IHI _atom_sites.fract_transf_matrix[1][1] 0.00694 _atom_sites.fract_transf_matrix[1][2] 0.004007 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008014 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004932 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NAP A 1 324 324 NAP NAP . D 3 IU5 A 1 326 326 IU5 URS . E 2 NAP B 1 325 325 NAP NAP . F 3 IU5 B 1 327 327 IU5 URS . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NAP . . . C 2 4.432 43.058 28.117 1 16.82 ? PA NAP 324 A 1 HETATM 2 O O1A NAP . . . C 2 5.763 42.912 27.524 1 15.85 ? O1A NAP 324 A 1 HETATM 3 O O2A NAP . . . C 2 3.263 43.294 27.318 1 18.58 ? O2A NAP 324 A 1 HETATM 4 O O5B NAP . . . C 2 4.535 44.213 29.294 1 16.07 ? O5B NAP 324 A 1 HETATM 5 C C5B NAP . . . C 2 5.419 44.047 30.545 1 16.37 ? C5B NAP 324 A 1 HETATM 6 C C4B NAP . . . C 2 5.435 45.405 31.063 1 15.22 ? C4B NAP 324 A 1 HETATM 7 O O4B NAP . . . C 2 5.995 46.459 30.07 1 15.09 ? O4B NAP 324 A 1 HETATM 8 C C3B NAP . . . C 2 4.344 45.894 31.516 1 15.11 ? C3B NAP 324 A 1 HETATM 9 O O3B NAP . . . C 2 4.064 45.484 32.811 1 15.08 ? O3B NAP 324 A 1 HETATM 10 C C2B NAP . . . C 2 4.4 47.406 31.481 1 15.4 ? C2B NAP 324 A 1 HETATM 11 O O2B NAP . . . C 2 4.474 48.003 32.64 1 15.6 ? O2B NAP 324 A 1 HETATM 12 C C1B NAP . . . C 2 5.492 47.723 30.55 1 15.4 ? C1B NAP 324 A 1 HETATM 13 N N9A NAP . . . C 2 5.067 48.62 29.418 1 14.7 ? N9A NAP 324 A 1 HETATM 14 C C8A NAP . . . C 2 3.968 48.705 28.549 1 16.83 ? C8A NAP 324 A 1 HETATM 15 N N7A NAP . . . C 2 4.061 49.684 27.684 1 17.48 ? N7A NAP 324 A 1 HETATM 16 C C5A NAP . . . C 2 5.26 50.287 27.973 1 18 ? C5A NAP 324 A 1 HETATM 17 C C6A NAP . . . C 2 5.959 51.412 27.404 1 19.4 ? C6A NAP 324 A 1 HETATM 18 N N6A NAP . . . C 2 5.458 52.102 26.386 1 20.22 ? N6A NAP 324 A 1 HETATM 19 N N1A NAP . . . C 2 7.196 51.777 27.953 1 20.66 ? N1A NAP 324 A 1 HETATM 20 C C2A NAP . . . C 2 7.728 51.078 29 1 18.27 ? C2A NAP 324 A 1 HETATM 21 N N3A NAP . . . C 2 7.13 50.01 29.582 1 17.34 ? N3A NAP 324 A 1 HETATM 22 C C4A NAP . . . C 2 5.892 49.66 29.025 1 16.11 ? C4A NAP 324 A 1 HETATM 23 O O3 NAP . . . C 2 4.405 41.616 28.829 1 17.55 ? O3 NAP 324 A 1 HETATM 24 P PN NAP . . . C 2 3.232 40.628 29.42 1 17.71 ? PN NAP 324 A 1 HETATM 25 O O1N NAP . . . C 2 3.3 40.712 30.884 1 19.43 ? O1N NAP 324 A 1 HETATM 26 O O2N NAP . . . C 2 3.554 39.318 28.805 1 19.9 ? O2N NAP 324 A 1 HETATM 27 O O5D NAP . . . C 2 1.771 41.032 28.903 1 19.16 ? O5D NAP 324 A 1 HETATM 28 C C5D NAP . . . C 2 1.372 41.049 27.51 1 18.51 ? C5D NAP 324 A 1 HETATM 29 C C4D NAP . . . C 2 -0.008 40.395 27.352 1 18.79 ? C4D NAP 324 A 1 HETATM 30 O O4D NAP . . . C 2 0.113 39.183 26.587 1 20.87 ? O4D NAP 324 A 1 HETATM 31 C C3D NAP . . . C 2 -0.71 39.928 28.655 1 18.86 ? C3D NAP 324 A 1 HETATM 32 O O3D NAP . . . C 2 -1.402 40.947 29.416 1 16.38 ? O3D NAP 324 A 1 HETATM 33 C C2D NAP . . . C 2 -1.631 38.846 28.2 1 19.95 ? C2D NAP 324 A 1 HETATM 34 O O2D NAP . . . C 2 -2.921 39.28 27.815 1 18.59 ? O2D NAP 324 A 1 HETATM 35 C C1D NAP . . . C 2 -0.818 38.204 27.042 1 21.34 ? C1D NAP 324 A 1 HETATM 36 N N1N NAP . . . C 2 -0.135 36.935 27.432 1 21.89 ? N1N NAP 324 A 1 HETATM 37 C C2N NAP . . . C 2 -0.618 35.705 26.884 1 22.32 ? C2N NAP 324 A 1 HETATM 38 C C3N NAP . . . C 2 0.096 34.505 27.29 1 23.48 ? C3N NAP 324 A 1 HETATM 39 C C7N NAP . . . C 2 -0.283 33.176 26.82 1 24.05 ? C7N NAP 324 A 1 HETATM 40 O O7N NAP . . . C 2 0.332 32.157 27.174 1 25.01 ? O7N NAP 324 A 1 HETATM 41 N N7N NAP . . . C 2 -1.321 33.006 25.979 1 25.21 ? N7N NAP 324 A 1 HETATM 42 C C4N NAP . . . C 2 1.208 34.636 28.184 1 22.81 ? C4N NAP 324 A 1 HETATM 43 C C5N NAP . . . C 2 1.652 35.818 28.696 1 22.88 ? C5N NAP 324 A 1 HETATM 44 C C6N NAP . . . C 2 0.987 36.97 28.325 1 22.68 ? C6N NAP 324 A 1 HETATM 45 P P2B NAP . . . C 2 3.179 48.92 33.061 1 17.17 ? P2B NAP 324 A 1 HETATM 46 O O1X NAP . . . C 2 1.932 48.082 33.036 1 13.92 ? O1X NAP 324 A 1 HETATM 47 O O2X NAP . . . C 2 3.577 49.399 34.369 1 15.07 ? O2X NAP 324 A 1 HETATM 48 O O3X NAP . . . C 2 3.17 49.99 32.057 1 15.1 ? O3X NAP 324 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 287 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 48 #