data_1IHI # _model_server_result.job_id 7apjdgx_zbbdWgup-678Hg _model_server_result.datetime_utc '2024-11-23 18:33:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1ihi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":325}' # _entry.id 1IHI # _exptl.entry_id 1IHI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 743.405 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1IHI _cell.length_a 144.09 _cell.length_b 144.09 _cell.length_c 202.77 _cell.Z_PDB 36 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1IHI _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'H 3 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D 1 1 B,E,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # _chem_comp.formula 'C21 H28 N7 O17 P3' _chem_comp.formula_weight 743.405 _chem_comp.id NAP _chem_comp.mon_nstd_flag . _chem_comp.name 'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms "2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE" # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A NAP doub 306 n n PA O2A NAP sing 307 n n PA O5B NAP sing 308 n n PA O3 NAP sing 309 n n O2A HOA2 NAP sing 310 n n O5B C5B NAP sing 311 n n C5B C4B NAP sing 312 n n C5B H51A NAP sing 313 n n C5B H52A NAP sing 314 n n C4B O4B NAP sing 315 n n C4B C3B NAP sing 316 n n C4B H4B NAP sing 317 n n O4B C1B NAP sing 318 n n C3B O3B NAP sing 319 n n C3B C2B NAP sing 320 n n C3B H3B NAP sing 321 n n O3B HO3A NAP sing 322 n n C2B O2B NAP sing 323 n n C2B C1B NAP sing 324 n n C2B H2B NAP sing 325 n n O2B P2B NAP sing 326 n n C1B N9A NAP sing 327 n n C1B H1B NAP sing 328 n n N9A C8A NAP sing 329 n y N9A C4A NAP sing 330 n y C8A N7A NAP doub 331 n y C8A H8A NAP sing 332 n n N7A C5A NAP sing 333 n y C5A C6A NAP sing 334 n y C5A C4A NAP doub 335 n y C6A N6A NAP sing 336 n n C6A N1A NAP doub 337 n y N6A H61A NAP sing 338 n n N6A H62A NAP sing 339 n n N1A C2A NAP sing 340 n y C2A N3A NAP doub 341 n y C2A H2A NAP sing 342 n n N3A C4A NAP sing 343 n y O3 PN NAP sing 344 n n PN O1N NAP doub 345 n n PN O2N NAP sing 346 n n PN O5D NAP sing 347 n n O5D C5D NAP sing 348 n n C5D C4D NAP sing 349 n n C5D H51N NAP sing 350 n n C5D H52N NAP sing 351 n n C4D O4D NAP sing 352 n n C4D C3D NAP sing 353 n n C4D H4D NAP sing 354 n n O4D C1D NAP sing 355 n n C3D O3D NAP sing 356 n n C3D C2D NAP sing 357 n n C3D H3D NAP sing 358 n n O3D HO3N NAP sing 359 n n C2D O2D NAP sing 360 n n C2D C1D NAP sing 361 n n C2D H2D NAP sing 362 n n O2D HO2N NAP sing 363 n n C1D N1N NAP sing 364 n n C1D H1D NAP sing 365 n n N1N C2N NAP sing 366 n y N1N C6N NAP doub 367 n y C2N C3N NAP doub 368 n y C2N H2N NAP sing 369 n n C3N C7N NAP sing 370 n n C3N C4N NAP sing 371 n y C7N O7N NAP doub 372 n n C7N N7N NAP sing 373 n n N7N H71N NAP sing 374 n n N7N H72N NAP sing 375 n n C4N C5N NAP doub 376 n y C4N H4N NAP sing 377 n n C5N C6N NAP sing 378 n y C5N H5N NAP sing 379 n n C6N H6N NAP sing 380 n n P2B O1X NAP doub 381 n n P2B O2X NAP sing 382 n n P2B O3X NAP sing 383 n n O2X HOP2 NAP sing 384 n n O3X HOP3 NAP sing 385 n n # _atom_sites.entry_id 1IHI _atom_sites.fract_transf_matrix[1][1] 0.00694 _atom_sites.fract_transf_matrix[1][2] 0.004007 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008014 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004932 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NAP A 1 324 324 NAP NAP . D 3 IU5 A 1 326 326 IU5 URS . E 2 NAP B 1 325 325 NAP NAP . F 3 IU5 B 1 327 327 IU5 URS . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NAP . . . E 2 -0.908 46.897 -13.513 1 33.74 ? PA NAP 325 B 1 HETATM 2 O O1A NAP . . . E 2 0.395 46.246 -13.325 1 32.4 ? O1A NAP 325 B 1 HETATM 3 O O2A NAP . . . E 2 -1.774 47.237 -12.409 1 32.11 ? O2A NAP 325 B 1 HETATM 4 O O5B NAP . . . E 2 -1.75 45.995 -14.599 1 35.77 ? O5B NAP 325 B 1 HETATM 5 C C5B NAP . . . E 2 -1.272 45.773 -16.054 1 36.5 ? C5B NAP 325 B 1 HETATM 6 C C4B NAP . . . E 2 -2.139 44.666 -16.458 1 36.51 ? C4B NAP 325 B 1 HETATM 7 O O4B NAP . . . E 2 -2.008 43.394 -15.57 1 35.29 ? O4B NAP 325 B 1 HETATM 8 C C3B NAP . . . E 2 -3.4 44.888 -16.563 1 36.63 ? C3B NAP 325 B 1 HETATM 9 O O3B NAP . . . E 2 -3.761 45.498 -17.767 1 37.45 ? O3B NAP 325 B 1 HETATM 10 C C2B NAP . . . E 2 -4.157 43.595 -16.429 1 36.21 ? C2B NAP 325 B 1 HETATM 11 O O2B NAP . . . E 2 -4.721 43.157 -17.514 1 37.16 ? O2B NAP 325 B 1 HETATM 12 C C1B NAP . . . E 2 -3.218 42.658 -15.801 1 35 ? C1B NAP 325 B 1 HETATM 13 N N9A NAP . . . E 2 -3.745 42.042 -14.526 1 34.85 ? N9A NAP 325 B 1 HETATM 14 C C8A NAP . . . E 2 -4.442 42.49 -13.388 1 35.23 ? C8A NAP 325 B 1 HETATM 15 N N7A NAP . . . E 2 -4.663 41.543 -12.508 1 35.71 ? N7A NAP 325 B 1 HETATM 16 C C5A NAP . . . E 2 -4.103 40.411 -13.058 1 35.35 ? C5A NAP 325 B 1 HETATM 17 C C6A NAP . . . E 2 -3.998 39.044 -12.611 1 35.2 ? C6A NAP 325 B 1 HETATM 18 N N6A NAP . . . E 2 -4.499 38.652 -11.45 1 35.58 ? N6A NAP 325 B 1 HETATM 19 N N1A NAP . . . E 2 -3.352 38.121 -13.433 1 35.9 ? N1A NAP 325 B 1 HETATM 20 C C2A NAP . . . E 2 -2.825 38.505 -14.637 1 35.97 ? C2A NAP 325 B 1 HETATM 21 N N3A NAP . . . E 2 -2.882 39.772 -15.127 1 35.5 ? N3A NAP 325 B 1 HETATM 22 C C4A NAP . . . E 2 -3.538 40.686 -14.288 1 35.42 ? C4A NAP 325 B 1 HETATM 23 O O3 NAP . . . E 2 -0.33 48.198 -14.303 1 31.58 ? O3 NAP 325 B 1 HETATM 24 P PN NAP . . . E 2 -0.879 49.718 -14.626 1 28.17 ? PN NAP 325 B 1 HETATM 25 O O1N NAP . . . E 2 -1.258 49.737 -16.043 1 30.95 ? O1N NAP 325 B 1 HETATM 26 O O2N NAP . . . E 2 0.262 50.574 -14.217 1 28.94 ? O2N NAP 325 B 1 HETATM 27 O O5D NAP . . . E 2 -2.13 50.125 -13.712 1 26.42 ? O5D NAP 325 B 1 HETATM 28 C C5D NAP . . . E 2 -2.084 50.207 -12.263 1 23.64 ? C5D NAP 325 B 1 HETATM 29 C C4D NAP . . . E 2 -2.783 51.489 -11.783 1 21.93 ? C4D NAP 325 B 1 HETATM 30 O O4D NAP . . . E 2 -1.831 52.379 -11.166 1 22.3 ? O4D NAP 325 B 1 HETATM 31 C C3D NAP . . . E 2 -3.435 52.363 -12.88 1 20.84 ? C3D NAP 325 B 1 HETATM 32 O O3D NAP . . . E 2 -4.745 51.939 -13.31 1 21.27 ? O3D NAP 325 B 1 HETATM 33 C C2D NAP . . . E 2 -3.462 53.727 -12.294 1 20.51 ? C2D NAP 325 B 1 HETATM 34 O O2D NAP . . . E 2 -4.628 54.026 -11.562 1 18.83 ? O2D NAP 325 B 1 HETATM 35 C C1D NAP . . . E 2 -2.169 53.736 -11.44 1 20.74 ? C1D NAP 325 B 1 HETATM 36 N N1N NAP . . . E 2 -1.045 54.459 -12.087 1 20.66 ? N1N NAP 325 B 1 HETATM 37 C C2N NAP . . . E 2 -0.62 55.703 -11.527 1 21.66 ? C2N NAP 325 B 1 HETATM 38 C C3N NAP . . . E 2 0.502 56.353 -12.197 1 23.42 ? C3N NAP 325 B 1 HETATM 39 C C7N NAP . . . E 2 1.047 57.625 -11.744 1 23.79 ? C7N NAP 325 B 1 HETATM 40 O O7N NAP . . . E 2 2.002 58.17 -12.32 1 22.31 ? O7N NAP 325 B 1 HETATM 41 N N7N NAP . . . E 2 0.527 58.257 -10.675 1 26.1 ? N7N NAP 325 B 1 HETATM 42 C C4N NAP . . . E 2 1.088 55.717 -13.339 1 23.92 ? C4N NAP 325 B 1 HETATM 43 C C5N NAP . . . E 2 0.665 54.529 -13.859 1 22.92 ? C5N NAP 325 B 1 HETATM 44 C C6N NAP . . . E 2 -0.398 53.896 -13.237 1 22.16 ? C6N NAP 325 B 1 HETATM 45 P P2B NAP . . . E 2 -6.36 43.119 -17.498 1 37.83 ? P2B NAP 325 B 1 HETATM 46 O O1X NAP . . . E 2 -6.899 44.487 -17.205 1 36.84 ? O1X NAP 325 B 1 HETATM 47 O O2X NAP . . . E 2 -6.633 42.61 -18.827 1 37.05 ? O2X NAP 325 B 1 HETATM 48 O O3X NAP . . . E 2 -6.69 42.147 -16.444 1 36.08 ? O3X NAP 325 B 1 # _model_server_stats.io_time_ms 50 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 215 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 48 #