data_1II8 # _model_server_result.job_id VLki9ThCw19DyeLikq2t1A _model_server_result.datetime_utc '2024-11-05 00:26:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1ii8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1001}' # _entry.id 1II8 # _exptl.entry_id 1II8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1II8 _cell.length_a 99.531 _cell.length_b 99.531 _cell.length_c 116.407 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1II8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA tetrameric 4 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F 1 1 A,B,C,D,E,F 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_675 x-y+1,-y+2,-z+2/3 1 0 0 0 -1 0 0 0 -1 0 172.392749 77.604667 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 247 n n P O2 PO4 sing 248 n n P O3 PO4 sing 249 n n P O4 PO4 sing 250 n n # _atom_sites.entry_id 1II8 _atom_sites.fract_transf_matrix[1][1] 0.010047 _atom_sites.fract_transf_matrix[1][2] 0.005801 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011601 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008591 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 PO4 A 1 1001 1 PO4 PO4 . D 3 PO4 A 1 1003 3 PO4 PO4 . E 4 HOH A 1 1004 1 HOH HOH . E 4 HOH A 2 1005 6 HOH HOH . E 4 HOH A 3 1006 13 HOH HOH . E 4 HOH A 4 1007 14 HOH HOH . E 4 HOH A 5 1008 18 HOH HOH . E 4 HOH A 6 1009 24 HOH HOH . E 4 HOH A 7 1010 33 HOH HOH . E 4 HOH A 8 1011 37 HOH HOH . E 4 HOH A 9 1012 39 HOH HOH . E 4 HOH A 10 1013 41 HOH HOH . E 4 HOH A 11 1014 42 HOH HOH . E 4 HOH A 12 1015 44 HOH HOH . E 4 HOH A 13 1016 47 HOH HOH . E 4 HOH A 14 1017 48 HOH HOH . E 4 HOH A 15 1018 50 HOH HOH . E 4 HOH A 16 1019 51 HOH HOH . E 4 HOH A 17 1020 53 HOH HOH . E 4 HOH A 18 1021 56 HOH HOH . E 4 HOH A 19 1022 58 HOH HOH . E 4 HOH A 20 1023 63 HOH HOH . E 4 HOH A 21 1024 64 HOH HOH . E 4 HOH A 22 1025 65 HOH HOH . E 4 HOH A 23 1026 67 HOH HOH . E 4 HOH A 24 1027 69 HOH HOH . E 4 HOH A 25 1028 70 HOH HOH . E 4 HOH A 26 1029 74 HOH HOH . E 4 HOH A 27 1030 75 HOH HOH . E 4 HOH A 28 1031 78 HOH HOH . E 4 HOH A 29 1032 80 HOH HOH . E 4 HOH A 30 1033 81 HOH HOH . E 4 HOH A 31 1034 82 HOH HOH . E 4 HOH A 32 1035 87 HOH HOH . F 4 HOH B 1 2 2 HOH HOH . F 4 HOH B 2 7 7 HOH HOH . F 4 HOH B 3 15 15 HOH HOH . F 4 HOH B 4 19 19 HOH HOH . F 4 HOH B 5 21 21 HOH HOH . F 4 HOH B 6 25 25 HOH HOH . F 4 HOH B 7 26 26 HOH HOH . F 4 HOH B 8 27 27 HOH HOH . F 4 HOH B 9 35 35 HOH HOH . F 4 HOH B 10 36 36 HOH HOH . F 4 HOH B 11 38 38 HOH HOH . F 4 HOH B 12 40 40 HOH HOH . F 4 HOH B 13 43 43 HOH HOH . F 4 HOH B 14 45 45 HOH HOH . F 4 HOH B 15 49 49 HOH HOH . F 4 HOH B 16 52 52 HOH HOH . F 4 HOH B 17 54 54 HOH HOH . F 4 HOH B 18 55 55 HOH HOH . F 4 HOH B 19 57 57 HOH HOH . F 4 HOH B 20 59 59 HOH HOH . F 4 HOH B 21 60 60 HOH HOH . F 4 HOH B 22 61 61 HOH HOH . F 4 HOH B 23 68 68 HOH HOH . F 4 HOH B 24 71 71 HOH HOH . F 4 HOH B 25 72 72 HOH HOH . F 4 HOH B 26 77 77 HOH HOH . F 4 HOH B 27 79 79 HOH HOH . F 4 HOH B 28 83 83 HOH HOH . F 4 HOH B 29 84 84 HOH HOH . F 4 HOH B 30 85 85 HOH HOH . F 4 HOH B 31 86 86 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . C 3 -14.232 77.173 16.911 1 115.14 ? P PO4 1001 A 1 HETATM 2 O O1 PO4 . . . C 3 -14.605 78.558 17.286 1 116.59 ? O1 PO4 1001 A 1 HETATM 3 O O2 PO4 . . . C 3 -12.809 77.151 16.498 1 114.87 ? O2 PO4 1001 A 1 HETATM 4 O O3 PO4 . . . C 3 -14.423 76.272 18.081 1 113.37 ? O3 PO4 1001 A 1 HETATM 5 O O4 PO4 . . . C 3 -15.089 76.715 15.781 1 112.75 ? O4 PO4 1001 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 310 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 5 #