data_1IIK # _model_server_result.job_id ZJ7V1AGWLedNhh0uM9pCQg _model_server_result.datetime_utc '2025-02-27 02:34:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1iik # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":902}' # _entry.id 1IIK # _exptl.entry_id 1IIK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description BETA-MERCAPTOETHANOL _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1IIK _cell.length_a 43.288 _cell.length_b 85.288 _cell.length_c 64.781 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1IIK _symmetry.cell_setting orthorhombic _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 43.288 85.288 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 114 A CYS 114 1_555 C S2 BME . A BME 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.996 ? covale ? covale2 D S2 BME . A BME 903 1_555 E S2 BME . A BME 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? covale ? covale3 D C1 BME . A BME 903 1_555 E C2 BME . A BME 904 2_665 ? ? ? ? ? ? ? ? ? ? ? ? 1.563 ? covale ? covale4 D C1 BME . A BME 903 1_555 E O1 BME . A BME 904 2_665 ? ? ? ? ? ? ? ? ? ? ? ? 1.37 ? covale ? covale5 D C2 BME . A BME 903 1_555 E C1 BME . A BME 904 2_665 ? ? ? ? ? ? ? ? ? ? ? ? 1.494 ? covale ? covale6 D C2 BME . A BME 903 1_555 E S2 BME . A BME 904 2_665 ? ? ? ? ? ? ? ? ? ? ? ? 1.877 ? covale ? covale7 D O1 BME . A BME 903 1_555 E C1 BME . A BME 904 2_665 ? ? ? ? ? ? ? ? ? ? ? ? 1.452 ? covale ? covale8 D S2 BME . A BME 903 1_555 E C2 BME . A BME 904 2_665 ? ? ? ? ? ? ? ? ? ? ? ? 1.745 ? covale ? covale9 D C2 BME . A BME 903 2_665 E C1 BME . A BME 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.494 ? covale ? covale10 D O1 BME . A BME 903 2_665 E C1 BME . A BME 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.452 ? covale ? covale11 D S2 BME . A BME 903 2_665 E C2 BME . A BME 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.745 ? covale ? covale12 D C1 BME . A BME 903 2_665 E C2 BME . A BME 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.563 ? covale ? covale13 D C1 BME . A BME 903 2_665 E O1 BME . A BME 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.37 ? covale ? covale14 D C2 BME . A BME 903 2_665 E S2 BME . A BME 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.877 ? covale ? covale15 B SG CYS 114 B CYS 114 1_555 F S2 BME . B BME 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.933 ? covale ? covale16 G S2 BME . B BME 905 1_555 H S2 BME . B BME 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? covale ? covale17 G C1 BME . B BME 905 1_555 H O1 BME . B BME 906 2_665 ? ? ? ? ? ? ? ? ? ? ? ? 1.416 ? covale ? covale18 G C2 BME . B BME 905 1_555 H C1 BME . B BME 906 2_665 ? ? ? ? ? ? ? ? ? ? ? ? 1.53 ? covale ? covale19 G C2 BME . B BME 905 1_555 H S2 BME . B BME 906 2_665 ? ? ? ? ? ? ? ? ? ? ? ? 1.719 ? covale ? covale20 G O1 BME . B BME 905 1_555 H C1 BME . B BME 906 2_665 ? ? ? ? ? ? ? ? ? ? ? ? 1.404 ? covale ? covale21 G S2 BME . B BME 905 1_555 H C2 BME . B BME 906 2_665 ? ? ? ? ? ? ? ? ? ? ? ? 1.919 ? covale ? covale22 G C2 BME . B BME 905 2_665 H C1 BME . B BME 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.53 ? covale ? covale23 G O1 BME . B BME 905 2_665 H C1 BME . B BME 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.404 ? covale ? covale24 G S2 BME . B BME 905 2_665 H C2 BME . B BME 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.919 ? covale ? covale25 G C1 BME . B BME 905 2_665 H C2 BME . B BME 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.514 ? covale ? covale26 G C1 BME . B BME 905 2_665 H O1 BME . B BME 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.416 ? covale ? covale27 G C2 BME . B BME 905 2_665 H S2 BME . B BME 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.719 ? covale ? covale28 G C1 BME . B BME 905 1_555 H C2 BME . B BME 906 2_665 ? ? ? ? ? ? ? ? ? ? ? ? 1.514 ? # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id BME _chem_comp.mon_nstd_flag . _chem_comp.name BETA-MERCAPTOETHANOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 BME sing 70 n n C1 O1 BME sing 71 n n C1 H11 BME sing 72 n n C1 H12 BME sing 73 n n C2 S2 BME sing 74 n n C2 H21 BME sing 75 n n C2 H22 BME sing 76 n n O1 HO1 BME sing 77 n n S2 HS2 BME sing 78 n n # _atom_sites.entry_id 1IIK _atom_sites.fract_transf_matrix[1][1] 0.023101 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011725 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015437 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 BME A 1 901 901 BME BME . D 2 BME A 1 903 903 BME BME . E 2 BME A 1 904 904 BME BME . F 2 BME B 1 902 902 BME BME . G 2 BME B 1 905 905 BME BME . H 2 BME B 1 906 906 BME BME . I 3 HOH A 1 905 1 HOH HOH . I 3 HOH A 2 906 2 HOH HOH . I 3 HOH A 3 907 3 HOH HOH . I 3 HOH A 4 908 4 HOH HOH . I 3 HOH A 5 909 9 HOH HOH . I 3 HOH A 6 910 10 HOH HOH . I 3 HOH A 7 911 13 HOH HOH . I 3 HOH A 8 912 15 HOH HOH . I 3 HOH A 9 913 18 HOH HOH . I 3 HOH A 10 914 20 HOH HOH . I 3 HOH A 11 915 21 HOH HOH . I 3 HOH A 12 916 23 HOH HOH . I 3 HOH A 13 917 27 HOH HOH . I 3 HOH A 14 918 31 HOH HOH . I 3 HOH A 15 919 32 HOH HOH . I 3 HOH A 16 920 37 HOH HOH . I 3 HOH A 17 921 38 HOH HOH . I 3 HOH A 18 922 39 HOH HOH . I 3 HOH A 19 923 40 HOH HOH . I 3 HOH A 20 924 41 HOH HOH . I 3 HOH A 21 925 43 HOH HOH . I 3 HOH A 22 926 44 HOH HOH . I 3 HOH A 23 927 47 HOH HOH . I 3 HOH A 24 928 49 HOH HOH . I 3 HOH A 25 929 53 HOH HOH . I 3 HOH A 26 930 55 HOH HOH . I 3 HOH A 27 931 56 HOH HOH . I 3 HOH A 28 932 57 HOH HOH . I 3 HOH A 29 933 58 HOH HOH . I 3 HOH A 30 934 63 HOH HOH . I 3 HOH A 31 935 64 HOH HOH . I 3 HOH A 32 936 65 HOH HOH . I 3 HOH A 33 937 66 HOH HOH . I 3 HOH A 34 938 67 HOH HOH . I 3 HOH A 35 939 68 HOH HOH . I 3 HOH A 36 940 70 HOH HOH . I 3 HOH A 37 941 73 HOH HOH . I 3 HOH A 38 942 76 HOH HOH . I 3 HOH A 39 943 78 HOH HOH . I 3 HOH A 40 944 79 HOH HOH . I 3 HOH A 41 945 80 HOH HOH . I 3 HOH A 42 946 82 HOH HOH . I 3 HOH A 43 947 84 HOH HOH . I 3 HOH A 44 948 85 HOH HOH . I 3 HOH A 45 949 88 HOH HOH . I 3 HOH A 46 950 90 HOH HOH . I 3 HOH A 47 951 91 HOH HOH . I 3 HOH A 48 952 96 HOH HOH . I 3 HOH A 49 953 97 HOH HOH . I 3 HOH A 50 954 101 HOH HOH . I 3 HOH A 51 955 104 HOH HOH . I 3 HOH A 52 956 106 HOH HOH . I 3 HOH A 53 957 107 HOH HOH . I 3 HOH A 54 958 108 HOH HOH . I 3 HOH A 55 959 110 HOH HOH . I 3 HOH A 56 960 112 HOH HOH . I 3 HOH A 57 961 114 HOH HOH . I 3 HOH A 58 962 117 HOH HOH . I 3 HOH A 59 963 119 HOH HOH . I 3 HOH A 60 964 120 HOH HOH . I 3 HOH A 61 965 121 HOH HOH . I 3 HOH A 62 966 122 HOH HOH . I 3 HOH A 63 967 123 HOH HOH . I 3 HOH A 64 968 124 HOH HOH . I 3 HOH A 65 969 127 HOH HOH . I 3 HOH A 66 970 129 HOH HOH . I 3 HOH A 67 971 132 HOH HOH . I 3 HOH A 68 972 134 HOH HOH . I 3 HOH A 69 973 139 HOH HOH . I 3 HOH A 70 974 140 HOH HOH . I 3 HOH A 71 975 141 HOH HOH . I 3 HOH A 72 976 142 HOH HOH . I 3 HOH A 73 977 145 HOH HOH . I 3 HOH A 74 978 146 HOH HOH . I 3 HOH A 75 979 147 HOH HOH . I 3 HOH A 76 980 156 HOH HOH . I 3 HOH A 77 981 158 HOH HOH . I 3 HOH A 78 982 161 HOH HOH . I 3 HOH A 79 983 162 HOH HOH . I 3 HOH A 80 984 167 HOH HOH . I 3 HOH A 81 985 168 HOH HOH . I 3 HOH A 82 986 169 HOH HOH . I 3 HOH A 83 987 170 HOH HOH . I 3 HOH A 84 988 171 HOH HOH . I 3 HOH A 85 989 175 HOH HOH . I 3 HOH A 86 990 177 HOH HOH . I 3 HOH A 87 991 178 HOH HOH . I 3 HOH A 88 992 179 HOH HOH . I 3 HOH A 89 993 184 HOH HOH . I 3 HOH A 90 994 186 HOH HOH . I 3 HOH A 91 995 187 HOH HOH . I 3 HOH A 92 996 188 HOH HOH . I 3 HOH A 93 997 189 HOH HOH . I 3 HOH A 94 998 190 HOH HOH . I 3 HOH A 95 999 191 HOH HOH . I 3 HOH A 96 1000 192 HOH HOH . I 3 HOH A 97 1001 194 HOH HOH . I 3 HOH A 98 1002 195 HOH HOH . I 3 HOH A 99 1003 196 HOH HOH . I 3 HOH A 100 1004 197 HOH HOH . I 3 HOH A 101 1005 204 HOH HOH . I 3 HOH A 102 1006 205 HOH HOH . I 3 HOH A 103 1007 206 HOH HOH . J 3 HOH B 1 907 5 HOH HOH . J 3 HOH B 2 908 6 HOH HOH . J 3 HOH B 3 909 8 HOH HOH . J 3 HOH B 4 910 12 HOH HOH . J 3 HOH B 5 911 14 HOH HOH . J 3 HOH B 6 912 16 HOH HOH . J 3 HOH B 7 913 17 HOH HOH . J 3 HOH B 8 914 19 HOH HOH . J 3 HOH B 9 915 22 HOH HOH . J 3 HOH B 10 916 24 HOH HOH . J 3 HOH B 11 917 29 HOH HOH . J 3 HOH B 12 918 30 HOH HOH . J 3 HOH B 13 919 34 HOH HOH . J 3 HOH B 14 920 42 HOH HOH . J 3 HOH B 15 921 45 HOH HOH . J 3 HOH B 16 922 46 HOH HOH . J 3 HOH B 17 923 48 HOH HOH . J 3 HOH B 18 924 50 HOH HOH . J 3 HOH B 19 925 51 HOH HOH . J 3 HOH B 20 926 52 HOH HOH . J 3 HOH B 21 927 54 HOH HOH . J 3 HOH B 22 928 59 HOH HOH . J 3 HOH B 23 929 60 HOH HOH . J 3 HOH B 24 930 61 HOH HOH . J 3 HOH B 25 931 62 HOH HOH . J 3 HOH B 26 932 69 HOH HOH . J 3 HOH B 27 933 71 HOH HOH . J 3 HOH B 28 934 72 HOH HOH . J 3 HOH B 29 935 74 HOH HOH . J 3 HOH B 30 936 75 HOH HOH . J 3 HOH B 31 937 77 HOH HOH . J 3 HOH B 32 938 81 HOH HOH . J 3 HOH B 33 939 83 HOH HOH . J 3 HOH B 34 940 86 HOH HOH . J 3 HOH B 35 941 87 HOH HOH . J 3 HOH B 36 942 89 HOH HOH . J 3 HOH B 37 943 92 HOH HOH . J 3 HOH B 38 944 93 HOH HOH . J 3 HOH B 39 945 94 HOH HOH . J 3 HOH B 40 946 95 HOH HOH . J 3 HOH B 41 947 98 HOH HOH . J 3 HOH B 42 948 99 HOH HOH . J 3 HOH B 43 949 100 HOH HOH . J 3 HOH B 44 950 102 HOH HOH . J 3 HOH B 45 951 103 HOH HOH . J 3 HOH B 46 952 105 HOH HOH . J 3 HOH B 47 953 109 HOH HOH . J 3 HOH B 48 954 111 HOH HOH . J 3 HOH B 49 955 113 HOH HOH . J 3 HOH B 50 956 115 HOH HOH . J 3 HOH B 51 957 116 HOH HOH . J 3 HOH B 52 958 118 HOH HOH . J 3 HOH B 53 959 125 HOH HOH . J 3 HOH B 54 960 126 HOH HOH . J 3 HOH B 55 961 128 HOH HOH . J 3 HOH B 56 962 130 HOH HOH . J 3 HOH B 57 963 131 HOH HOH . J 3 HOH B 58 964 133 HOH HOH . J 3 HOH B 59 965 135 HOH HOH . J 3 HOH B 60 966 136 HOH HOH . J 3 HOH B 61 967 137 HOH HOH . J 3 HOH B 62 968 138 HOH HOH . J 3 HOH B 63 969 143 HOH HOH . J 3 HOH B 64 970 144 HOH HOH . J 3 HOH B 65 971 148 HOH HOH . J 3 HOH B 66 972 149 HOH HOH . J 3 HOH B 67 973 150 HOH HOH . J 3 HOH B 68 974 151 HOH HOH . J 3 HOH B 69 975 152 HOH HOH . J 3 HOH B 70 976 153 HOH HOH . J 3 HOH B 71 977 154 HOH HOH . J 3 HOH B 72 978 155 HOH HOH . J 3 HOH B 73 979 157 HOH HOH . J 3 HOH B 74 980 159 HOH HOH . J 3 HOH B 75 981 160 HOH HOH . J 3 HOH B 76 982 163 HOH HOH . J 3 HOH B 77 983 164 HOH HOH . J 3 HOH B 78 984 165 HOH HOH . J 3 HOH B 79 985 166 HOH HOH . J 3 HOH B 80 986 172 HOH HOH . J 3 HOH B 81 987 173 HOH HOH . J 3 HOH B 82 988 174 HOH HOH . J 3 HOH B 83 989 176 HOH HOH . J 3 HOH B 84 990 180 HOH HOH . J 3 HOH B 85 991 181 HOH HOH . J 3 HOH B 86 992 182 HOH HOH . J 3 HOH B 87 993 183 HOH HOH . J 3 HOH B 88 994 185 HOH HOH . J 3 HOH B 89 995 193 HOH HOH . J 3 HOH B 90 996 198 HOH HOH . J 3 HOH B 91 997 199 HOH HOH . J 3 HOH B 92 998 200 HOH HOH . J 3 HOH B 93 999 201 HOH HOH . J 3 HOH B 94 1000 202 HOH HOH . J 3 HOH B 95 1001 203 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BME . . . F 2 7.047 35.341 41.285 0.6 27.82 ? C1 BME 902 B 1 HETATM 2 C C2 BME . . . F 2 7.435 36.548 42.112 0.6 27.94 ? C2 BME 902 B 1 HETATM 3 O O1 BME . . . F 2 6.752 34.289 42.172 0.6 28.36 ? O1 BME 902 B 1 HETATM 4 S S2 BME . . . F 2 8.858 36.039 43.095 0.6 27.72 ? S2 BME 902 B 1 # _model_server_stats.io_time_ms 31 _model_server_stats.parse_time_ms 28 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 874 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 4 #