data_1IIU
#
_model_server_result.job_id            '_m2yDTWmtXmbCfn4iKsGaA' 
_model_server_result.datetime_utc      '2025-03-09 02:23:43' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1iiu 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":176}' 
#
_entry.id    1IIU 
#
_exptl.entry_id    1IIU 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              286.452 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            RETINOL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1IIU 
_cell.length_a            46.064 
_cell.length_b            53.56 
_cell.length_c            73.414 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1IIU 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 3 A CYS 4 1_555 A SG CYS 159 A CYS 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf2 A SG CYS 69 A CYS 70 1_555 A SG CYS 173 A CYS 174 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
disulf ? disulf3 A SG CYS 119 A CYS 120 1_555 A SG CYS 128 A CYS 129 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? 
metalc ? metalc1 A OE1 GLU 32 A GLU 33 1_555 B CD CD . A CD 177 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.55 ? 
metalc ? metalc2 A OE2 GLU 32 A GLU 33 1_555 B CD CD . A CD 177 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.015 ? 
metalc ? metalc3 A OD1 ASP 139 A ASP 140 3_544 B CD CD . A CD 177 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.859 ? 
metalc ? metalc4 A OD2 ASP 139 A ASP 140 3_544 B CD CD . A CD 177 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.593 ? 
metalc ? metalc5 A NZ LYS 141 A LYS 142 3_544 B CD CD . A CD 177 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.559 ? 
metalc ? metalc6 B CD CD . A CD 177 1_555 D O HOH . A HOH 260 3_544 ? ? ? ? ? ? ? ? ? ? ? ? 2.718 ? 
#
_chem_comp.formula           'C20 H30 O' 
_chem_comp.formula_weight    286.452 
_chem_comp.id                RTL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              RETINOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 RTL sing 277 n n 
C1 C6 RTL sing 278 n n 
C1 C16 RTL sing 279 n n 
C1 C17 RTL sing 280 n n 
C2 C3 RTL sing 281 n n 
C2 H21 RTL sing 282 n n 
C2 H22 RTL sing 283 n n 
C3 C4 RTL sing 284 n n 
C3 H31 RTL sing 285 n n 
C3 H32 RTL sing 286 n n 
C4 C5 RTL sing 287 n n 
C4 H41 RTL sing 288 n n 
C4 H42 RTL sing 289 n n 
C5 C6 RTL doub 290 n n 
C5 C18 RTL sing 291 n n 
C6 C7 RTL sing 292 n n 
C7 C8 RTL doub 293 e n 
C7 H7 RTL sing 294 n n 
C8 C9 RTL sing 295 n n 
C8 H8 RTL sing 296 n n 
C9 C10 RTL doub 297 e n 
C9 C19 RTL sing 298 n n 
C10 C11 RTL sing 299 n n 
C10 H10 RTL sing 300 n n 
C11 C12 RTL doub 301 e n 
C11 H11 RTL sing 302 n n 
C12 C13 RTL sing 303 n n 
C12 H12 RTL sing 304 n n 
C13 C14 RTL doub 305 e n 
C13 C20 RTL sing 306 n n 
C14 C15 RTL sing 307 n n 
C14 H14 RTL sing 308 n n 
C15 O1 RTL sing 309 n n 
C15 H151 RTL sing 310 n n 
C15 H152 RTL sing 311 n n 
O1 HO1 RTL sing 312 n n 
C16 H161 RTL sing 313 n n 
C16 H162 RTL sing 314 n n 
C16 H163 RTL sing 315 n n 
C17 H171 RTL sing 316 n n 
C17 H172 RTL sing 317 n n 
C17 H173 RTL sing 318 n n 
C18 H181 RTL sing 319 n n 
C18 H182 RTL sing 320 n n 
C18 H183 RTL sing 321 n n 
C19 H191 RTL sing 322 n n 
C19 H192 RTL sing 323 n n 
C19 H193 RTL sing 324 n n 
C20 H201 RTL sing 325 n n 
C20 H202 RTL sing 326 n n 
C20 H203 RTL sing 327 n n 
#
_atom_sites.entry_id                     1IIU 
_atom_sites.fract_transf_matrix[1][1]    0.021709 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.018671 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013621 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 CD A 1 177 177 CD CD . 
C 3 RTL A 1 176 176 RTL RTL . 
D 4 HOH A 1 178 178 HOH HOH . 
D 4 HOH A 2 179 179 HOH HOH . 
D 4 HOH A 3 180 180 HOH HOH . 
D 4 HOH A 4 181 181 HOH HOH . 
D 4 HOH A 5 182 182 HOH HOH . 
D 4 HOH A 6 183 183 HOH HOH . 
D 4 HOH A 7 184 184 HOH HOH . 
D 4 HOH A 8 185 185 HOH HOH . 
D 4 HOH A 9 186 186 HOH HOH . 
D 4 HOH A 10 187 187 HOH HOH . 
D 4 HOH A 11 188 188 HOH HOH . 
D 4 HOH A 12 189 189 HOH HOH . 
D 4 HOH A 13 190 190 HOH HOH . 
D 4 HOH A 14 191 191 HOH HOH . 
D 4 HOH A 15 192 192 HOH HOH . 
D 4 HOH A 16 193 193 HOH HOH . 
D 4 HOH A 17 194 194 HOH HOH . 
D 4 HOH A 18 195 195 HOH HOH . 
D 4 HOH A 19 196 196 HOH HOH . 
D 4 HOH A 20 197 197 HOH HOH . 
D 4 HOH A 21 198 198 HOH HOH . 
D 4 HOH A 22 199 199 HOH HOH . 
D 4 HOH A 23 200 200 HOH HOH . 
D 4 HOH A 24 201 201 HOH HOH . 
D 4 HOH A 25 202 202 HOH HOH . 
D 4 HOH A 26 203 203 HOH HOH . 
D 4 HOH A 27 204 204 HOH HOH . 
D 4 HOH A 28 205 205 HOH HOH . 
D 4 HOH A 29 206 206 HOH HOH . 
D 4 HOH A 30 207 207 HOH HOH . 
D 4 HOH A 31 208 208 HOH HOH . 
D 4 HOH A 32 209 209 HOH HOH . 
D 4 HOH A 33 210 210 HOH HOH . 
D 4 HOH A 34 211 211 HOH HOH . 
D 4 HOH A 35 212 212 HOH HOH . 
D 4 HOH A 36 213 213 HOH HOH . 
D 4 HOH A 37 214 214 HOH HOH . 
D 4 HOH A 38 215 215 HOH HOH . 
D 4 HOH A 39 216 216 HOH HOH . 
D 4 HOH A 40 217 217 HOH HOH . 
D 4 HOH A 41 218 218 HOH HOH . 
D 4 HOH A 42 219 219 HOH HOH . 
D 4 HOH A 43 220 220 HOH HOH . 
D 4 HOH A 44 221 221 HOH HOH . 
D 4 HOH A 45 222 222 HOH HOH . 
D 4 HOH A 46 223 223 HOH HOH . 
D 4 HOH A 47 224 224 HOH HOH . 
D 4 HOH A 48 225 225 HOH HOH . 
D 4 HOH A 49 226 226 HOH HOH . 
D 4 HOH A 50 227 227 HOH HOH . 
D 4 HOH A 51 228 228 HOH HOH . 
D 4 HOH A 52 229 229 HOH HOH . 
D 4 HOH A 53 230 230 HOH HOH . 
D 4 HOH A 54 231 231 HOH HOH . 
D 4 HOH A 55 232 232 HOH HOH . 
D 4 HOH A 56 233 233 HOH HOH . 
D 4 HOH A 57 234 234 HOH HOH . 
D 4 HOH A 58 235 235 HOH HOH . 
D 4 HOH A 59 236 236 HOH HOH . 
D 4 HOH A 60 237 237 HOH HOH . 
D 4 HOH A 61 238 238 HOH HOH . 
D 4 HOH A 62 239 239 HOH HOH . 
D 4 HOH A 63 240 240 HOH HOH . 
D 4 HOH A 64 241 241 HOH HOH . 
D 4 HOH A 65 242 242 HOH HOH . 
D 4 HOH A 66 243 243 HOH HOH . 
D 4 HOH A 67 244 244 HOH HOH . 
D 4 HOH A 68 245 245 HOH HOH . 
D 4 HOH A 69 246 246 HOH HOH . 
D 4 HOH A 70 247 247 HOH HOH . 
D 4 HOH A 71 248 248 HOH HOH . 
D 4 HOH A 72 249 249 HOH HOH . 
D 4 HOH A 73 250 250 HOH HOH . 
D 4 HOH A 74 251 251 HOH HOH . 
D 4 HOH A 75 252 252 HOH HOH . 
D 4 HOH A 76 253 253 HOH HOH . 
D 4 HOH A 77 254 254 HOH HOH . 
D 4 HOH A 78 255 255 HOH HOH . 
D 4 HOH A 79 256 256 HOH HOH . 
D 4 HOH A 80 257 257 HOH HOH . 
D 4 HOH A 81 258 258 HOH HOH . 
D 4 HOH A 82 259 259 HOH HOH . 
D 4 HOH A 83 260 260 HOH HOH . 
D 4 HOH A 84 261 261 HOH HOH . 
D 4 HOH A 85 262 262 HOH HOH . 
D 4 HOH A 86 263 263 HOH HOH . 
D 4 HOH A 87 264 264 HOH HOH . 
D 4 HOH A 88 265 265 HOH HOH . 
D 4 HOH A 89 266 266 HOH HOH . 
D 4 HOH A 90 267 267 HOH HOH . 
D 4 HOH A 91 268 268 HOH HOH . 
D 4 HOH A 92 269 269 HOH HOH . 
D 4 HOH A 93 270 270 HOH HOH . 
D 4 HOH A 94 271 271 HOH HOH . 
D 4 HOH A 95 272 272 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 RTL . . . C 3 0.633 4.862 -7.803 1 22.59 ? C1 RTL 176 A 1 
HETATM 2 C C2 RTL . . . C 3 0.828 6.32 -8.284 1 19.84 ? C2 RTL 176 A 1 
HETATM 3 C C3 RTL . . . C 3 0.07 7.46 -7.6 1 20.87 ? C3 RTL 176 A 1 
HETATM 4 C C4 RTL . . . C 3 -0.868 7.145 -6.411 1 23.64 ? C4 RTL 176 A 1 
HETATM 5 C C5 RTL . . . C 3 -1.056 5.697 -5.875 1 22.82 ? C5 RTL 176 A 1 
HETATM 6 C C6 RTL . . . C 3 -0.276 4.61 -6.576 1 22.86 ? C6 RTL 176 A 1 
HETATM 7 C C7 RTL . . . C 3 -0.393 3.154 -6.15 1 20.57 ? C7 RTL 176 A 1 
HETATM 8 C C8 RTL . . . C 3 -1.441 2.428 -5.637 1 19.01 ? C8 RTL 176 A 1 
HETATM 9 C C9 RTL . . . C 3 -1.373 1.056 -5.362 1 17.21 ? C9 RTL 176 A 1 
HETATM 10 C C10 RTL . . . C 3 -2.677 0.643 -4.872 1 16.65 ? C10 RTL 176 A 1 
HETATM 11 C C11 RTL . . . C 3 -3.048 -0.604 -4.526 1 15.72 ? C11 RTL 176 A 1 
HETATM 12 C C12 RTL . . . C 3 -4.32 -0.855 -4.103 1 16.51 ? C12 RTL 176 A 1 
HETATM 13 C C13 RTL . . . C 3 -4.793 -2.154 -3.664 1 17.3 ? C13 RTL 176 A 1 
HETATM 14 C C14 RTL . . . C 3 -5.965 -2.198 -2.815 1 19.4 ? C14 RTL 176 A 1 
HETATM 15 C C15 RTL . . . C 3 -6.592 -3.491 -2.31 1 20.11 ? C15 RTL 176 A 1 
HETATM 16 O O1 RTL . . . C 3 -7.73 -3.366 -1.486 1 20.78 ? O1 RTL 176 A 1 
HETATM 17 C C16 RTL . . . C 3 2.05 4.171 -7.687 1 21.9 ? C16 RTL 176 A 1 
HETATM 18 C C17 RTL . . . C 3 -0.017 4.209 -9.05 1 20.47 ? C17 RTL 176 A 1 
HETATM 19 C C18 RTL . . . C 3 -0.736 5.882 -4.378 1 22.67 ? C18 RTL 176 A 1 
HETATM 20 C C19 RTL . . . C 3 -0.12 0.528 -4.578 1 17 ? C19 RTL 176 A 1 
HETATM 21 C C20 RTL . . . C 3 -4.077 -3.484 -4.071 1 16.83 ? C20 RTL 176 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           268 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           21 
#