data_1IKJ # _model_server_result.job_id GeZwoDqZS07BGNcNDWw54Q _model_server_result.datetime_utc '2024-11-04 23:32:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1ikj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":190}' # _entry.id 1IKJ # _exptl.entry_id 1IKJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 69.085 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description IMIDAZOLE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 94.28 _cell.angle_gamma 90 _cell.entry_id 1IKJ _cell.length_a 70.18 _cell.length_b 42.48 _cell.length_c 52.96 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1IKJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 2 A CYS 2 1_555 A SG CYS 122 A CYS 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? disulf ? disulf2 A SG CYS 41 A CYS 41 1_555 A SG CYS 171 A CYS 171 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.042 ? disulf ? disulf3 A SG CYS 41 A CYS 41 1_555 A SG CYS 171 A CYS 171 1_555 ? B ? ? B ? ? ? ? ? ? ? 1.996 ? metalc ? metalc1 A NE2 HIS 59 A HIS 59 1_555 B FE HEM . A HEM 185 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.951 ? metalc ? metalc2 B FE HEM . A HEM 185 1_555 C N1 IMD . A IMD 190 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? # _chem_comp.formula 'C3 H5 N2 1' _chem_comp.formula_weight 69.085 _chem_comp.id IMD _chem_comp.mon_nstd_flag . _chem_comp.name IMIDAZOLE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 IMD sing 255 n y N1 C5 IMD sing 256 n y N1 HN1 IMD sing 257 n n C2 N3 IMD doub 258 n y C2 H2 IMD sing 259 n n N3 C4 IMD sing 260 n y N3 HN3 IMD sing 261 n n C4 C5 IMD doub 262 n y C4 H4 IMD sing 263 n n C5 H5 IMD sing 264 n n # _atom_sites.entry_id 1IKJ _atom_sites.fract_transf_matrix[1][1] 0.014249 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001066 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.02354 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018935 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 185 185 HEM HEM . C 3 IMD A 1 190 190 IMD IMD . D 4 HOH A 1 200 200 HOH HOH . D 4 HOH A 2 201 201 HOH HOH . D 4 HOH A 3 202 202 HOH HOH . D 4 HOH A 4 203 203 HOH HOH . D 4 HOH A 5 204 204 HOH HOH . D 4 HOH A 6 205 205 HOH HOH . D 4 HOH A 7 206 206 HOH HOH . D 4 HOH A 8 207 207 HOH HOH . D 4 HOH A 9 208 208 HOH HOH . D 4 HOH A 10 209 209 HOH HOH . D 4 HOH A 11 210 210 HOH HOH . D 4 HOH A 12 211 211 HOH HOH . D 4 HOH A 13 212 212 HOH HOH . D 4 HOH A 14 213 213 HOH HOH . D 4 HOH A 15 214 214 HOH HOH . D 4 HOH A 16 215 215 HOH HOH . D 4 HOH A 17 216 216 HOH HOH . D 4 HOH A 18 217 217 HOH HOH . D 4 HOH A 19 218 218 HOH HOH . D 4 HOH A 20 219 219 HOH HOH . D 4 HOH A 21 220 220 HOH HOH . D 4 HOH A 22 222 222 HOH HOH . D 4 HOH A 23 223 223 HOH HOH . D 4 HOH A 24 224 224 HOH HOH . D 4 HOH A 25 225 225 HOH HOH . D 4 HOH A 26 226 226 HOH HOH . D 4 HOH A 27 227 227 HOH HOH . D 4 HOH A 28 228 228 HOH HOH . D 4 HOH A 29 229 229 HOH HOH . D 4 HOH A 30 230 230 HOH HOH . D 4 HOH A 31 231 231 HOH HOH . D 4 HOH A 32 232 232 HOH HOH . D 4 HOH A 33 233 233 HOH HOH . D 4 HOH A 34 234 234 HOH HOH . D 4 HOH A 35 235 235 HOH HOH . D 4 HOH A 36 236 236 HOH HOH . D 4 HOH A 37 237 237 HOH HOH . D 4 HOH A 38 238 238 HOH HOH . D 4 HOH A 39 239 239 HOH HOH . D 4 HOH A 40 240 240 HOH HOH . D 4 HOH A 41 241 241 HOH HOH . D 4 HOH A 42 242 242 HOH HOH . D 4 HOH A 43 243 243 HOH HOH . D 4 HOH A 44 244 244 HOH HOH . D 4 HOH A 45 245 245 HOH HOH . D 4 HOH A 46 246 246 HOH HOH . D 4 HOH A 47 247 247 HOH HOH . D 4 HOH A 48 248 248 HOH HOH . D 4 HOH A 49 249 249 HOH HOH . D 4 HOH A 50 250 250 HOH HOH . D 4 HOH A 51 251 251 HOH HOH . D 4 HOH A 52 252 252 HOH HOH . D 4 HOH A 53 253 253 HOH HOH . D 4 HOH A 54 254 254 HOH HOH . D 4 HOH A 55 255 255 HOH HOH . D 4 HOH A 56 256 256 HOH HOH . D 4 HOH A 57 257 257 HOH HOH . D 4 HOH A 58 258 258 HOH HOH . D 4 HOH A 59 259 259 HOH HOH . D 4 HOH A 60 260 260 HOH HOH . D 4 HOH A 61 261 261 HOH HOH . D 4 HOH A 62 262 262 HOH HOH . D 4 HOH A 63 263 263 HOH HOH . D 4 HOH A 64 264 264 HOH HOH . D 4 HOH A 65 265 265 HOH HOH . D 4 HOH A 66 266 266 HOH HOH . D 4 HOH A 67 267 267 HOH HOH . D 4 HOH A 68 268 268 HOH HOH . D 4 HOH A 69 269 269 HOH HOH . D 4 HOH A 70 270 270 HOH HOH . D 4 HOH A 71 271 271 HOH HOH . D 4 HOH A 72 272 272 HOH HOH . D 4 HOH A 73 273 273 HOH HOH . D 4 HOH A 74 274 274 HOH HOH . D 4 HOH A 75 275 275 HOH HOH . D 4 HOH A 76 276 276 HOH HOH . D 4 HOH A 77 277 277 HOH HOH . D 4 HOH A 78 278 278 HOH HOH . D 4 HOH A 79 279 279 HOH HOH . D 4 HOH A 80 281 281 HOH HOH . D 4 HOH A 81 282 282 HOH HOH . D 4 HOH A 82 284 284 HOH HOH . D 4 HOH A 83 285 285 HOH HOH . D 4 HOH A 84 286 286 HOH HOH . D 4 HOH A 85 287 287 HOH HOH . D 4 HOH A 86 288 288 HOH HOH . D 4 HOH A 87 289 289 HOH HOH . D 4 HOH A 88 290 290 HOH HOH . D 4 HOH A 89 291 291 HOH HOH . D 4 HOH A 90 292 292 HOH HOH . D 4 HOH A 91 293 293 HOH HOH . D 4 HOH A 92 294 294 HOH HOH . D 4 HOH A 93 295 295 HOH HOH . D 4 HOH A 94 296 296 HOH HOH . D 4 HOH A 95 297 297 HOH HOH . D 4 HOH A 96 298 298 HOH HOH . D 4 HOH A 97 299 299 HOH HOH . D 4 HOH A 98 300 300 HOH HOH . D 4 HOH A 99 301 301 HOH HOH . D 4 HOH A 100 302 302 HOH HOH . D 4 HOH A 101 303 303 HOH HOH . D 4 HOH A 102 304 304 HOH HOH . D 4 HOH A 103 305 305 HOH HOH . D 4 HOH A 104 306 306 HOH HOH . D 4 HOH A 105 307 307 HOH HOH . D 4 HOH A 106 308 308 HOH HOH . D 4 HOH A 107 309 309 HOH HOH . D 4 HOH A 108 310 310 HOH HOH . D 4 HOH A 109 311 311 HOH HOH . D 4 HOH A 110 312 312 HOH HOH . D 4 HOH A 111 313 313 HOH HOH . D 4 HOH A 112 314 314 HOH HOH . D 4 HOH A 113 315 315 HOH HOH . D 4 HOH A 114 316 316 HOH HOH . D 4 HOH A 115 317 317 HOH HOH . D 4 HOH A 116 318 318 HOH HOH . D 4 HOH A 117 319 319 HOH HOH . D 4 HOH A 118 320 320 HOH HOH . D 4 HOH A 119 321 321 HOH HOH . D 4 HOH A 120 322 322 HOH HOH . D 4 HOH A 121 323 323 HOH HOH . D 4 HOH A 122 324 324 HOH HOH . D 4 HOH A 123 325 325 HOH HOH . D 4 HOH A 124 326 326 HOH HOH . D 4 HOH A 125 327 327 HOH HOH . D 4 HOH A 126 328 328 HOH HOH . D 4 HOH A 127 329 329 HOH HOH . D 4 HOH A 128 330 330 HOH HOH . D 4 HOH A 129 331 331 HOH HOH . D 4 HOH A 130 333 333 HOH HOH . D 4 HOH A 131 334 334 HOH HOH . D 4 HOH A 132 335 335 HOH HOH . D 4 HOH A 133 336 336 HOH HOH . D 4 HOH A 134 337 337 HOH HOH . D 4 HOH A 135 338 338 HOH HOH . D 4 HOH A 136 339 339 HOH HOH . D 4 HOH A 137 340 340 HOH HOH . D 4 HOH A 138 341 341 HOH HOH . D 4 HOH A 139 342 342 HOH HOH . D 4 HOH A 140 343 343 HOH HOH . D 4 HOH A 141 345 345 HOH HOH . D 4 HOH A 142 347 347 HOH HOH . D 4 HOH A 143 348 348 HOH HOH . D 4 HOH A 144 349 349 HOH HOH . D 4 HOH A 145 350 350 HOH HOH . D 4 HOH A 146 351 351 HOH HOH . D 4 HOH A 147 352 352 HOH HOH . D 4 HOH A 148 353 353 HOH HOH . D 4 HOH A 149 354 354 HOH HOH . D 4 HOH A 150 355 355 HOH HOH . D 4 HOH A 151 356 356 HOH HOH . D 4 HOH A 152 357 357 HOH HOH . D 4 HOH A 153 358 358 HOH HOH . D 4 HOH A 154 359 359 HOH HOH . D 4 HOH A 155 360 360 HOH HOH . D 4 HOH A 156 361 361 HOH HOH . D 4 HOH A 157 362 362 HOH HOH . D 4 HOH A 158 363 363 HOH HOH . D 4 HOH A 159 364 364 HOH HOH . D 4 HOH A 160 365 365 HOH HOH . D 4 HOH A 161 366 366 HOH HOH . D 4 HOH A 162 367 367 HOH HOH . D 4 HOH A 163 368 368 HOH HOH . D 4 HOH A 164 369 369 HOH HOH . D 4 HOH A 165 370 370 HOH HOH . D 4 HOH A 166 371 371 HOH HOH . D 4 HOH A 167 372 372 HOH HOH . D 4 HOH A 168 373 373 HOH HOH . D 4 HOH A 169 374 374 HOH HOH . D 4 HOH A 170 375 375 HOH HOH . D 4 HOH A 171 376 376 HOH HOH . D 4 HOH A 172 377 377 HOH HOH . D 4 HOH A 173 378 378 HOH HOH . D 4 HOH A 174 379 379 HOH HOH . D 4 HOH A 175 380 380 HOH HOH . D 4 HOH A 176 381 381 HOH HOH . D 4 HOH A 177 382 382 HOH HOH . D 4 HOH A 178 383 383 HOH HOH . D 4 HOH A 179 384 384 HOH HOH . D 4 HOH A 180 385 385 HOH HOH . D 4 HOH A 181 386 386 HOH HOH . D 4 HOH A 182 387 387 HOH HOH . D 4 HOH A 183 388 388 HOH HOH . D 4 HOH A 184 389 389 HOH HOH . D 4 HOH A 185 390 390 HOH HOH . D 4 HOH A 186 391 391 HOH HOH . D 4 HOH A 187 392 392 HOH HOH . D 4 HOH A 188 393 393 HOH HOH . D 4 HOH A 189 394 394 HOH HOH . D 4 HOH A 190 395 395 HOH HOH . D 4 HOH A 191 396 396 HOH HOH . D 4 HOH A 192 397 397 HOH HOH . D 4 HOH A 193 398 398 HOH HOH . D 4 HOH A 194 399 399 HOH HOH . D 4 HOH A 195 401 401 HOH HOH . D 4 HOH A 196 402 402 HOH HOH . D 4 HOH A 197 403 403 HOH HOH . D 4 HOH A 198 404 404 HOH HOH . D 4 HOH A 199 405 405 HOH HOH . D 4 HOH A 200 406 406 HOH HOH . D 4 HOH A 201 407 407 HOH HOH . D 4 HOH A 202 408 408 HOH HOH . D 4 HOH A 203 409 409 HOH HOH . D 4 HOH A 204 410 410 HOH HOH . D 4 HOH A 205 411 411 HOH HOH . D 4 HOH A 206 412 412 HOH HOH . D 4 HOH A 207 413 413 HOH HOH . D 4 HOH A 208 414 414 HOH HOH . D 4 HOH A 209 416 416 HOH HOH . D 4 HOH A 210 417 417 HOH HOH . D 4 HOH A 211 418 418 HOH HOH . D 4 HOH A 212 419 419 HOH HOH . D 4 HOH A 213 420 420 HOH HOH . D 4 HOH A 214 422 422 HOH HOH . D 4 HOH A 215 423 423 HOH HOH . D 4 HOH A 216 424 424 HOH HOH . D 4 HOH A 217 425 425 HOH HOH . D 4 HOH A 218 426 426 HOH HOH . D 4 HOH A 219 427 427 HOH HOH . D 4 HOH A 220 428 428 HOH HOH . D 4 HOH A 221 429 429 HOH HOH . D 4 HOH A 222 430 430 HOH HOH . D 4 HOH A 223 431 431 HOH HOH . D 4 HOH A 224 432 432 HOH HOH . D 4 HOH A 225 433 433 HOH HOH . D 4 HOH A 226 434 434 HOH HOH . D 4 HOH A 227 435 435 HOH HOH . D 4 HOH A 228 436 436 HOH HOH . D 4 HOH A 229 437 437 HOH HOH . D 4 HOH A 230 439 439 HOH HOH . D 4 HOH A 231 440 440 HOH HOH . D 4 HOH A 232 441 441 HOH HOH . D 4 HOH A 233 442 442 HOH HOH . D 4 HOH A 234 443 443 HOH HOH . D 4 HOH A 235 444 444 HOH HOH . D 4 HOH A 236 445 445 HOH HOH . D 4 HOH A 237 447 447 HOH HOH . D 4 HOH A 238 450 450 HOH HOH . D 4 HOH A 239 451 451 HOH HOH . D 4 HOH A 240 452 452 HOH HOH . D 4 HOH A 241 453 453 HOH HOH . D 4 HOH A 242 454 454 HOH HOH . D 4 HOH A 243 455 455 HOH HOH . D 4 HOH A 244 456 456 HOH HOH . D 4 HOH A 245 457 457 HOH HOH . D 4 HOH A 246 458 458 HOH HOH . D 4 HOH A 247 459 459 HOH HOH . D 4 HOH A 248 460 460 HOH HOH . D 4 HOH A 249 461 461 HOH HOH . D 4 HOH A 250 462 462 HOH HOH . D 4 HOH A 251 463 463 HOH HOH . D 4 HOH A 252 464 464 HOH HOH . D 4 HOH A 253 465 465 HOH HOH . D 4 HOH A 254 467 467 HOH HOH . D 4 HOH A 255 468 468 HOH HOH . D 4 HOH A 256 469 469 HOH HOH . D 4 HOH A 257 470 470 HOH HOH . D 4 HOH A 258 471 471 HOH HOH . D 4 HOH A 259 472 472 HOH HOH . D 4 HOH A 260 473 473 HOH HOH . D 4 HOH A 261 474 474 HOH HOH . D 4 HOH A 262 475 475 HOH HOH . D 4 HOH A 263 476 476 HOH HOH . D 4 HOH A 264 477 477 HOH HOH . D 4 HOH A 265 478 478 HOH HOH . D 4 HOH A 266 479 479 HOH HOH . D 4 HOH A 267 480 480 HOH HOH . D 4 HOH A 268 481 481 HOH HOH . D 4 HOH A 269 482 482 HOH HOH . D 4 HOH A 270 483 483 HOH HOH . D 4 HOH A 271 484 484 HOH HOH . D 4 HOH A 272 485 485 HOH HOH . D 4 HOH A 273 486 486 HOH HOH . D 4 HOH A 274 487 487 HOH HOH . D 4 HOH A 275 488 488 HOH HOH . D 4 HOH A 276 489 489 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 IMD . . . C 3 10.987 19.177 34.792 1 7.49 ? N1 IMD 190 A 1 HETATM 2 C C2 IMD . . . C 3 10.018 18.486 34.18 1 8.47 ? C2 IMD 190 A 1 HETATM 3 N N3 IMD . . . C 3 10.453 17.905 33.078 1 7.77 ? N3 IMD 190 A 1 HETATM 4 C C4 IMD . . . C 3 11.793 18.125 32.981 1 8.62 ? C4 IMD 190 A 1 HETATM 5 C C5 IMD . . . C 3 12.119 18.933 34.02 1 10 ? C5 IMD 190 A 1 # _model_server_stats.io_time_ms 66 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 5 #