data_1IKK # _model_server_result.job_id fJjA8u4NS8EkPr2oG_TWiQ _model_server_result.datetime_utc '2024-10-18 15:32:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1ikk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":23}' # _entry.id 1IKK # _exptl.entry_id 1IKK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1IKK _cell.length_a 35.558 _cell.length_b 38.737 _cell.length_c 32.508 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1IKK _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 C MG MG . A MG 22 1_555 G O HOH . A HOH 140 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.988 ? metalc ? metalc2 C MG MG . A MG 22 1_555 G O HOH . A HOH 141 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.223 ? metalc ? metalc3 C MG MG . A MG 22 1_555 G O HOH . A HOH 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.225 ? metalc ? metalc4 C MG MG . A MG 22 1_555 G O HOH . A HOH 144 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? metalc ? metalc5 C MG MG . A MG 22 1_555 H O HOH . B HOH 143 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.989 ? metalc ? metalc6 C MG MG . A MG 22 1_555 H O HOH . B HOH 145 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? metalc ? metalc7 D MG MG . A MG 23 1_555 G O HOH . A HOH 148 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.224 ? metalc ? metalc8 D MG MG . A MG 23 1_555 H O HOH . B HOH 146 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.992 ? metalc ? metalc9 D MG MG . A MG 23 1_555 H O HOH . B HOH 147 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.225 ? metalc ? metalc10 D MG MG . A MG 23 1_555 H O HOH . B HOH 149 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.989 ? metalc ? metalc11 D MG MG . A MG 23 1_555 H O HOH . B HOH 150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? metalc ? metalc12 D MG MG . A MG 23 1_555 H O HOH . B HOH 151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? metalc ? metalc13 G O HOH . A HOH 135 1_555 E MG MG . B MG 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.224 ? metalc ? metalc14 G O HOH . A HOH 137 1_555 E MG MG . B MG 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.991 ? metalc ? metalc15 G O HOH . A HOH 138 1_555 E MG MG . B MG 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? metalc ? metalc16 G O HOH . A HOH 139 1_555 E MG MG . B MG 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? metalc ? metalc17 E MG MG . B MG 21 1_555 H O HOH . B HOH 134 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.991 ? metalc ? metalc18 E MG MG . B MG 21 1_555 H O HOH . B HOH 136 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.227 ? metalc ? metalc19 F MG MG . B MG 24 1_555 H O HOH . B HOH 152 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.991 ? metalc ? metalc20 F MG MG . B MG 24 1_555 H O HOH . B HOH 153 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.226 ? metalc ? metalc21 F MG MG . B MG 24 1_555 H O HOH . B HOH 154 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.226 ? metalc ? metalc22 F MG MG . B MG 24 1_555 H O HOH . B HOH 155 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.993 ? metalc ? metalc23 F MG MG . B MG 24 1_555 H O HOH . B HOH 156 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? metalc ? metalc24 F MG MG . B MG 24 1_555 H O HOH . B HOH 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? hydrog WATSON-CRICK hydrog1 A N3 DC 1 A DC 1 1_555 B N1 DG 10 B DG 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 A N4 DC 1 A DC 1 1_555 B O6 DG 10 B DG 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 A O2 DC 1 A DC 1 1_555 B N2 DG 10 B DG 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 A N3 DC 2 A DC 2 1_555 B N1 DG 9 B DG 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 A N4 DC 2 A DC 2 1_555 B O6 DG 9 B DG 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 A O2 DC 2 A DC 2 1_555 B N2 DG 9 B DG 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 A N3 DT 3 A DT 3 1_555 B N1 DA 8 B DA 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 A O4 DT 3 A DT 3 1_555 B N6 DA 8 B DA 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 A N3 DT 4 A DT 4 1_555 B N1 DA 7 B DA 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 A O4 DT 4 A DT 4 1_555 B N6 DA 7 B DA 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 A N3 DT 5 A DT 5 1_555 B N1 DA 6 B DA 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 A O4 DT 5 A DT 5 1_555 B N6 DA 6 B DA 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 A N1 DA 6 A DA 6 1_555 B N3 DT 5 B DT 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 A N6 DA 6 A DA 6 1_555 B O4 DT 5 B DT 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog15 A N1 DA 7 A DA 7 1_555 B N3 DT 4 B DT 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog16 A N6 DA 7 A DA 7 1_555 B O4 DT 4 B DT 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog17 A N1 DA 8 A DA 8 1_555 B N3 DT 3 B DT 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog18 A N6 DA 8 A DA 8 1_555 B O4 DT 3 B DT 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog19 A N1 DG 9 A DG 9 1_555 B N3 DC 2 B DC 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog20 A N2 DG 9 A DG 9 1_555 B O2 DC 2 B DC 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog21 A O6 DG 9 A DG 9 1_555 B N4 DC 2 B DC 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog22 A N1 DG 10 A DG 10 1_555 B N3 DC 1 B DC 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog23 A N2 DG 10 A DG 10 1_555 B O2 DC 1 B DC 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog24 A O6 DG 10 A DG 10 1_555 B N4 DC 1 B DC 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1IKK _atom_sites.fract_transf_matrix[1][1] 0.028123 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.025815 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.030762 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG A 1 22 22 MG MO6 . D 2 MG A 1 23 23 MG MO6 . E 2 MG B 1 21 21 MG MO6 . F 2 MG B 1 24 24 MG MO6 . G 3 HOH A 1 27 27 HOH HOH . G 3 HOH A 2 28 28 HOH HOH . G 3 HOH A 3 29 29 HOH HOH . G 3 HOH A 4 30 30 HOH HOH . G 3 HOH A 5 32 32 HOH HOH . G 3 HOH A 6 34 34 HOH HOH . G 3 HOH A 7 36 36 HOH HOH . G 3 HOH A 8 38 38 HOH HOH . G 3 HOH A 9 39 39 HOH HOH . G 3 HOH A 10 40 40 HOH HOH . G 3 HOH A 11 41 41 HOH HOH . G 3 HOH A 12 42 42 HOH HOH . G 3 HOH A 13 43 43 HOH HOH . G 3 HOH A 14 44 44 HOH HOH . G 3 HOH A 15 47 47 HOH HOH . G 3 HOH A 16 48 48 HOH HOH . G 3 HOH A 17 49 49 HOH HOH . G 3 HOH A 18 50 50 HOH HOH . G 3 HOH A 19 51 51 HOH HOH . G 3 HOH A 20 52 52 HOH HOH . G 3 HOH A 21 53 53 HOH HOH . G 3 HOH A 22 54 54 HOH HOH . G 3 HOH A 23 55 55 HOH HOH . G 3 HOH A 24 56 56 HOH HOH . G 3 HOH A 25 62 62 HOH HOH . G 3 HOH A 26 63 63 HOH HOH . G 3 HOH A 27 64 64 HOH HOH . G 3 HOH A 28 65 65 HOH HOH . G 3 HOH A 29 70 70 HOH HOH . G 3 HOH A 30 72 72 HOH HOH . G 3 HOH A 31 73 73 HOH HOH . G 3 HOH A 32 74 74 HOH HOH . G 3 HOH A 33 75 75 HOH HOH . G 3 HOH A 34 76 76 HOH HOH . G 3 HOH A 35 77 77 HOH HOH . G 3 HOH A 36 78 78 HOH HOH . G 3 HOH A 37 81 81 HOH HOH . G 3 HOH A 38 82 82 HOH HOH . G 3 HOH A 39 83 83 HOH HOH . G 3 HOH A 40 84 84 HOH HOH . G 3 HOH A 41 86 86 HOH HOH . G 3 HOH A 42 94 94 HOH HOH . G 3 HOH A 43 95 95 HOH HOH . G 3 HOH A 44 99 99 HOH HOH . G 3 HOH A 45 101 101 HOH HOH . G 3 HOH A 46 105 105 HOH HOH . G 3 HOH A 47 109 109 HOH HOH . G 3 HOH A 48 111 111 HOH HOH . G 3 HOH A 49 113 113 HOH HOH . G 3 HOH A 50 118 118 HOH HOH . G 3 HOH A 51 119 119 HOH HOH . G 3 HOH A 52 120 120 HOH HOH . G 3 HOH A 53 122 122 HOH HOH . G 3 HOH A 54 125 125 HOH HOH . G 3 HOH A 55 127 127 HOH HOH . G 3 HOH A 56 129 129 HOH HOH . G 3 HOH A 57 133 133 HOH HOH . G 3 HOH A 58 135 21 HOH MO6 . G 3 HOH A 59 137 21 HOH MO6 . G 3 HOH A 60 138 21 HOH MO6 . G 3 HOH A 61 139 21 HOH MO6 . G 3 HOH A 62 140 22 HOH MO6 . G 3 HOH A 63 141 22 HOH MO6 . G 3 HOH A 64 142 22 HOH MO6 . G 3 HOH A 65 144 22 HOH MO6 . G 3 HOH A 66 148 23 HOH MO6 . H 3 HOH B 1 25 25 HOH HOH . H 3 HOH B 2 26 26 HOH HOH . H 3 HOH B 3 31 31 HOH HOH . H 3 HOH B 4 33 33 HOH HOH . H 3 HOH B 5 35 35 HOH HOH . H 3 HOH B 6 37 37 HOH HOH . H 3 HOH B 7 45 45 HOH HOH . H 3 HOH B 8 46 46 HOH HOH . H 3 HOH B 9 57 57 HOH HOH . H 3 HOH B 10 58 58 HOH HOH . H 3 HOH B 11 59 59 HOH HOH . H 3 HOH B 12 60 60 HOH HOH . H 3 HOH B 13 61 61 HOH HOH . H 3 HOH B 14 66 66 HOH HOH . H 3 HOH B 15 67 67 HOH HOH . H 3 HOH B 16 68 68 HOH HOH . H 3 HOH B 17 69 69 HOH HOH . H 3 HOH B 18 71 71 HOH HOH . H 3 HOH B 19 79 79 HOH HOH . H 3 HOH B 20 80 80 HOH HOH . H 3 HOH B 21 85 85 HOH HOH . H 3 HOH B 22 87 87 HOH HOH . H 3 HOH B 23 88 88 HOH HOH . H 3 HOH B 24 89 89 HOH HOH . H 3 HOH B 25 90 90 HOH HOH . H 3 HOH B 26 91 91 HOH HOH . H 3 HOH B 27 92 92 HOH HOH . H 3 HOH B 28 93 93 HOH HOH . H 3 HOH B 29 96 96 HOH HOH . H 3 HOH B 30 97 97 HOH HOH . H 3 HOH B 31 98 98 HOH HOH . H 3 HOH B 32 100 100 HOH HOH . H 3 HOH B 33 102 102 HOH HOH . H 3 HOH B 34 103 103 HOH HOH . H 3 HOH B 35 104 104 HOH HOH . H 3 HOH B 36 106 106 HOH HOH . H 3 HOH B 37 107 107 HOH HOH . H 3 HOH B 38 108 108 HOH HOH . H 3 HOH B 39 110 110 HOH HOH . H 3 HOH B 40 112 112 HOH HOH . H 3 HOH B 41 114 114 HOH HOH . H 3 HOH B 42 115 115 HOH HOH . H 3 HOH B 43 116 116 HOH HOH . H 3 HOH B 44 117 117 HOH HOH . H 3 HOH B 45 121 121 HOH HOH . H 3 HOH B 46 123 123 HOH HOH . H 3 HOH B 47 124 124 HOH HOH . H 3 HOH B 48 126 126 HOH HOH . H 3 HOH B 49 128 128 HOH HOH . H 3 HOH B 50 130 130 HOH HOH . H 3 HOH B 51 131 131 HOH HOH . H 3 HOH B 52 132 132 HOH HOH . H 3 HOH B 53 134 21 HOH MO6 . H 3 HOH B 54 136 21 HOH MO6 . H 3 HOH B 55 143 22 HOH MO6 . H 3 HOH B 56 145 22 HOH MO6 . H 3 HOH B 57 146 23 HOH MO6 . H 3 HOH B 58 147 23 HOH MO6 . H 3 HOH B 59 149 23 HOH MO6 . H 3 HOH B 60 150 23 HOH MO6 . H 3 HOH B 61 151 23 HOH MO6 . H 3 HOH B 62 152 24 HOH MO6 . H 3 HOH B 63 153 24 HOH MO6 . H 3 HOH B 64 154 24 HOH MO6 . H 3 HOH B 65 155 24 HOH MO6 . H 3 HOH B 66 156 24 HOH MO6 . H 3 HOH B 67 157 24 HOH MO6 . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x 20.951 _atom_site.Cartn_y 8.196 _atom_site.Cartn_z 27.014 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 10.68 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 23 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 229 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #