data_1IL3 # _model_server_result.job_id MyrOKFmSTBiEPfLM_J6zOQ _model_server_result.datetime_utc '2024-11-24 00:45:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1il3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 1IL3 # _exptl.entry_id 1IL3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details 'CHEMICAL SYNTHESIS' _entity.formula_weight 150.138 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 7-DEAZAGUANINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 112.9 _cell.angle_gamma 90 _cell.entry_id 1IL3 _cell.length_a 42.77 _cell.length_b 68.27 _cell.length_c 49.93 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1IL3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H6 N4 O' _chem_comp.formula_weight 150.138 _chem_comp.id 7DG _chem_comp.mon_nstd_flag . _chem_comp.name 7-DEAZAGUANINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N9 C8 7DG doub 1 n n N9 C4 7DG sing 2 n n C8 C7 7DG sing 3 n n C8 H8 7DG sing 4 n n C7 C5 7DG sing 5 n n C7 H71 7DG sing 6 n n C7 H72 7DG sing 7 n n C5 C6 7DG sing 8 n n C5 C4 7DG doub 9 n n C6 O6 7DG doub 10 n n C6 N1 7DG sing 11 n n N1 C2 7DG sing 12 n n N1 HN1 7DG sing 13 n n C2 N2 7DG sing 14 n n C2 N3 7DG doub 15 n n N2 HN21 7DG sing 16 n n N2 HN22 7DG sing 17 n n N3 C4 7DG sing 18 n n # _atom_sites.entry_id 1IL3 _atom_sites.fract_transf_matrix[1][1] 0.023381 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.009876 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014648 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021742 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 7DG A 1 301 301 7DG 7DG . C 3 HOH A 1 302 1 HOH HOH . C 3 HOH A 2 303 2 HOH HOH . C 3 HOH A 3 304 3 HOH HOH . C 3 HOH A 4 305 4 HOH HOH . C 3 HOH A 5 306 5 HOH HOH . C 3 HOH A 6 307 6 HOH HOH . C 3 HOH A 7 308 7 HOH HOH . C 3 HOH A 8 309 8 HOH HOH . C 3 HOH A 9 310 9 HOH HOH . C 3 HOH A 10 311 10 HOH HOH . C 3 HOH A 11 312 11 HOH HOH . C 3 HOH A 12 313 12 HOH HOH . C 3 HOH A 13 314 13 HOH HOH . C 3 HOH A 14 315 14 HOH HOH . C 3 HOH A 15 316 15 HOH HOH . C 3 HOH A 16 317 16 HOH HOH . C 3 HOH A 17 318 17 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N9 7DG . . . B 2 -1.079 0.558 7.842 0.98 19.89 ? N9 7DG 301 A 1 HETATM 2 C C8 7DG . . . B 2 -1.69 0.959 6.711 0.98 16.99 ? C8 7DG 301 A 1 HETATM 3 C C7 7DG . . . B 2 -0.753 1.491 5.821 0.98 18.31 ? C7 7DG 301 A 1 HETATM 4 C C5 7DG . . . B 2 0.478 1.389 6.469 0.98 20.05 ? C5 7DG 301 A 1 HETATM 5 C C6 7DG . . . B 2 1.792 1.736 6.128 0.98 19.76 ? C6 7DG 301 A 1 HETATM 6 O O6 7DG . . . B 2 2.099 2.252 5.077 0.98 15.11 ? O6 7DG 301 A 1 HETATM 7 N N1 7DG . . . B 2 2.765 1.472 7.039 0.98 16.9 ? N1 7DG 301 A 1 HETATM 8 C C2 7DG . . . B 2 2.499 0.897 8.245 0.98 19.38 ? C2 7DG 301 A 1 HETATM 9 N N2 7DG . . . B 2 3.465 0.636 9.143 0.98 16.86 ? N2 7DG 301 A 1 HETATM 10 N N3 7DG . . . B 2 1.236 0.564 8.595 0.98 20.97 ? N3 7DG 301 A 1 HETATM 11 C C4 7DG . . . B 2 0.236 0.806 7.715 0.98 19.15 ? C4 7DG 301 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 265 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 11 #