data_1INN # _model_server_result.job_id OJwHTh9VUgEr9OGvdzg6Ug _model_server_result.datetime_utc '2024-10-14 06:14:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1inn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":501}' # _entry.id 1INN # _exptl.entry_id 1INN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 149.211 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description METHIONINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.79 _cell.angle_gamma 90 _cell.entry_id 1INN _cell.length_a 43.78 _cell.length_b 82.26 _cell.length_c 49.52 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1INN _symmetry.cell_setting monoclinic _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C TYR 66 A TYR 66 1_555 A N MSE 67 A MSE 67 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale2 A C MSE 67 A MSE 67 1_555 A N ARG 68 A ARG 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale3 A C PRO 79 A PRO 79 1_555 A N MSE 80 A MSE 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale4 A C MSE 80 A MSE 80 1_555 A N GLY 81 A GLY 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale5 A C GLY 85 A GLY 85 1_555 A N MSE 86 A MSE 86 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale6 A C MSE 86 A MSE 86 1_555 A N TYR 87 A TYR 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale7 A C TYR 87 A TYR 87 1_555 A N MSE 88 A MSE 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale8 A C MSE 88 A MSE 88 1_555 A N ALA 89 A ALA 89 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale9 A C VAL 99 A VAL 99 1_555 A N MSE 100 A MSE 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale10 A C MSE 100 A MSE 100 1_555 A N LYS 101 A LYS 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? metalc ? metalc1 C ZN ZN . A ZN 167 1_555 A NE2 HIS 57 A HIS 57 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.147 ? metalc ? metalc2 C ZN ZN . A ZN 167 1_555 A SG CYS 125 A CYS 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.391 ? metalc ? metalc3 C ZN ZN . A ZN 167 1_555 A NE2 HIS 61 A HIS 61 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.194 ? covale ? covale11 B C TYR 66 B TYR 66 1_555 B N MSE 67 B MSE 67 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale12 B C MSE 67 B MSE 67 1_555 B N ARG 68 B ARG 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale13 B C PRO 79 B PRO 79 1_555 B N MSE 80 B MSE 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale14 B C MSE 80 B MSE 80 1_555 B N GLY 81 B GLY 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale15 B C GLY 85 B GLY 85 1_555 B N MSE 86 B MSE 86 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale16 B C MSE 86 B MSE 86 1_555 B N TYR 87 B TYR 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale17 B C TYR 87 B TYR 87 1_555 B N MSE 88 B MSE 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale18 B C MSE 88 B MSE 88 1_555 B N ALA 89 B ALA 89 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale19 B C VAL 99 B VAL 99 1_555 B N MSE 100 B MSE 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale20 B C MSE 100 B MSE 100 1_555 B N LYS 101 B LYS 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? metalc ? metalc4 D ZN ZN . B ZN 167 1_555 B NE2 HIS 61 B HIS 61 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.088 ? metalc ? metalc5 D ZN ZN . B ZN 167 1_555 B SG CYS 125 B CYS 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.338 ? metalc ? metalc6 D ZN ZN . B ZN 167 1_555 G O HOH . B HOH 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.099 ? metalc ? metalc7 D ZN ZN . B ZN 167 1_555 B NE2 HIS 57 B HIS 57 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.153 ? # _chem_comp.formula 'C5 H11 N O2 S' _chem_comp.formula_weight 149.211 _chem_comp.id MET _chem_comp.mon_nstd_flag y _chem_comp.name METHIONINE _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1INN _atom_sites.fract_transf_matrix[1][1] 0.022841 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005185 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012157 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020708 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 167 1 ZN ZN . D 2 ZN B 1 167 2 ZN ZN . E 3 MET B 1 501 501 MET MET . F 4 HOH A 1 168 4 HOH HOH . F 4 HOH A 2 169 6 HOH HOH . F 4 HOH A 3 170 8 HOH HOH . F 4 HOH A 4 171 14 HOH HOH . F 4 HOH A 5 172 16 HOH HOH . F 4 HOH A 6 173 17 HOH HOH . F 4 HOH A 7 174 19 HOH HOH . F 4 HOH A 8 175 20 HOH HOH . F 4 HOH A 9 176 22 HOH HOH . F 4 HOH A 10 177 23 HOH HOH . F 4 HOH A 11 178 25 HOH HOH . F 4 HOH A 12 179 26 HOH HOH . F 4 HOH A 13 180 27 HOH HOH . F 4 HOH A 14 181 31 HOH HOH . F 4 HOH A 15 182 32 HOH HOH . F 4 HOH A 16 183 34 HOH HOH . F 4 HOH A 17 184 36 HOH HOH . F 4 HOH A 18 185 37 HOH HOH . F 4 HOH A 19 186 41 HOH HOH . F 4 HOH A 20 187 42 HOH HOH . F 4 HOH A 21 188 43 HOH HOH . F 4 HOH A 22 189 44 HOH HOH . F 4 HOH A 23 190 48 HOH HOH . F 4 HOH A 24 191 51 HOH HOH . F 4 HOH A 25 192 52 HOH HOH . F 4 HOH A 26 193 54 HOH HOH . F 4 HOH A 27 194 60 HOH HOH . F 4 HOH A 28 195 64 HOH HOH . F 4 HOH A 29 196 65 HOH HOH . F 4 HOH A 30 197 66 HOH HOH . F 4 HOH A 31 198 67 HOH HOH . F 4 HOH A 32 199 68 HOH HOH . F 4 HOH A 33 200 70 HOH HOH . F 4 HOH A 34 201 71 HOH HOH . F 4 HOH A 35 202 72 HOH HOH . F 4 HOH A 36 203 73 HOH HOH . F 4 HOH A 37 204 75 HOH HOH . F 4 HOH A 38 205 76 HOH HOH . F 4 HOH A 39 206 77 HOH HOH . F 4 HOH A 40 207 78 HOH HOH . F 4 HOH A 41 208 80 HOH HOH . F 4 HOH A 42 209 82 HOH HOH . F 4 HOH A 43 210 89 HOH HOH . F 4 HOH A 44 211 91 HOH HOH . F 4 HOH A 45 212 95 HOH HOH . F 4 HOH A 46 213 97 HOH HOH . F 4 HOH A 47 214 100 HOH HOH . F 4 HOH A 48 215 103 HOH HOH . F 4 HOH A 49 216 104 HOH HOH . F 4 HOH A 50 217 105 HOH HOH . F 4 HOH A 51 218 106 HOH HOH . F 4 HOH A 52 219 109 HOH HOH . F 4 HOH A 53 220 110 HOH HOH . F 4 HOH A 54 221 113 HOH HOH . F 4 HOH A 55 222 117 HOH HOH . F 4 HOH A 56 223 118 HOH HOH . F 4 HOH A 57 224 119 HOH HOH . F 4 HOH A 58 225 120 HOH HOH . F 4 HOH A 59 226 122 HOH HOH . G 4 HOH B 1 502 3 HOH HOH . G 4 HOH B 2 503 5 HOH HOH . G 4 HOH B 3 504 7 HOH HOH . G 4 HOH B 4 505 9 HOH HOH . G 4 HOH B 5 506 10 HOH HOH . G 4 HOH B 6 507 11 HOH HOH . G 4 HOH B 7 508 12 HOH HOH . G 4 HOH B 8 509 13 HOH HOH . G 4 HOH B 9 510 15 HOH HOH . G 4 HOH B 10 511 18 HOH HOH . G 4 HOH B 11 512 21 HOH HOH . G 4 HOH B 12 513 24 HOH HOH . G 4 HOH B 13 514 28 HOH HOH . G 4 HOH B 14 515 29 HOH HOH . G 4 HOH B 15 516 30 HOH HOH . G 4 HOH B 16 517 33 HOH HOH . G 4 HOH B 17 518 35 HOH HOH . G 4 HOH B 18 519 38 HOH HOH . G 4 HOH B 19 520 39 HOH HOH . G 4 HOH B 20 521 40 HOH HOH . G 4 HOH B 21 522 45 HOH HOH . G 4 HOH B 22 523 46 HOH HOH . G 4 HOH B 23 524 47 HOH HOH . G 4 HOH B 24 525 49 HOH HOH . G 4 HOH B 25 526 50 HOH HOH . G 4 HOH B 26 527 53 HOH HOH . G 4 HOH B 27 528 55 HOH HOH . G 4 HOH B 28 529 56 HOH HOH . G 4 HOH B 29 530 57 HOH HOH . G 4 HOH B 30 531 58 HOH HOH . G 4 HOH B 31 532 59 HOH HOH . G 4 HOH B 32 533 61 HOH HOH . G 4 HOH B 33 534 62 HOH HOH . G 4 HOH B 34 535 63 HOH HOH . G 4 HOH B 35 536 69 HOH HOH . G 4 HOH B 36 537 74 HOH HOH . G 4 HOH B 37 538 79 HOH HOH . G 4 HOH B 38 539 81 HOH HOH . G 4 HOH B 39 540 83 HOH HOH . G 4 HOH B 40 541 84 HOH HOH . G 4 HOH B 41 542 85 HOH HOH . G 4 HOH B 42 543 86 HOH HOH . G 4 HOH B 43 544 87 HOH HOH . G 4 HOH B 44 545 88 HOH HOH . G 4 HOH B 45 546 90 HOH HOH . G 4 HOH B 46 547 92 HOH HOH . G 4 HOH B 47 548 93 HOH HOH . G 4 HOH B 48 549 94 HOH HOH . G 4 HOH B 49 550 96 HOH HOH . G 4 HOH B 50 551 98 HOH HOH . G 4 HOH B 51 552 99 HOH HOH . G 4 HOH B 52 553 101 HOH HOH . G 4 HOH B 53 554 102 HOH HOH . G 4 HOH B 54 555 107 HOH HOH . G 4 HOH B 55 556 108 HOH HOH . G 4 HOH B 56 557 111 HOH HOH . G 4 HOH B 57 558 112 HOH HOH . G 4 HOH B 58 559 114 HOH HOH . G 4 HOH B 59 560 115 HOH HOH . G 4 HOH B 60 561 116 HOH HOH . G 4 HOH B 61 562 121 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N MET . . . E 3 -14.292 -22.234 5.601 1 23.35 ? N MET 501 B 1 HETATM 2 C CA MET . . . E 3 -13.544 -23.512 5.417 1 23.05 ? CA MET 501 B 1 HETATM 3 C C MET . . . E 3 -14.353 -24.719 5.903 1 22.87 ? C MET 501 B 1 HETATM 4 O O MET . . . E 3 -15.566 -24.561 6.131 1 23.17 ? O MET 501 B 1 HETATM 5 C CB MET . . . E 3 -12.208 -23.448 6.168 1 22.33 ? CB MET 501 B 1 HETATM 6 C CG MET . . . E 3 -11.294 -24.625 5.887 1 23.79 ? CG MET 501 B 1 HETATM 7 S SD MET . . . E 3 -9.623 -24.311 6.462 1 24.42 ? SD MET 501 B 1 HETATM 8 C CE MET . . . E 3 -8.993 -23.364 5.053 1 22.32 ? CE MET 501 B 1 HETATM 9 O OXT MET . . . E 3 -13.773 -25.818 6.032 1 25.12 ? OXT MET 501 B 1 # _model_server_stats.io_time_ms 44 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 419 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 9 #