data_1IOC # _model_server_result.job_id pWkKTp04Muu_V7uoir_TJg _model_server_result.datetime_utc '2025-03-05 19:15:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1ioc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":902}' # _entry.id 1IOC # _exptl.entry_id 1IOC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1IOC _cell.length_a 90.12 _cell.length_b 90.12 _cell.length_c 92.64 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1IOC _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 10 A CYS 6 1_555 A SG CYS 132 A CYS 128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 A SG CYS 34 A CYS 30 1_555 A SG CYS 120 A CYS 116 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? disulf ? disulf3 A SG CYS 69 A CYS 65 1_555 A SG CYS 85 A CYS 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? disulf ? disulf4 A SG CYS 81 A CYS 77 1_555 A SG CYS 99 A CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? metalc ? metalc1 A OE1 GLU 8 A GLU 4 1_555 D NA NA . A NA 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.102 ? metalc ? metalc2 A OE1 GLU 11 A GLU 7 1_555 C NA NA . A NA 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.44 ? metalc ? metalc3 A OE2 GLU 11 A GLU 7 1_555 C NA NA . A NA 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.334 ? metalc ? metalc4 A OE2 GLU 11 A GLU 7 8_675 C NA NA . A NA 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.131 ? metalc ? metalc5 E O HOH . A HOH 416 1_555 C NA NA . A NA 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1IOC _atom_sites.fract_transf_matrix[1][1] 0.011096 _atom_sites.fract_transf_matrix[1][2] 0.006406 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012813 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010794 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NA A 1 901 901 NA NA . C 2 NA A 1 902 902 NA NA . D 2 NA A 1 903 903 NA NA . E 3 HOH A 1 131 131 HOH TIP . E 3 HOH A 2 132 132 HOH TIP . E 3 HOH A 3 133 133 HOH TIP . E 3 HOH A 4 134 134 HOH TIP . E 3 HOH A 5 135 135 HOH TIP . E 3 HOH A 6 136 136 HOH TIP . E 3 HOH A 7 137 137 HOH TIP . E 3 HOH A 8 138 138 HOH TIP . E 3 HOH A 9 139 139 HOH TIP . E 3 HOH A 10 140 140 HOH TIP . E 3 HOH A 11 142 142 HOH TIP . E 3 HOH A 12 143 143 HOH TIP . E 3 HOH A 13 144 144 HOH TIP . E 3 HOH A 14 145 145 HOH TIP . E 3 HOH A 15 146 146 HOH TIP . E 3 HOH A 16 147 147 HOH TIP . E 3 HOH A 17 148 148 HOH TIP . E 3 HOH A 18 150 150 HOH TIP . E 3 HOH A 19 151 151 HOH TIP . E 3 HOH A 20 154 154 HOH TIP . E 3 HOH A 21 156 156 HOH TIP . E 3 HOH A 22 157 157 HOH TIP . E 3 HOH A 23 158 158 HOH TIP . E 3 HOH A 24 161 161 HOH TIP . E 3 HOH A 25 165 165 HOH TIP . E 3 HOH A 26 167 167 HOH TIP . E 3 HOH A 27 168 168 HOH TIP . E 3 HOH A 28 169 169 HOH TIP . E 3 HOH A 29 173 173 HOH TIP . E 3 HOH A 30 177 177 HOH TIP . E 3 HOH A 31 179 179 HOH TIP . E 3 HOH A 32 180 180 HOH TIP . E 3 HOH A 33 181 181 HOH TIP . E 3 HOH A 34 183 183 HOH TIP . E 3 HOH A 35 184 184 HOH TIP . E 3 HOH A 36 185 185 HOH TIP . E 3 HOH A 37 186 186 HOH TIP . E 3 HOH A 38 200 200 HOH TIP . E 3 HOH A 39 203 203 HOH TIP . E 3 HOH A 40 207 207 HOH TIP . E 3 HOH A 41 211 211 HOH TIP . E 3 HOH A 42 212 212 HOH TIP . E 3 HOH A 43 213 213 HOH TIP . E 3 HOH A 44 217 217 HOH TIP . E 3 HOH A 45 225 225 HOH TIP . E 3 HOH A 46 230 230 HOH TIP . E 3 HOH A 47 233 233 HOH TIP . E 3 HOH A 48 238 238 HOH TIP . E 3 HOH A 49 248 248 HOH TIP . E 3 HOH A 50 251 251 HOH TIP . E 3 HOH A 51 258 258 HOH TIP . E 3 HOH A 52 259 259 HOH TIP . E 3 HOH A 53 260 260 HOH TIP . E 3 HOH A 54 261 261 HOH TIP . E 3 HOH A 55 262 262 HOH TIP . E 3 HOH A 56 263 263 HOH TIP . E 3 HOH A 57 265 265 HOH TIP . E 3 HOH A 58 266 266 HOH TIP . E 3 HOH A 59 267 267 HOH TIP . E 3 HOH A 60 270 270 HOH TIP . E 3 HOH A 61 272 272 HOH TIP . E 3 HOH A 62 278 278 HOH TIP . E 3 HOH A 63 282 282 HOH TIP . E 3 HOH A 64 291 291 HOH TIP . E 3 HOH A 65 306 306 HOH TIP . E 3 HOH A 66 310 310 HOH TIP . E 3 HOH A 67 313 313 HOH TIP . E 3 HOH A 68 315 315 HOH TIP . E 3 HOH A 69 333 333 HOH TIP . E 3 HOH A 70 340 340 HOH TIP . E 3 HOH A 71 342 342 HOH TIP . E 3 HOH A 72 343 343 HOH TIP . E 3 HOH A 73 345 345 HOH TIP . E 3 HOH A 74 353 353 HOH TIP . E 3 HOH A 75 365 365 HOH TIP . E 3 HOH A 76 368 368 HOH TIP . E 3 HOH A 77 370 370 HOH TIP . E 3 HOH A 78 374 374 HOH TIP . E 3 HOH A 79 377 377 HOH TIP . E 3 HOH A 80 379 379 HOH TIP . E 3 HOH A 81 381 381 HOH TIP . E 3 HOH A 82 389 389 HOH TIP . E 3 HOH A 83 416 416 HOH TIP . E 3 HOH A 84 420 420 HOH TIP . E 3 HOH A 85 432 432 HOH TIP . E 3 HOH A 86 441 441 HOH TIP . E 3 HOH A 87 445 445 HOH TIP . E 3 HOH A 88 463 463 HOH TIP . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 9.548 _atom_site.Cartn_y 78.735 _atom_site.Cartn_z -0.259 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 2 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 902 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 216 _model_server_stats.encode_time_ms 17 _model_server_stats.element_count 1 #