data_1IQ5 # _model_server_result.job_id e-m-60RR2J4T0YVLeooXaw _model_server_result.datetime_utc '2024-12-26 12:24:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1iq5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":362}' # _entry.id 1IQ5 # _exptl.entry_id 1IQ5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1IQ5 _cell.length_a 77.09 _cell.length_b 84.4 _cell.length_c 59.25 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1IQ5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 21 A ASP 20 1_555 C CA CA . A CA 361 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.433 ? metalc ? metalc2 A OD1 ASP 23 A ASP 22 1_555 C CA CA . A CA 361 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.48 ? metalc ? metalc3 A OD1 ASP 25 A ASP 24 1_555 C CA CA . A CA 361 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.523 ? metalc ? metalc4 A O THR 27 A THR 26 1_555 C CA CA . A CA 361 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.389 ? metalc ? metalc5 A OE1 GLU 32 A GLU 31 1_555 C CA CA . A CA 361 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.658 ? metalc ? metalc6 A OE2 GLU 32 A GLU 31 1_555 C CA CA . A CA 361 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.512 ? metalc ? metalc7 A OD1 ASP 57 A ASP 56 1_555 D CA CA . A CA 362 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.393 ? metalc ? metalc8 A OD2 ASP 59 A ASP 58 1_555 D CA CA . A CA 362 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.497 ? metalc ? metalc9 A OD1 ASN 61 A ASN 60 1_555 D CA CA . A CA 362 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.482 ? metalc ? metalc10 A O THR 63 A THR 62 1_555 D CA CA . A CA 362 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.455 ? metalc ? metalc11 A OE1 GLU 68 A GLU 67 1_555 D CA CA . A CA 362 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.597 ? metalc ? metalc12 A OE2 GLU 68 A GLU 67 1_555 D CA CA . A CA 362 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.581 ? metalc ? metalc13 A OD1 ASP 94 A ASP 93 1_555 E CA CA . A CA 363 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.582 ? metalc ? metalc14 A OD1 ASP 96 A ASP 95 1_555 E CA CA . A CA 363 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.677 ? metalc ? metalc15 A OD1 ASN 98 A ASN 97 1_555 E CA CA . A CA 363 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.787 ? metalc ? metalc16 A O TYR 100 A TYR 99 1_555 E CA CA . A CA 363 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.443 ? metalc ? metalc17 A OE1 GLU 105 A GLU 104 1_555 E CA CA . A CA 363 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.672 ? metalc ? metalc18 A OE2 GLU 105 A GLU 104 1_555 E CA CA . A CA 363 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.65 ? metalc ? metalc19 A OD1 ASP 130 A ASP 129 1_555 F CA CA . A CA 364 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.578 ? metalc ? metalc20 A OD1 ASP 132 A ASP 131 1_555 F CA CA . A CA 364 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.645 ? metalc ? metalc21 A OD2 ASP 134 A ASP 133 1_555 F CA CA . A CA 364 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.612 ? metalc ? metalc22 A O GLN 136 A GLN 135 1_555 F CA CA . A CA 364 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.504 ? metalc ? metalc23 A OE2 GLU 141 A GLU 140 1_555 F CA CA . A CA 364 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.621 ? metalc ? metalc24 A OE1 GLU 141 A GLU 140 1_555 F CA CA . A CA 364 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.646 ? metalc ? metalc25 C CA CA . A CA 361 1_555 G O HOH . A HOH 467 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.513 ? metalc ? metalc26 D CA CA . A CA 362 1_555 G O HOH . A HOH 492 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.508 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1IQ5 _atom_sites.fract_transf_matrix[1][1] 0.012972 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011848 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016878 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CA A 1 361 361 CA CA . D 3 CA A 1 362 362 CA CA . E 3 CA A 1 363 363 CA CA . F 3 CA A 1 364 364 CA CA . G 4 HOH A 1 461 461 HOH HOH . G 4 HOH A 2 462 462 HOH HOH . G 4 HOH A 3 463 463 HOH HOH . G 4 HOH A 4 464 464 HOH HOH . G 4 HOH A 5 465 465 HOH HOH . G 4 HOH A 6 466 466 HOH HOH . G 4 HOH A 7 467 467 HOH HOH . G 4 HOH A 8 468 468 HOH HOH . G 4 HOH A 9 469 469 HOH HOH . G 4 HOH A 10 471 471 HOH HOH . G 4 HOH A 11 472 472 HOH HOH . G 4 HOH A 12 473 473 HOH HOH . G 4 HOH A 13 474 474 HOH HOH . G 4 HOH A 14 475 475 HOH HOH . G 4 HOH A 15 476 476 HOH HOH . G 4 HOH A 16 477 477 HOH HOH . G 4 HOH A 17 478 478 HOH HOH . G 4 HOH A 18 479 479 HOH HOH . G 4 HOH A 19 480 480 HOH HOH . G 4 HOH A 20 481 481 HOH HOH . G 4 HOH A 21 482 482 HOH HOH . G 4 HOH A 22 483 483 HOH HOH . G 4 HOH A 23 485 485 HOH HOH . G 4 HOH A 24 486 486 HOH HOH . G 4 HOH A 25 487 487 HOH HOH . G 4 HOH A 26 488 488 HOH HOH . G 4 HOH A 27 489 489 HOH HOH . G 4 HOH A 28 490 490 HOH HOH . G 4 HOH A 29 491 491 HOH HOH . G 4 HOH A 30 492 492 HOH HOH . G 4 HOH A 31 494 494 HOH HOH . G 4 HOH A 32 495 495 HOH HOH . G 4 HOH A 33 496 496 HOH HOH . G 4 HOH A 34 497 497 HOH HOH . G 4 HOH A 35 498 498 HOH HOH . G 4 HOH A 36 499 499 HOH HOH . G 4 HOH A 37 500 500 HOH HOH . G 4 HOH A 38 501 501 HOH HOH . G 4 HOH A 39 502 502 HOH HOH . G 4 HOH A 40 503 503 HOH HOH . G 4 HOH A 41 504 504 HOH HOH . G 4 HOH A 42 505 505 HOH HOH . G 4 HOH A 43 506 506 HOH HOH . G 4 HOH A 44 507 507 HOH HOH . G 4 HOH A 45 508 508 HOH HOH . G 4 HOH A 46 509 509 HOH HOH . G 4 HOH A 47 510 510 HOH HOH . G 4 HOH A 48 511 511 HOH HOH . G 4 HOH A 49 512 512 HOH HOH . G 4 HOH A 50 513 513 HOH HOH . G 4 HOH A 51 515 515 HOH HOH . G 4 HOH A 52 516 516 HOH HOH . G 4 HOH A 53 517 517 HOH HOH . G 4 HOH A 54 518 518 HOH HOH . G 4 HOH A 55 519 519 HOH HOH . G 4 HOH A 56 520 520 HOH HOH . G 4 HOH A 57 522 522 HOH HOH . G 4 HOH A 58 523 523 HOH HOH . G 4 HOH A 59 524 524 HOH HOH . G 4 HOH A 60 525 525 HOH HOH . G 4 HOH A 61 526 526 HOH HOH . G 4 HOH A 62 527 527 HOH HOH . H 4 HOH B 1 470 470 HOH HOH . H 4 HOH B 2 484 484 HOH HOH . H 4 HOH B 3 493 493 HOH HOH . H 4 HOH B 4 514 514 HOH HOH . H 4 HOH B 5 521 521 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x -5.282 _atom_site.Cartn_y 6.258 _atom_site.Cartn_z 8.785 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 15.67 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 362 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #