data_1IQG # _model_server_result.job_id m5RmcsdV0F0l0dS1BRVtOg _model_server_result.datetime_utc '2024-12-21 16:56:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1iqg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":401}' # _entry.id 1IQG # _exptl.entry_id 1IQG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 542.05 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-[(6-CHLORO-2-NAPHTHALENYL)SULFONYL]-1-[[4-HYDROXYIMINOMETHYL-1-(4-PYRIDINYL)-4-PIPERIDINYL]METHYL]PIPERAZINONE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1IQG _cell.length_a 72.26 _cell.length_b 78.6 _cell.length_c 56.36 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1IQG _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 7 A CYS 22 1_555 A SG CYS 12 A CYS 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf2 A SG CYS 27 A CYS 42 1_555 A SG CYS 43 A CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf3 A SG CYS 108 A CYS 122 1_555 B SG CYS 89 L CYS 132 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf4 A SG CYS 156 A CYS 168 1_555 A SG CYS 170 A CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? disulf ? disulf5 A SG CYS 181 A CYS 191 1_555 A SG CYS 209 A CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf6 B SG CYS 46 L CYS 89 1_555 B SG CYS 57 L CYS 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf7 B SG CYS 53 L CYS 96 1_555 B SG CYS 66 L CYS 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf8 B SG CYS 68 L CYS 111 1_555 B SG CYS 81 L CYS 124 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? metalc ? metalc1 A OD1 ASP 56 A ASP 70 1_555 C CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.878 ? metalc ? metalc2 A O ASN 58 A ASN 72 1_555 C CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.747 ? metalc ? metalc3 A OE1 GLU 66 A GLU 80 1_555 C CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.832 ? # _chem_comp.formula 'C26 H28 Cl N5 O4 S' _chem_comp.formula_weight 542.05 _chem_comp.id XME _chem_comp.mon_nstd_flag . _chem_comp.name 4-[(6-CHLORO-2-NAPHTHALENYL)SULFONYL]-1-[[4-HYDROXYIMINOMETHYL-1-(4-PYRIDINYL)-4-PIPERIDINYL]METHYL]PIPERAZINONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 XME sing 376 n y C1 C6 XME doub 377 n y C1 H1 XME sing 378 n n C2 C5 XME doub 379 n y C2 S12 XME sing 380 n n C3 C4 XME doub 381 n y C3 C6 XME sing 382 n y C3 C9 XME sing 383 n y C4 C5 XME sing 384 n y C4 H4 XME sing 385 n n C5 H5 XME sing 386 n n C6 C8 XME sing 387 n y CL7 C11 XME sing 388 n n C8 C10 XME doub 389 n y C8 H8 XME sing 390 n n C9 C11 XME doub 391 n y C9 H9 XME sing 392 n n C10 C11 XME sing 393 n y C10 H10 XME sing 394 n n S12 O13 XME doub 395 n n S12 N17 XME sing 396 n n S12 O21 XME doub 397 n n C14 O15 XME doub 398 n n C14 C16 XME sing 399 n n C14 N20 XME sing 400 n n C16 N17 XME sing 401 n n C16 H161 XME sing 402 n n C16 H162 XME sing 403 n n N17 C19 XME sing 404 n n C18 C19 XME sing 405 n n C18 N20 XME sing 406 n n C18 H181 XME sing 407 n n C18 H182 XME sing 408 n n C19 H191 XME sing 409 n n C19 H192 XME sing 410 n n N20 C22 XME sing 411 n n C22 C30 XME sing 412 n n C22 H221 XME sing 413 n n C22 H222 XME sing 414 n n C23 C26 XME doub 415 n y C23 N35 XME sing 416 n y C23 H23 XME sing 417 n n N24 C25 XME sing 418 n n N24 C27 XME sing 419 n n N24 C29 XME sing 420 n n C25 C26 XME sing 421 n y C25 C28 XME doub 422 n y C26 H26 XME sing 423 n n C27 C34 XME sing 424 n n C27 H271 XME sing 425 n n C27 H272 XME sing 426 n n C28 C36 XME sing 427 n y C28 H28 XME sing 428 n n C29 C37 XME sing 429 n n C29 H291 XME sing 430 n n C29 H292 XME sing 431 n n C30 C31 XME sing 432 n n C30 C34 XME sing 433 n n C30 C37 XME sing 434 n n C31 N32 XME doub 435 e n C31 H31 XME sing 436 n n N32 O33 XME sing 437 n n O33 H33 XME sing 438 n n C34 H341 XME sing 439 n n C34 H342 XME sing 440 n n N35 C36 XME doub 441 n y C36 H36 XME sing 442 n n C37 H371 XME sing 443 n n C37 H372 XME sing 444 n n # _atom_sites.entry_id 1IQG _atom_sites.fract_transf_matrix[1][1] 0.013839 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012723 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017743 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CA A 1 301 301 CA CA . D 4 XME A 1 401 401 XME XME . E 5 HOH A 1 501 501 HOH HOH . E 5 HOH A 2 502 502 HOH HOH . E 5 HOH A 3 504 504 HOH HOH . E 5 HOH A 4 506 506 HOH HOH . E 5 HOH A 5 507 507 HOH HOH . E 5 HOH A 6 508 508 HOH HOH . E 5 HOH A 7 510 510 HOH HOH . E 5 HOH A 8 511 511 HOH HOH . E 5 HOH A 9 512 512 HOH HOH . E 5 HOH A 10 513 513 HOH HOH . E 5 HOH A 11 515 515 HOH HOH . E 5 HOH A 12 517 517 HOH HOH . E 5 HOH A 13 518 518 HOH HOH . E 5 HOH A 14 519 519 HOH HOH . E 5 HOH A 15 520 520 HOH HOH . E 5 HOH A 16 521 521 HOH HOH . E 5 HOH A 17 522 522 HOH HOH . E 5 HOH A 18 524 524 HOH HOH . E 5 HOH A 19 525 525 HOH HOH . E 5 HOH A 20 526 526 HOH HOH . E 5 HOH A 21 527 527 HOH HOH . E 5 HOH A 22 528 528 HOH HOH . E 5 HOH A 23 529 529 HOH HOH . E 5 HOH A 24 530 530 HOH HOH . E 5 HOH A 25 531 531 HOH HOH . E 5 HOH A 26 533 533 HOH HOH . E 5 HOH A 27 535 535 HOH HOH . E 5 HOH A 28 536 536 HOH HOH . E 5 HOH A 29 537 537 HOH HOH . E 5 HOH A 30 538 538 HOH HOH . E 5 HOH A 31 539 539 HOH HOH . E 5 HOH A 32 540 540 HOH HOH . E 5 HOH A 33 541 541 HOH HOH . E 5 HOH A 34 542 542 HOH HOH . E 5 HOH A 35 543 543 HOH HOH . E 5 HOH A 36 544 544 HOH HOH . E 5 HOH A 37 545 545 HOH HOH . E 5 HOH A 38 546 546 HOH HOH . E 5 HOH A 39 547 547 HOH HOH . E 5 HOH A 40 548 548 HOH HOH . E 5 HOH A 41 549 549 HOH HOH . E 5 HOH A 42 551 551 HOH HOH . E 5 HOH A 43 552 552 HOH HOH . E 5 HOH A 44 554 554 HOH HOH . E 5 HOH A 45 555 555 HOH HOH . E 5 HOH A 46 556 556 HOH HOH . E 5 HOH A 47 558 558 HOH HOH . E 5 HOH A 48 559 559 HOH HOH . E 5 HOH A 49 560 560 HOH HOH . E 5 HOH A 50 562 562 HOH HOH . E 5 HOH A 51 564 564 HOH HOH . E 5 HOH A 52 565 565 HOH HOH . E 5 HOH A 53 566 566 HOH HOH . E 5 HOH A 54 568 568 HOH HOH . E 5 HOH A 55 569 569 HOH HOH . E 5 HOH A 56 571 571 HOH HOH . E 5 HOH A 57 572 572 HOH HOH . E 5 HOH A 58 573 573 HOH HOH . E 5 HOH A 59 574 574 HOH HOH . E 5 HOH A 60 575 575 HOH HOH . E 5 HOH A 61 577 577 HOH HOH . E 5 HOH A 62 578 578 HOH HOH . E 5 HOH A 63 579 579 HOH HOH . E 5 HOH A 64 580 580 HOH HOH . E 5 HOH A 65 581 581 HOH HOH . E 5 HOH A 66 585 585 HOH HOH . E 5 HOH A 67 586 586 HOH HOH . E 5 HOH A 68 590 590 HOH HOH . E 5 HOH A 69 591 591 HOH HOH . E 5 HOH A 70 593 593 HOH HOH . F 5 HOH L 1 503 503 HOH HOH . F 5 HOH L 2 505 505 HOH HOH . F 5 HOH L 3 509 509 HOH HOH . F 5 HOH L 4 514 514 HOH HOH . F 5 HOH L 5 516 516 HOH HOH . F 5 HOH L 6 523 523 HOH HOH . F 5 HOH L 7 532 532 HOH HOH . F 5 HOH L 8 534 534 HOH HOH . F 5 HOH L 9 550 550 HOH HOH . F 5 HOH L 10 553 553 HOH HOH . F 5 HOH L 11 557 557 HOH HOH . F 5 HOH L 12 561 561 HOH HOH . F 5 HOH L 13 563 563 HOH HOH . F 5 HOH L 14 567 567 HOH HOH . F 5 HOH L 15 570 570 HOH HOH . F 5 HOH L 16 576 576 HOH HOH . F 5 HOH L 17 582 582 HOH HOH . F 5 HOH L 18 583 583 HOH HOH . F 5 HOH L 19 584 584 HOH HOH . F 5 HOH L 20 587 587 HOH HOH . F 5 HOH L 21 588 588 HOH HOH . F 5 HOH L 22 589 589 HOH HOH . F 5 HOH L 23 592 592 HOH HOH . F 5 HOH L 24 594 594 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 XME . . . D 4 8.251 25.443 7.987 1 24.3 ? C1 XME 401 A 1 HETATM 2 C C2 XME . . . D 4 8.854 24.164 7.622 1 25.6 ? C2 XME 401 A 1 HETATM 3 C C3 XME . . . D 4 8.412 24.781 10.506 1 22.33 ? C3 XME 401 A 1 HETATM 4 C C4 XME . . . D 4 9.021 23.488 10.107 1 24.55 ? C4 XME 401 A 1 HETATM 5 C C5 XME . . . D 4 9.232 23.194 8.706 1 22.59 ? C5 XME 401 A 1 HETATM 6 C C6 XME . . . D 4 8.009 25.807 9.387 1 23.12 ? C6 XME 401 A 1 HETATM 7 CL CL7 XME . . . D 4 7.299 26.789 13.936 1 30.02 ? CL7 XME 401 A 1 HETATM 8 C C8 XME . . . D 4 7.399 27.101 9.784 1 20.7 ? C8 XME 401 A 1 HETATM 9 C C9 XME . . . D 4 8.17 25.137 11.888 1 22.93 ? C9 XME 401 A 1 HETATM 10 C C10 XME . . . D 4 7.19 27.386 11.185 1 23.32 ? C10 XME 401 A 1 HETATM 11 C C11 XME . . . D 4 7.571 26.411 12.246 1 23.9 ? C11 XME 401 A 1 HETATM 12 S S12 XME . . . D 4 9.094 23.783 5.938 1 28.13 ? S12 XME 401 A 1 HETATM 13 O O13 XME . . . D 4 9.248 25.093 5.112 1 25.7 ? O13 XME 401 A 1 HETATM 14 C C14 XME . . . D 4 5.23 22.817 4.597 1 32.09 ? C14 XME 401 A 1 HETATM 15 O O15 XME . . . D 4 4.271 23.488 4.17 1 30.85 ? O15 XME 401 A 1 HETATM 16 C C16 XME . . . D 4 6.463 23.621 5.132 1 30.99 ? C16 XME 401 A 1 HETATM 17 N N17 XME . . . D 4 7.731 22.863 5.361 1 28.2 ? N17 XME 401 A 1 HETATM 18 C C18 XME . . . D 4 6.524 20.614 5.19 1 33.8 ? C18 XME 401 A 1 HETATM 19 C C19 XME . . . D 4 7.531 21.5 5.979 1 29.06 ? C19 XME 401 A 1 HETATM 20 N N20 XME . . . D 4 5.309 21.342 4.653 1 33.68 ? N20 XME 401 A 1 HETATM 21 O O21 XME . . . D 4 10.326 22.908 5.726 1 26.56 ? O21 XME 401 A 1 HETATM 22 C C22 XME . . . D 4 4.194 20.46 4.183 1 38.12 ? C22 XME 401 A 1 HETATM 23 C C23 XME . . . D 4 -0.429 17.91 10.831 1 53.98 ? C23 XME 401 A 1 HETATM 24 N N24 XME . . . D 4 1.659 18.479 7.517 1 47.92 ? N24 XME 401 A 1 HETATM 25 C C25 XME . . . D 4 0.705 17.883 8.541 1 49.35 ? C25 XME 401 A 1 HETATM 26 C C26 XME . . . D 4 0.495 18.517 9.884 1 51.13 ? C26 XME 401 A 1 HETATM 27 C C27 XME . . . D 4 1.865 17.798 6.119 1 45.62 ? C27 XME 401 A 1 HETATM 28 C C28 XME . . . D 4 -0.079 16.627 8.265 1 50.94 ? C28 XME 401 A 1 HETATM 29 C C29 XME . . . D 4 2.454 19.779 7.829 1 46.75 ? C29 XME 401 A 1 HETATM 30 C C30 XME . . . D 4 2.978 20.078 5.159 1 41.94 ? C30 XME 401 A 1 HETATM 31 C C31 XME . . . D 4 1.71 20.87 4.664 1 40.35 ? C31 XME 401 A 1 HETATM 32 N N32 XME . . . D 4 1.475 22.091 4.946 1 40.79 ? N32 XME 401 A 1 HETATM 33 O O33 XME . . . D 4 1.119 22.962 4.042 1 41.79 ? O33 XME 401 A 1 HETATM 34 C C34 XME . . . D 4 2.781 18.503 5.04 1 40.9 ? C34 XME 401 A 1 HETATM 35 N N35 XME . . . D 4 -1.14 16.741 10.534 1 55.05 ? N35 XME 401 A 1 HETATM 36 C C36 XME . . . D 4 -0.975 16.111 9.287 1 53.55 ? C36 XME 401 A 1 HETATM 37 C C37 XME . . . D 4 3.336 20.434 6.697 1 43.05 ? C37 XME 401 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 37 #